BLASTX nr result
ID: Rehmannia24_contig00002723
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00002723
(306 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise... 198 5e-49
gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrh... 197 9e-49
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode... 192 3e-47
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ... 188 6e-46
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a... 186 4e-45
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub... 186 4e-45
emb|CBI21137.3| unnamed protein product [Vitis vinifera] 185 5e-45
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub... 185 5e-45
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub... 185 6e-45
gb|EOY29337.1| DNA-directed RNA polymerase isoform 2 [Theobroma ... 184 1e-44
gb|EOY29336.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 184 1e-44
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr... 184 1e-44
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a... 182 3e-44
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub... 182 3e-44
gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptid... 182 3e-44
gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus n... 182 4e-44
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [... 181 7e-44
ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D sub... 177 1e-42
ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D sub... 177 1e-42
gb|EMJ26641.1| hypothetical protein PRUPE_ppa000410mg [Prunus pe... 177 1e-42
>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
Length = 1205
Score = 198 bits (504), Expect = 5e-49
Identities = 93/99 (93%), Positives = 96/99 (96%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKC N+ANVIQR V GGRK+RGPYC
Sbjct: 1107 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCKNMANVIQRPVFGGRKVRGPYC 1166
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTE+C
Sbjct: 1167 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTEIC 1205
>gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrhinum majus]
Length = 821
Score = 197 bits (502), Expect = 9e-49
Identities = 92/99 (92%), Positives = 97/99 (97%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGAAANLHERLFTLSDSSQMH+CRKC N+ANVIQR+V GGRKIRGPYC
Sbjct: 723 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHVCRKCQNMANVIQRSVFGGRKIRGPYC 782
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
RFC+SVEDVVR+NVPYGAKLLCQELFSMGISLKFDTELC
Sbjct: 783 RFCDSVEDVVRLNVPYGAKLLCQELFSMGISLKFDTELC 821
>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
Length = 1019
Score = 192 bits (489), Expect = 3e-47
Identities = 91/98 (92%), Positives = 96/98 (97%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNN+ANVIQRAV GGRKIRGPYC
Sbjct: 921 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNIANVIQRAVPGGRKIRGPYC 980
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTEL 11
RFCESVE++VRVNVPYGAKLL QELFSMGI++KFDTEL
Sbjct: 981 RFCESVEEIVRVNVPYGAKLLAQELFSMGITMKFDTEL 1018
>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
subunit, putative [Ricinus communis]
Length = 1203
Score = 188 bits (478), Expect = 6e-46
Identities = 88/99 (88%), Positives = 95/99 (95%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGA+ANLHERLFTLSDSSQMHIC+KC NVANVIQRAV GGRKIRGPYC
Sbjct: 1105 KFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQKCKNVANVIQRAVPGGRKIRGPYC 1164
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
R CESV+++V+VNVPYGAKLLCQELFSMGISLKF+T LC
Sbjct: 1165 RVCESVDEIVKVNVPYGAKLLCQELFSMGISLKFETRLC 1203
>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Solanum tuberosum]
Length = 1217
Score = 186 bits (471), Expect = 4e-45
Identities = 88/99 (88%), Positives = 94/99 (94%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHIC KC N+ANVIQR V GG K+RGP+C
Sbjct: 1120 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQGG-KVRGPFC 1178
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
RFCESVED+V+VNVPYGAKLLCQELFSMGISLKFDTE+C
Sbjct: 1179 RFCESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 1217
>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
lycopersicum]
Length = 1217
Score = 186 bits (471), Expect = 4e-45
Identities = 88/99 (88%), Positives = 94/99 (94%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHIC KC N+ANVIQR V GG K+RGP+C
Sbjct: 1120 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQGG-KVRGPFC 1178
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
RFCESVED+V+VNVPYGAKLLCQELFSMGISLKFDTE+C
Sbjct: 1179 RFCESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 1217
>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
Length = 1220
Score = 185 bits (470), Expect = 5e-45
Identities = 83/99 (83%), Positives = 95/99 (95%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGAAANLHERLFTLSDS+ MHICR+C N++NVIQR+V GGRK+RGPYC
Sbjct: 1122 KFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYC 1181
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
R+CES E++V+VNVPYGAKLLCQELFSMGISLKF+T+LC
Sbjct: 1182 RYCESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQLC 1220
>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
vinifera]
Length = 1198
Score = 185 bits (470), Expect = 5e-45
Identities = 83/99 (83%), Positives = 95/99 (95%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGAAANLHERLFTLSDS+ MHICR+C N++NVIQR+V GGRK+RGPYC
Sbjct: 1100 KFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYC 1159
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
R+CES E++V+VNVPYGAKLLCQELFSMGISLKF+T+LC
Sbjct: 1160 RYCESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQLC 1198
>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
sativus]
Length = 1197
Score = 185 bits (469), Expect = 6e-45
Identities = 84/99 (84%), Positives = 95/99 (95%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGA+ANLHERLFTLSDSSQMH+C+KC NVA+VIQR+V GGRK+RGPYC
Sbjct: 1099 KFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKMRGPYC 1158
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
R CES +D+VRVNVPYGAKLLCQELFSMGI+LKF+T+LC
Sbjct: 1159 RVCESFDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1197
>gb|EOY29337.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
Length = 961
Score = 184 bits (467), Expect = 1e-44
Identities = 85/99 (85%), Positives = 94/99 (94%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGA+ANLHERL TLSDSSQMH+CR C NVANVI+RAV GGRKIRGPYC
Sbjct: 863 KFGEMERDCLIAHGASANLHERLVTLSDSSQMHVCRNCKNVANVIERAVPGGRKIRGPYC 922
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
R C+SV+D+VRVNVPYGAKLLCQELFSMGI+LKF+T+LC
Sbjct: 923 RGCQSVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 961
>gb|EOY29336.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 1184
Score = 184 bits (467), Expect = 1e-44
Identities = 85/99 (85%), Positives = 94/99 (94%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGA+ANLHERL TLSDSSQMH+CR C NVANVI+RAV GGRKIRGPYC
Sbjct: 1086 KFGEMERDCLIAHGASANLHERLVTLSDSSQMHVCRNCKNVANVIERAVPGGRKIRGPYC 1145
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
R C+SV+D+VRVNVPYGAKLLCQELFSMGI+LKF+T+LC
Sbjct: 1146 RGCQSVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1184
>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
RNA polymerases IV and V subunit 2-like [Citrus sinensis]
gi|557545145|gb|ESR56123.1| hypothetical protein
CICLE_v10018562mg [Citrus clementina]
Length = 1198
Score = 184 bits (466), Expect = 1e-44
Identities = 85/99 (85%), Positives = 91/99 (91%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGAAANLHERLFTLSDS QMHICRKC NVANVIQR V GGRK+RGPYC
Sbjct: 1100 KFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQRVVGGGRKVRGPYC 1159
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
R C+S +D+V+ NVPYGAKLLCQELFSMGI+LKFDTE C
Sbjct: 1160 RICDSGDDIVKANVPYGAKLLCQELFSMGITLKFDTEFC 1198
>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Solanum tuberosum]
Length = 1219
Score = 182 bits (463), Expect = 3e-44
Identities = 87/99 (87%), Positives = 94/99 (94%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHIC KC N+ANVIQR+ GG KIRGP+C
Sbjct: 1122 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAPGG-KIRGPFC 1180
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
RFCESVED+V+V+VPYGAKLLCQELFSMGISLKFDTE+C
Sbjct: 1181 RFCESVEDIVKVDVPYGAKLLCQELFSMGISLKFDTEIC 1219
>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
lycopersicum]
Length = 1219
Score = 182 bits (463), Expect = 3e-44
Identities = 87/99 (87%), Positives = 93/99 (93%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHIC KC N+ANVIQR V GG K+RGP+C
Sbjct: 1122 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRPVPGG-KVRGPFC 1180
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
RFCESVED+V+V VPYGAKLLCQELFSMGISLKFDTE+C
Sbjct: 1181 RFCESVEDIVKVGVPYGAKLLCQELFSMGISLKFDTEIC 1219
>gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptide, putative
[Solanum bulbocastanum]
Length = 304
Score = 182 bits (463), Expect = 3e-44
Identities = 87/99 (87%), Positives = 94/99 (94%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHIC KC N+ANVIQR+ GG KIRGP+C
Sbjct: 207 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAPGG-KIRGPFC 265
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
RFCESVED+V+V+VPYGAKLLCQELFSMGISLKFDTE+C
Sbjct: 266 RFCESVEDIVKVDVPYGAKLLCQELFSMGISLKFDTEIC 304
>gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus notabilis]
Length = 1196
Score = 182 bits (462), Expect = 4e-44
Identities = 79/99 (79%), Positives = 95/99 (95%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCL+AHGA+ANLHERLFTLSDSSQMHIC +C+NVAN+IQR+++GGRK+RGPYC
Sbjct: 1098 KFGEMERDCLLAHGASANLHERLFTLSDSSQMHICHRCHNVANIIQRSLMGGRKVRGPYC 1157
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
R C+S +D+VRVNVPYGAKLLCQELF+MGI+LKF+T +C
Sbjct: 1158 RICKSADDIVRVNVPYGAKLLCQELFTMGINLKFETRIC 1196
>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1181
Score = 181 bits (460), Expect = 7e-44
Identities = 85/98 (86%), Positives = 93/98 (94%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGA+ANLHERLFTLSDSS+MHIC+KC NVANVIQR V GGRKIRGPYC
Sbjct: 1083 KFGEMERDCLIAHGASANLHERLFTLSDSSEMHICQKCKNVANVIQRGVPGGRKIRGPYC 1142
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTEL 11
R CESV+D+V+V+VPYGAKLLCQELFSMGISLKFDT +
Sbjct: 1143 RVCESVDDLVKVSVPYGAKLLCQELFSMGISLKFDTRV 1180
>ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cicer
arietinum]
Length = 1199
Score = 177 bits (450), Expect = 1e-42
Identities = 83/99 (83%), Positives = 91/99 (91%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGA+ANL+ERLFTLSDSSQ+HIC KC NVANVI R V GGRKIRGPYC
Sbjct: 1101 KFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGRKIRGPYC 1160
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
RFCES +D+V +VPYGAKLLCQELFSMGI+LKF+TELC
Sbjct: 1161 RFCESADDIVVAHVPYGAKLLCQELFSMGINLKFETELC 1199
>ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Fragaria
vesca subsp. vesca]
Length = 1201
Score = 177 bits (450), Expect = 1e-42
Identities = 81/99 (81%), Positives = 91/99 (91%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGA+ANLHERLFTLSDSS M++C+KC N ANVI+R + GGRKIRGPYC
Sbjct: 1103 KFGEMERDCLIAHGASANLHERLFTLSDSSLMNVCQKCQNAANVIERKLTGGRKIRGPYC 1162
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
R C+S +D+VRVNVPYGAKLLCQELFSMGISLKF+T LC
Sbjct: 1163 RVCDSADDIVRVNVPYGAKLLCQELFSMGISLKFETRLC 1201
>gb|EMJ26641.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
Length = 1200
Score = 177 bits (450), Expect = 1e-42
Identities = 82/99 (82%), Positives = 90/99 (90%)
Frame = -3
Query: 304 KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQRAVLGGRKIRGPYC 125
KFGEMERDCLIAHGA+ANLHERLFTLSDSSQMH+C+KC NVA VI R V GGRKIRGP+C
Sbjct: 1102 KFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVAYVILRTVAGGRKIRGPHC 1161
Query: 124 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 8
R C+S +D+VRVNVPYGAKLLCQELFSMGISLKF+T C
Sbjct: 1162 RICDSADDLVRVNVPYGAKLLCQELFSMGISLKFETRFC 1200