BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00002620
         (958 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   203   7e-50
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   186   9e-45
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621...   186   1e-44
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]             184   3e-44
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]              184   3e-44
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   184   3e-44
ref|XP_006485550.1| PREDICTED: uncharacterized protein LOC102627...   175   3e-41
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...   172   2e-40
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe...   171   4e-40
ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [S...   171   5e-40
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...   171   5e-40
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...   169   1e-39
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe...   169   2e-39
gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [...   169   2e-39
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...   168   2e-39
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...   168   2e-39
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...   168   3e-39
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...   168   3e-39
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   167   4e-39
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ...   167   7e-39

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  203 bits (517), Expect = 7e-50
 Identities = 112/319 (35%), Positives = 176/319 (55%), Gaps = 1/319 (0%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFN++    EK GG +R   S   F   +    + E+   G +F+W  NR+ E  V+ RL
Sbjct: 136  DFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSGYQFSWYGNRNDE-LVQCRL 194

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHRRFQFDKRWVEHEEIE 362
            DR   +  W   FP+A A  + +  SDH  L I++    N ++   F++DKRWV+ E  +
Sbjct: 195  DRTVANQAWMELFPQAKATYLQKICSDHSPL-INNLVGDNWRKWAGFKYDKRWVQREGFK 253

Query: 363  GLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSL-ASLKTLD 539
             L+ N WS +        ++ K+ +CR E+ KW    K +SA  I+ L   L A+ K + 
Sbjct: 254  DLLCNFWSQQSTKTNALMME-KIASCRREISKWKRVSKPSSAVRIQELQFKLDAATKQIP 312

Query: 540  GDRDWDQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGISQ 719
             DR   +   LK +L+Q YN EE FWQ+KSR+ W++ GD+NTKYFH+    RR  N I +
Sbjct: 313  FDRR--ELARLKKELSQEYNNEEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQK 370

Query: 720  LVSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVCE 899
            L+ +EG    S++D+ +    ++ KLF SE       +L  +   +S ++N  L+ P+ +
Sbjct: 371  LIDEEGREWTSDEDLGRVAEAYFKKLFASEDVGYTVEELENLTPLVSDQMNNNLLAPITK 430

Query: 900  AEIRQALFDLHPHKAPGPD 956
             E+++A F ++PHK PGPD
Sbjct: 431  EEVQRATFSINPHKCPGPD 449


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  186 bits (473), Expect = 9e-45
 Identities = 101/318 (31%), Positives = 164/318 (51%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFN++    EK GG     W    F +F+ +  ++++   G  F+W   R G  F++ERL
Sbjct: 742  DFNEVLDPSEKWGGGPPLPWRIKLFRDFLNNGHLRDLHFKGPGFSWFAMRHGRVFIKERL 801

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHRRFQFDKRWVEHEEIE 362
            DRA G+  W  S P      + +  SDH  LL+D    +  K  R F+F++ W  HEE  
Sbjct: 802  DRALGNIAWSSSQPNTQILHLPKIGSDHRPLLLDSNPKMLNKT-RLFRFEQMWTTHEEYS 860

Query: 363  GLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLDG 542
             +I+ +W     G+AM      + +C   L  WS  K  N +  +  L + +  L   + 
Sbjct: 861  DVIQRSWPPAFGGSAMRSWNRNLLSCGKALKMWSKEKFSNPSVQVADLLSDIEKLHQSNP 920

Query: 543  DRDWDQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGISQL 722
                 Q N L + + + + ++E++W Q+SRVNWLK GD+N+ +FH    QRR  N I +L
Sbjct: 921  PDAHHQINILTDQVTKLWTQDEMYWHQRSRVNWLKLGDQNSSFFHQTTIQRRQYNKIVRL 980

Query: 723  VSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVCEA 902
              D G    SE D+  +   +++ L+ S     ++  L+ +  +++ E+N+ L  PV   
Sbjct: 981  KDDHGNWLDSEADVALQFLDYFTALYQSNGPQQWEEVLDFVDTAVTAEMNKILSSPVSLL 1040

Query: 903  EIRQALFDLHPHKAPGPD 956
            E+++A+FDL   KAPGPD
Sbjct: 1041 EVKKAVFDLGATKAPGPD 1058


>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
          Length = 2303

 Score =  186 bits (472), Expect = 1e-44
 Identities = 108/329 (32%), Positives = 165/329 (50%), Gaps = 11/329 (3%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFN+I +  EK GG  +      +F   ++   + ++   G  FTW+N R G+ F+EERL
Sbjct: 99   DFNEILNLQEKSGGNEKNIDMVVQFREAVQACNLVDVGYRGHPFTWSNRRYGQHFIEERL 158

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRH-----RRFQFDKRWVE 347
            DR   S +W  +F   +A  +    SDHC +L++  E    + H      R  ++  W  
Sbjct: 159  DRFLCSNDWSENFHDMAATNLVNWVSDHCPILMEVRERSKDRSHGKKSIHREHYEDMWSS 218

Query: 348  HEEIEGLIKNAWSIRVIG---NAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSL 518
            +E  + +++N W+    G   N +   Q   KN    L  WS S+  +     + L N L
Sbjct: 219  YEACKNIVRNEWASMGRGARENPVKHFQQAAKNSLANLKIWSKSEFADRKKKQDQLINQL 278

Query: 519  ASLKTLDGDR-DWDQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQR 695
               K     R + DQ   ++N +N     EE++W+Q+SR  WLK GD+NTKYFHS A+ R
Sbjct: 279  IHAKHGSAQRMNGDQIRRIENQINGMLMDEEIYWRQRSRAEWLKEGDRNTKYFHSKASAR 338

Query: 696  RMINGISQLVSDEGMVCASEKDIEKEVTTFYSKLFT--SETQPGFQGQLNGIPQSISPEL 869
            R  N I  + +  G     ++++EKE   ++  LFT  S  Q   Q  L+GI   ++  +
Sbjct: 339  RRKNKIWGIENSHGQWTEDQREVEKEFCEYFQNLFTTSSPNQSQIQDALDGISPKVTTNM 398

Query: 870  NQKLIRPVCEAEIRQALFDLHPHKAPGPD 956
            N +L  P  E EI +AL  + P KAPGPD
Sbjct: 399  NHQLEEPFTEEEIVEALHQMSPTKAPGPD 427


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  184 bits (468), Expect = 3e-44
 Identities = 110/318 (34%), Positives = 166/318 (52%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFNDI  N EK GG  R       FN  I+   + E+P  G  FTWA  R G+ +++ RL
Sbjct: 99   DFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVEMPAHGNGFTWAGRR-GDHWIQCRL 157

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHRRFQFDKRWVEHEEIE 362
            DRAFG+ EW   FP ++   +    SDH  +LI      +  R + F+FDKR++  E+++
Sbjct: 158  DRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLMSSQDSYRGQ-FRFDKRFLFKEDVK 216

Query: 363  GLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLDG 542
              I   WS    G  +  V ++++ CR  L  W     LNS   I  L  +L   ++L  
Sbjct: 217  EAIIRTWSRGKHGTNI-SVADRLRACRKSLSSWKKQNNLNSLDKINQLEAALEKEQSLVW 275

Query: 543  DRDWDQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGISQL 722
               + + + LK DL +AY +EE +W+QKSR  WL++G++N+KYFH+   Q R    I +L
Sbjct: 276  PI-FQRVSVLKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKL 334

Query: 723  VSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVCEA 902
                G +  SE    +    ++  LF S    GF    +G+   +S  +N+ L+  V   
Sbjct: 335  KDVNGNMQTSEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQ 394

Query: 903  EIRQALFDLHPHKAPGPD 956
            EI++A+F + P  APGPD
Sbjct: 395  EIKEAVFSIKPASAPGPD 412


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score =  184 bits (468), Expect = 3e-44
 Identities = 110/318 (34%), Positives = 166/318 (52%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFNDI  N EK GG  R       FN  I+   + E+P  G  FTWA  R G+ +++ RL
Sbjct: 102  DFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVEMPAHGNGFTWAGRR-GDHWIQCRL 160

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHRRFQFDKRWVEHEEIE 362
            DRAFG+ EW   FP ++   +    SDH  +LI      +  R + F+FDKR++  E+++
Sbjct: 161  DRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLMSSQDSYRGQ-FRFDKRFLFKEDVK 219

Query: 363  GLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLDG 542
              I   WS    G  +  V ++++ CR  L  W     LNS   I  L  +L   ++L  
Sbjct: 220  EAIIRTWSRGKHGTNI-SVADRLRACRKSLSSWKKQNNLNSLDKINQLEAALEKEQSLVW 278

Query: 543  DRDWDQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGISQL 722
               + + + LK DL +AY +EE +W+QKSR  WL++G++N+KYFH+   Q R    I +L
Sbjct: 279  PI-FQRVSVLKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKL 337

Query: 723  VSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVCEA 902
                G +  SE    +    ++  LF S    GF    +G+   +S  +N+ L+  V   
Sbjct: 338  KDVNGNMQTSEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQ 397

Query: 903  EIRQALFDLHPHKAPGPD 956
            EI++A+F + P  APGPD
Sbjct: 398  EIKEAVFSIKPASAPGPD 415


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
            gi|7267666|emb|CAB78094.1| RNA-directed DNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  184 bits (468), Expect = 3e-44
 Identities = 106/318 (33%), Positives = 161/318 (50%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFNDI  N EK+GG  R    F  F +F+    + +I   G   +W   R    F++ RL
Sbjct: 80   DFNDILDNSEKQGGPLRWEGFFLAFRSFVSQNGLWDINHTGNSLSWRGTRYSH-FIKSRL 138

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHRRFQFDKRWVEHEEIE 362
            DRA G+  W   FP +  + +    SDH   L+  F     KR + F+FD+R  E EEI 
Sbjct: 139  DRALGNCSWSELFPMSKCEYLRFEGSDH-RPLVTYFGAPPLKRSKPFRFDRRLREKEEIR 197

Query: 363  GLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLDG 542
             L+K  W +    + ++    K+  CR  ++KW+  +  NSA  I+    +L S  + D 
Sbjct: 198  ALVKEVWELARQDSVLY----KISRCRQSIIKWTKEQNSNSAKAIKKAQQALESALSADI 253

Query: 543  DRDWDQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGISQL 722
              D     S+  +L  AY +EE+FW+Q SRV WL +GD+N  YFH+    RRM+N +S +
Sbjct: 254  P-DPSLIGSITQELEAAYRQEELFWKQWSRVQWLNSGDRNKGYFHATTRTRRMLNNLSVI 312

Query: 723  VSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVCEA 902
                G     E+ I   +++++  +FT+      Q     +   IS   N++LI+     
Sbjct: 313  EDGSGQEFHEEEQIASTISSYFQNIFTTSNNSDLQVVQEALSPIISSHCNEELIKISSLL 372

Query: 903  EIRQALFDLHPHKAPGPD 956
            EI++ALF +   KAPGPD
Sbjct: 373  EIKEALFSISADKAPGPD 390


>ref|XP_006485550.1| PREDICTED: uncharacterized protein LOC102627687 [Citrus sinensis]
          Length = 473

 Score =  175 bits (443), Expect = 3e-41
 Identities = 85/322 (26%), Positives = 167/322 (51%), Gaps = 4/322 (1%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFND+ ++ EK+G    P W    F + + D+ + ++ + G +FTW  ++  + ++EERL
Sbjct: 138  DFNDLLNSTEKRGKLVHPNWKLQGFKDVVSDLGLHDLGMEGYQFTWEMSKGNKNWLEERL 197

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHRRFQFDKRWVEHEEIE 362
            D    S  W   FP+A   ++  + SDH  +  D    + + R ++F+F+  W+   + +
Sbjct: 198  DHGLASINWIRLFPQAKVSSLKASCSDHLHIFFDPNPLVYQSRVKKFRFENLWLCEPDCQ 257

Query: 363  GLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLDG 542
             +++++W+     +    +Q+K+  C  +LL+W      +    I      +  L+ L  
Sbjct: 258  PIVQDSWA----SSGNVSIQSKINACGSDLLRWGSYLSRDFHKRIRDCKQRIGVLRGLRD 313

Query: 543  DRDWDQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGISQL 722
                  +   +N  N+  +  E+FW+Q+S+  WLK GD N +YFH++A+ R+  N I +L
Sbjct: 314  VVSLGDFTEARNRYNELLHSHEIFWKQRSKSLWLKEGDLNPRYFHAMASTRKRQNMIGKL 373

Query: 723  VSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPEL----NQKLIRP 890
             + +G  C    +I + +  +++K+F+SE      G  + + Q +  +L    N  L+ P
Sbjct: 374  RNSKGQWCTDPAEINELIGDYFTKIFSSE-----GGSCDEVIQCVEKKLMAGQNHSLMEP 428

Query: 891  VCEAEIRQALFDLHPHKAPGPD 956
               A++R A+F ++P K+P P+
Sbjct: 429  FTTADVRDAIFSMYPDKSPVPN 450


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score =  172 bits (435), Expect = 2e-40
 Identities = 103/318 (32%), Positives = 161/318 (50%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFNDI SN EK GG  R   SF  F + + +  M E+   G  FTW  NR+ + +V+ +L
Sbjct: 135  DFNDIRSNDEKLGGPRRSPSSFQCFEHMLLNCSMHELGSTGNSFTWGGNRNDQ-WVQCKL 193

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHRRFQFDKRWVEHEEIE 362
            DR FG+  W   FP A    + +  SDH  +L+  F + N+    +F++DKR  +     
Sbjct: 194  DRCFGNPAWFSIFPNAHQWFLEKFGSDHRPVLVK-FTNDNELFRGQFRYDKRLDDDPYCI 252

Query: 363  GLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLDG 542
             +I  +W+  +         + ++ CR  +  W  S   N+ + I+ L   L + K++  
Sbjct: 253  EVIHRSWNSAMSQGTHSSFFSLIE-CRRAISVWKHSSDTNAQSRIKRLRKDLDAEKSIQI 311

Query: 543  DRDWDQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGISQL 722
               W +   +K+ L+ AY  EE+FW+QKSR  WL  GDKNT +FH+     R+ N +S L
Sbjct: 312  PC-WPRIEYIKDQLSLAYGDEELFWRQKSRQKWLAGGDKNTGFFHATVHSERLKNELSFL 370

Query: 723  VSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVCEA 902
            + +         D  K  ++F+  LFTS         L G+   ++ E+N  LI+ V E 
Sbjct: 371  LDENDQEFTRNSDKGKIASSFFENLFTSTYILTHNNHLEGLQAKVTSEMNHNLIQEVTEL 430

Query: 903  EIRQALFDLHPHKAPGPD 956
            E+  A+F ++   APGPD
Sbjct: 431  EVYNAVFSINKESAPGPD 448


>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
          Length = 1755

 Score =  171 bits (433), Expect = 4e-40
 Identities = 110/322 (34%), Positives = 156/322 (48%), Gaps = 4/322 (1%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFN+I S  EK+GG  R       F N +  +  +++   G +FTW   R G+GFV  RL
Sbjct: 549  DFNEILSTDEKEGGPLRNNRQMQGFRNIVDKLGFRDLGFNGYKFTW-KCRFGDGFVRVRL 607

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLID-DFEDINKKRHRRFQFDKRWVEHEEI 359
            DRA  +  W   FP  S + +  + SDH  +L+        K R+RRF F+  W  H + 
Sbjct: 608  DRALATTSWQNLFPGFSVQHLDPSRSDHLPILVRIRHATCQKSRYRRFHFEAMWTTHVDC 667

Query: 360  EGLIKNAWSIRVIGNA--MFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASL-K 530
            E  IK  W    +GN   M  +  K+K     L +WS S   +       L   LASL +
Sbjct: 668  EKTIKQVWES--VGNLDPMVGLDKKIKQMTWVLQRWSKSTFGHIKEETRVLRAKLASLFQ 725

Query: 531  TLDGDRDWDQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMING 710
                +R  +    ++  L++   K E++W Q+SR NWLKAGDKNT YFH  AT RR  N 
Sbjct: 726  APYSERVEEDRRVVQKSLDELLAKNELYWCQRSRENWLKAGDKNTSYFHQKATNRRRRNI 785

Query: 711  ISQLVSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRP 890
            I  L    G    S + I   V  ++  LF S      +  L+ +   ++ ++ Q LI  
Sbjct: 786  IKGLEDSNGCWRTSRQGITSIVIDYFGDLFRSSGSSMMEEILSALEPKVTADMQQVLIAD 845

Query: 891  VCEAEIRQALFDLHPHKAPGPD 956
                EI+ A+F + P KAPGPD
Sbjct: 846  FSYQEIKDAVFQMQPSKAPGPD 867


>ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
            gi|241936686|gb|EES09831.1| hypothetical protein
            SORBIDRAFT_05g019526 [Sorghum bicolor]
          Length = 1209

 Score =  171 bits (432), Expect = 5e-40
 Identities = 96/321 (29%), Positives = 160/321 (49%), Gaps = 3/321 (0%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFN++    E  G + R       F   +    + ++   G  +T+    +G  F   RL
Sbjct: 401  DFNEVLHRSEHLGVQERSYAQIAGFREMVDVCGLCDLGYEGRSWTYEKKVTGGSFCRVRL 460

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHRR-FQFDKRWVEHEEI 359
            DRA  + EW   FP A  + I  A+SDH  +++       ++R RR F+++  W  HE+ 
Sbjct: 461  DRALATPEWSARFPLAKVRHITAAASDHGPIVLQWEAAQGRQRQRRQFRYETMWETHEDF 520

Query: 360  EGLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLD 539
              +I   W          ++Q+K+++   +L  W        +  ++ L   L  ++  D
Sbjct: 521  ANVISQTWQRGTKATTAHELQSKLRSVSCKLNHWEVRTFGQVSRELKGLRRELEMMQA-D 579

Query: 540  GDRDWDQWNSLK--NDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGI 713
             +R       LK    + +  ++EE+ W+Q++R+ WL AGDKNT +FH  A++RR  N I
Sbjct: 580  VNRQGPSHVELKIKERIMELNHREELMWKQRARIQWLSAGDKNTHFFHLRASRRRKRNMI 639

Query: 714  SQLVSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPV 893
             +L +  G V    K++ +  T+FY  L+T+E     +  L  +P  ++ E+N KLI P 
Sbjct: 640  VKLKTANGQVTEDRKEMGQMATSFYKLLYTAEGTENMEAVLETVPAKVTTEMNDKLIAPF 699

Query: 894  CEAEIRQALFDLHPHKAPGPD 956
             E EI++ALF + P KAPGPD
Sbjct: 700  SELEIKEALFQMFPTKAPGPD 720


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score =  171 bits (432), Expect = 5e-40
 Identities = 105/316 (33%), Positives = 162/316 (51%)
 Frame = +3

Query: 9   NDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERLDR 188
           N+I  N EK+GG  R   SF  F +FI    + ++   G  F+W   R  + FV +RLDR
Sbjct: 36  NEILDNSEKRGGPPRDQGSFIDFRSFISKNGLWDLKYSGNPFSWRGMRY-DWFVRQRLDR 94

Query: 189 AFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHRRFQFDKRWVEHEEIEGL 368
           A  +  W  SFP   ++ +    SDH  L++   ++   KR  +F+FD R  +++ +  L
Sbjct: 95  AMSNNSWLESFPSGRSEYLRFEGSDHRPLVVF-VDEARVKRRGQFRFDNRLRDNDVVNAL 153

Query: 369 IKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLDGDR 548
           I+  W+    G+A   V  K+  CR E++ W+  + LNSA  IE    +L    T D   
Sbjct: 154 IQETWTNA--GDA--SVLTKMNQCRREIINWTRLQNLNSAELIEKTQKALEEALTADPPN 209

Query: 549 DWDQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGISQLVS 728
                 +L   L  AY  EE FW+Q+SRV WL +GD+NT YFH+V   RR  N ++ +  
Sbjct: 210 P-TTIGALTATLEHAYKLEEQFWKQRSRVLWLHSGDRNTGYFHAVTRNRRTQNRLTVMED 268

Query: 729 DEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVCEAEI 908
             G+    E  I + ++ ++ ++FTSE+   F      I   +S   N  L R   + E+
Sbjct: 269 INGVAQHEEHQISQIISGYFQQIFTSESDGDFSVVDEAIEPMVSQGDNDFLTRIPNDEEV 328

Query: 909 RQALFDLHPHKAPGPD 956
           + A+F ++  KAPGPD
Sbjct: 329 KDAVFSINASKAPGPD 344


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
            thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score =  169 bits (429), Expect = 1e-39
 Identities = 108/319 (33%), Positives = 158/319 (49%), Gaps = 1/319 (0%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFN I  N EK+GG  R   SF  F + +    M E+P +G  FTW   ++ E +++ RL
Sbjct: 138  DFNPILHNGEKRGGPRRGDSSFLPFTDMLDSCDMLELPSIGNPFTWGG-KTNEMWIQSRL 196

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHR-RFQFDKRWVEHEEI 359
            DR FG+  W   FP ++ + + +  SDH  +L+   +   K+ +R  F+FDKR      +
Sbjct: 197  DRCFGNKNWFRFFPISNQEFLDKRGSDHRPVLVRLTK--TKEEYRGNFRFDKRLFNQPNV 254

Query: 360  EGLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLD 539
            +  I  AW+     N    V +K+K+CR  L +W     +NS+T I     +L  L+   
Sbjct: 255  KETIVQAWNGSQ-RNENLLVLDKLKHCRSALSRWKKENNINSSTRITQARAAL-ELEQSS 312

Query: 540  GDRDWDQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGISQ 719
            G    D   SLKNDL +A + EEVFW QKSR  W+ +GDKNT +FH+     R    I Q
Sbjct: 313  GFPRADLVFSLKNDLCKANHDEEVFWSQKSRAKWMHSGDKNTSFFHASVKDNRGKQHIDQ 372

Query: 720  LVSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVCE 899
            L    G+    E +       ++S LF S     F          ++  +N  LI  V +
Sbjct: 373  LCDVNGLFHKDEMNKGAIAEAYFSDLFKSTDPSSFVDLFEDYQPRVTESMNNTLIAAVSK 432

Query: 900  AEIRQALFDLHPHKAPGPD 956
             EIR+A+F +    APG D
Sbjct: 433  NEIREAVFAIRSSSAPGVD 451


>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
          Length = 1275

 Score =  169 bits (427), Expect = 2e-39
 Identities = 107/320 (33%), Positives = 153/320 (47%), Gaps = 2/320 (0%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFN+I S  EK+GG  R       F N +  +  +++   G +FTW   R G+GFV  RL
Sbjct: 95   DFNEILSTDEKEGGPLRNNRQMQGFRNIVDKLGFRDLGFNGYKFTW-KCRFGDGFVRVRL 153

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLID-DFEDINKKRHRRFQFDKRWVEHEEI 359
            DRA  +  W   FP  S + +  + SDH  +L+        K R+ RF F+  W  H + 
Sbjct: 154  DRALATTSWQNLFPGFSVQHLDPSRSDHLPILVRIRHATCQKSRYHRFHFEAMWTTHVDC 213

Query: 360  EGLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASL-KTL 536
            E  IK  W      + M  +  K+K     L +WS S   +       L   LASL +  
Sbjct: 214  EKTIKQVWESVGDLDPMVGLDKKIKQMTWVLQRWSKSTFGHIKEETRVLRAKLASLFQAP 273

Query: 537  DGDRDWDQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGIS 716
              +R  +    ++  L++   K E++W Q+SR NWLKAGDKNT YFH  AT RR  N I 
Sbjct: 274  YSERVEEDRRVVQKSLDELLAKNELYWCQRSRENWLKAGDKNTSYFHQKATNRRRRNIIK 333

Query: 717  QLVSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVC 896
             L    G    S + I   V  ++  LF S      +  L+ +   ++ ++ Q LI    
Sbjct: 334  GLEDSNGCWRTSRQGITSIVIDYFGDLFRSSGSSMMEEILSALEPKVTADMQQVLIADFS 393

Query: 897  EAEIRQALFDLHPHKAPGPD 956
              EI+ A+F + P KAPGPD
Sbjct: 394  YQEIKDAVFQMQPSKAPGPD 413


>gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [Prunus persica]
          Length = 1146

 Score =  169 bits (427), Expect = 2e-39
 Identities = 99/320 (30%), Positives = 167/320 (52%), Gaps = 2/320 (0%)
 Frame = +3

Query: 3   DFNDICSNLEKKGGRSRPAWSFTRF-NNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEER 179
           D N+I  N EK+GG   P W  TR+  +F+    + E+    + +TW N       +  +
Sbjct: 43  DMNEILGNDEKEGGIPWP-WGRTRYLRSFMDTNGLLELRSTSQFYTWENQHDPVSLIRMK 101

Query: 180 LDRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHRRFQFDKRWVEHEEI 359
           LDR   + +W   +P        R  SDH  L++  F    ++R   F+F+  W +  + 
Sbjct: 102 LDRGLINDQWLFLWPDLCVHVEPRVGSDHSPLVLY-FAPKIQRRAGGFKFEAYWADEHDC 160

Query: 360 EGLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLD 539
             +I+  W   ++G++   +   +  CR EL KWS  K  N+ + I  L  SL++L++  
Sbjct: 161 GTIIQRGWKNDIVGDSFAALSANLGVCREELQKWSKEKFPNNLSRINLLMKSLSNLQSGP 220

Query: 540 GDRDW-DQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGIS 716
            + ++  Q +++ ++++  +++EE +W+Q+SR+NWL AGD NTK+FH+   QRR  N I 
Sbjct: 221 LEENYRHQESAIWDEMSVLWSREETYWKQRSRLNWLSAGDANTKFFHTTTLQRRQRNKIE 280

Query: 717 QLVSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVC 896
            L+  EG   + ++ I +E   F+  LF S     + G LN +  SI+   N++L  P  
Sbjct: 281 TLLKSEGNCISGDQAIREEFGIFFGNLFKSGGPRNWGGILNCVHASITEAQNKRLTDPFS 340

Query: 897 EAEIRQALFDLHPHKAPGPD 956
             E+R A+  L   KAPGPD
Sbjct: 341 MEEVRTAVKQLGSLKAPGPD 360


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score =  168 bits (426), Expect = 2e-39
 Identities = 97/318 (30%), Positives = 159/318 (50%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFN+I SN EK GG  R  W+F  F N +    +++I  +G+ F+W   R     V+  L
Sbjct: 517  DFNEILSNNEKIGGPQRDEWTFRGFRNMVSTCDLKDIRSIGDRFSWVGERHSHT-VKCCL 575

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHRRFQFDKRWVEHEEIE 362
            DRAF ++E    FP A  + +    SDH  L +   E    ++ R F+FDKR +E    +
Sbjct: 576  DRAFINSEGAFLFPFAELEFLEFTGSDHKPLFLS-LEKTETRKMRPFRFDKRLLEVPHFK 634

Query: 363  GLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLDG 542
              +K  W+ + I      + ++V+ CR  + K      LNS   I  L  +L    +   
Sbjct: 635  TYVKAGWN-KAINGQRKHLPDQVRTCRQAMAKLKHKSNLNSRIRINQLQAALDKAMSSVN 693

Query: 543  DRDWDQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGISQL 722
              +    + ++ +L  AY  EE +WQQKSR  W+K GD+NT++FH+    R  +N +  +
Sbjct: 694  RTERRTISHIQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTI 753

Query: 723  VSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVCEA 902
              +EGM+   +K+I      F++K++ S  +P       G    ++ ++N  L + + + 
Sbjct: 754  KDEEGMIYRGDKEIGVHAQEFFTKVYESNGRPVSIIDFAGFKPIVTEQINDDLTKDLSDL 813

Query: 903  EIRQALFDLHPHKAPGPD 956
            EI  A+  +   KAPGPD
Sbjct: 814  EIYNAICHIGDDKAPGPD 831


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
            putative protein [Arabidopsis thaliana]
          Length = 1294

 Score =  168 bits (426), Expect = 2e-39
 Identities = 97/318 (30%), Positives = 159/318 (50%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFN+I SN EK GG  R  W+F  F N +    +++I  +G+ F+W   R     V+  L
Sbjct: 497  DFNEILSNNEKIGGPQRDEWTFRGFRNMVSTCDLKDIRSIGDRFSWVGERHSHT-VKCCL 555

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHRRFQFDKRWVEHEEIE 362
            DRAF ++E    FP A  + +    SDH  L +   E    ++ R F+FDKR +E    +
Sbjct: 556  DRAFINSEGAFLFPFAELEFLEFTGSDHKPLFLS-LEKTETRKMRPFRFDKRLLEVPHFK 614

Query: 363  GLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLDG 542
              +K  W+ + I      + ++V+ CR  + K      LNS   I  L  +L    +   
Sbjct: 615  TYVKAGWN-KAINGQRKHLPDQVRTCRQAMAKLKHKSNLNSRIRINQLQAALDKAMSSVN 673

Query: 543  DRDWDQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGISQL 722
              +    + ++ +L  AY  EE +WQQKSR  W+K GD+NT++FH+    R  +N +  +
Sbjct: 674  RTERRTISHIQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTI 733

Query: 723  VSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVCEA 902
              +EGM+   +K+I      F++K++ S  +P       G    ++ ++N  L + + + 
Sbjct: 734  KDEEGMIYRGDKEIGVHAQEFFTKVYESNGRPVSIIDFAGFKPIVTEQINDDLTKDLSDL 793

Query: 903  EIRQALFDLHPHKAPGPD 956
            EI  A+  +   KAPGPD
Sbjct: 794  EIYNAICHIGDDKAPGPD 811


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score =  168 bits (425), Expect = 3e-39
 Identities = 96/319 (30%), Positives = 164/319 (51%), Gaps = 1/319 (0%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFN+     E K  R R       F   + +  + +I   G  +T+ N +     V+ RL
Sbjct: 92   DFNEAMWQTEHKSHRKRSESQMRDFREVLSECDLHDIGFQGAPWTFCNMQREGRNVKVRL 151

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHRRFQFDKRWVEHEEIE 362
            DR   S  W   FP+A    +   SSDH  LL++  E    +  +  ++++ W     + 
Sbjct: 152  DRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLEREETTLARPMKIMRYEEVWERESSLP 211

Query: 363  GLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLDG 542
             +I+ AW++    + +  + +K+K    +L+ WS  K  N    I+ L   L  L+ + G
Sbjct: 212  EVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDLREKLGELRNI-G 270

Query: 543  DRDWD-QWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGISQ 719
              D D + +S+K +L +  ++EE++W+Q+SR+ WLK GD NT+YFH  A+ R   N I +
Sbjct: 271  LLDTDNEVHSVKKELEEMLHREEIWWKQRSRITWLKEGDLNTRYFHLKASWRAKKNKIKK 330

Query: 720  LVSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVCE 899
            L  ++G    ++K++++   +F+ +L+T +        LN   + IS ++N  LI+P  +
Sbjct: 331  LKKNDGSTTMNKKEMKEISRSFFQQLYTKDDNLNPVNLLNMFHEKISEQMNADLIKPFTD 390

Query: 900  AEIRQALFDLHPHKAPGPD 956
             EI  ALF + P KAPGPD
Sbjct: 391  EEISDALFQIGPLKAPGPD 409


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score =  168 bits (425), Expect = 3e-39
 Identities = 99/318 (31%), Positives = 165/318 (51%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFN+I +  EKKGGR R   S   F N I    M+++   G  ++W   R  E  +E  L
Sbjct: 498  DFNEILNLNEKKGGRRRSIGSLQNFTNMINCCNMKDLKSKGNPYSWVGKRQNET-IESCL 556

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHRRFQFDKRWVEHEEIE 362
            DR F +++W  SFP    + +  A SDH  ++ID  E++  KR + F++D+R  + E+  
Sbjct: 557  DRVFINSDWQASFPAFETEFLPIAGSDHAPVIIDIAEEVCTKRGQ-FRYDRRHFQFEDFV 615

Query: 363  GLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLDG 542
              ++  W+ R   ++      K+  CR EL KW    K N+A  IE L   + + +  D 
Sbjct: 616  DSVQRGWN-RGRSDSHGGYYEKLHCCRQELAKWKRRTKTNTAEKIETLKYRVDAAER-DH 673

Query: 543  DRDWDQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGISQL 722
                     L+ DLNQAY  EE++W  KSR  W+  GD+NT +F++    R+  N I  +
Sbjct: 674  TLPHQTILRLRQDLNQAYRDEELYWHLKSRNRWMLLGDRNTMFFYASTKLRKSRNRIKAI 733

Query: 723  VSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVCEA 902
               +G+    +  I K    +++ LFT+     ++  ++GI   ++ ++N +L++ V + 
Sbjct: 734  TDAQGIENFRDDTIGKVAENYFADLFTTTQTSDWEEIISGIAPKVTEQMNHELLQSVTDQ 793

Query: 903  EIRQALFDLHPHKAPGPD 956
            E+R A+F +   +APG D
Sbjct: 794  EVRDAVFAIGADRAPGFD 811


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  167 bits (424), Expect = 4e-39
 Identities = 97/320 (30%), Positives = 161/320 (50%), Gaps = 2/320 (0%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFN+I S  EK+GG  R       F   I D  ++++  VG  FTW    S    + ERL
Sbjct: 137  DFNEITSIEEKEGGAPRCERVMDAFREVIDDCAVKDLGYVGNRFTWQRGNSPSTLIRERL 196

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDD-FEDINKKRHRRFQFDKRWVEHEEI 359
            DR   + EWC +FP      + R  SDH  LL+     D  ++ ++ F+F+  W+  EE 
Sbjct: 197  DRMLANDEWCDNFPSWEVVHLPRYRSDHAPLLLKTGVNDSFRRGNKLFKFEAMWLSKEEC 256

Query: 360  EGLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLD 539
              +++ AW+    G+A   + N++      L  W+     N     +     L  L+  D
Sbjct: 257  GKIVEEAWN----GSAGEDITNRLDEVSRSLSTWATKTFGNLKKRKKEALTLLNGLQQRD 312

Query: 540  GDRDW-DQWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGIS 716
             D    +Q   +  DL++ +  EE +W  ++R N ++ GDKNTKYFH  A+QR+  N I+
Sbjct: 313  PDASTLEQCRIVSGDLDEIHRLEESYWHARARANEIRDGDKNTKYFHHKASQRKRRNTIN 372

Query: 717  QLVSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVC 896
            +L+ + G+     ++I   V  ++  LF +++    +  L G+   +S ++N  L+    
Sbjct: 373  ELLDENGVWKKGREEICGVVQHYFEGLFATDSPVNMELALEGLSHCVSTDMNTALLMLPS 432

Query: 897  EAEIRQALFDLHPHKAPGPD 956
              E+++ALF +HP+KAPG D
Sbjct: 433  GDEVKEALFAMHPNKAPGID 452


>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score =  167 bits (422), Expect = 7e-39
 Identities = 96/319 (30%), Positives = 163/319 (51%), Gaps = 1/319 (0%)
 Frame = +3

Query: 3    DFNDICSNLEKKGGRSRPAWSFTRFNNFIRDMRMQEIPLVGEEFTWANNRSGEGFVEERL 182
            DFN+     E K  R R       F   + +  + +I   G  +T+ N +     V+ RL
Sbjct: 117  DFNEAMWQTEHKSHRKRSESQMRDFREVLSECDLHDIGFQGAPWTFCNMQREGRNVKVRL 176

Query: 183  DRAFGSAEWCISFPKASAKAIFRASSDHCMLLIDDFEDINKKRHRRFQFDKRWVEHEEIE 362
            DR   S  W   FP+A    +   SSDH  LL++  E    +  +  ++++ W     + 
Sbjct: 177  DRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLEREETTLARPMKIMRYEEVWERESSLP 236

Query: 363  GLIKNAWSIRVIGNAMFQVQNKVKNCRIELLKWSCSKKLNSATHIEHLNNSLASLKTLDG 542
             +I+ AW++    + +  + +K+K    +L+ WS  K  N    I+ L   L  L+ + G
Sbjct: 237  EVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDLREKLGELRNI-G 295

Query: 543  DRDWD-QWNSLKNDLNQAYNKEEVFWQQKSRVNWLKAGDKNTKYFHSVATQRRMINGISQ 719
              D D + +S+K +L +  ++EE++W+Q+SR+ WLK GD NT+YFH  A+ R   N I +
Sbjct: 296  LLDTDNEVHSVKKELEEMLHREEIWWKQRSRITWLKEGDLNTRYFHLKASWRAKKNKIKK 355

Query: 720  LVSDEGMVCASEKDIEKEVTTFYSKLFTSETQPGFQGQLNGIPQSISPELNQKLIRPVCE 899
            L  ++G    ++K++++   +F+ +L+T +        LN   + IS ++N  LI+P   
Sbjct: 356  LKKNDGSTTMNKKEMKEINRSFFQQLYTKDDNLNPVNLLNMFHEKISEQMNADLIKPFTN 415

Query: 900  AEIRQALFDLHPHKAPGPD 956
             EI  ALF + P KAPGPD
Sbjct: 416  EEISDALFQIGPLKAPGPD 434