BLASTX nr result

ID: Rehmannia24_contig00002598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00002598
         (2004 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY25039.1| Uncharacterized protein isoform 1 [Theobroma cacao]     66   6e-08
ref|XP_006385799.1| hypothetical protein POPTR_0003s14060g [Popu...    62   7e-07
gb|EOY25041.1| Uncharacterized protein isoform 3 [Theobroma cacao]     62   7e-07
gb|EOY25040.1| Uncharacterized protein isoform 2, partial [Theob...    62   7e-07
ref|XP_002303651.1| hypothetical protein POPTR_0003s14060g [Popu...    62   7e-07
ref|XP_004244636.1| PREDICTED: uncharacterized protein LOC101260...    62   9e-07

>gb|EOY25039.1| Uncharacterized protein isoform 1 [Theobroma cacao]
          Length = 216

 Score = 65.9 bits (159), Expect = 6e-08
 Identities = 41/87 (47%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
 Frame = +2

Query: 1475 CRIGASTVQKNVVNGGGFTVKKSVQQA---------ANVGPRQKPQTLDSLFANMKEERM 1627
            CRIGA  VQ+  VNGG F  K   QQ           NV  +Q+PQTLDSLFANMKE+RM
Sbjct: 129  CRIGAPPVQRRAVNGG-FAAKPHQQQQQQQQQQEQQGNVATKQRPQTLDSLFANMKEQRM 187

Query: 1628 RVLVRSXXXXXXXXXXXXXXXVPWARG 1708
            RVL R                +PW RG
Sbjct: 188  RVLSRQ--HNTAQRNGGGRQRMPWGRG 212


>ref|XP_006385799.1| hypothetical protein POPTR_0003s14060g [Populus trichocarpa]
            gi|550343135|gb|ERP63596.1| hypothetical protein
            POPTR_0003s14060g [Populus trichocarpa]
          Length = 165

 Score = 62.4 bits (150), Expect = 7e-07
 Identities = 39/82 (47%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
 Frame = +2

Query: 1478 RIGASTVQKNVVNGGGFTVKK-----SVQQAANVGPRQKPQTLDSLFANMKEERMRVLVR 1642
            R G  TVQ+ V NGG F +K        QQ  + G +Q+PQTLDSLFANMKE+RM+VL R
Sbjct: 84   RAGGFTVQRRVANGG-FAMKSPPRLNQQQQQGDGGAKQRPQTLDSLFANMKEQRMKVLSR 142

Query: 1643 SXXXXXXXXXXXXXXXVPWARG 1708
                            VPWARG
Sbjct: 143  -RNKVVQHNGGGRQPRVPWARG 163


>gb|EOY25041.1| Uncharacterized protein isoform 3 [Theobroma cacao]
          Length = 205

 Score = 62.4 bits (150), Expect = 7e-07
 Identities = 40/86 (46%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
 Frame = +2

Query: 1478 RIGASTVQKNVVNGGGFTVKKSVQQA---------ANVGPRQKPQTLDSLFANMKEERMR 1630
            RIGA  VQ+  VNGG F  K   QQ           NV  +Q+PQTLDSLFANMKE+RMR
Sbjct: 119  RIGAPPVQRRAVNGG-FAAKPHQQQQQQQQQQEQQGNVATKQRPQTLDSLFANMKEQRMR 177

Query: 1631 VLVRSXXXXXXXXXXXXXXXVPWARG 1708
            VL R                +PW RG
Sbjct: 178  VLSRQ--HNTAQRNGGGRQRMPWGRG 201


>gb|EOY25040.1| Uncharacterized protein isoform 2, partial [Theobroma cacao]
          Length = 264

 Score = 62.4 bits (150), Expect = 7e-07
 Identities = 40/86 (46%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
 Frame = +2

Query: 1478 RIGASTVQKNVVNGGGFTVKKSVQQA---------ANVGPRQKPQTLDSLFANMKEERMR 1630
            RIGA  VQ+  VNGG F  K   QQ           NV  +Q+PQTLDSLFANMKE+RMR
Sbjct: 178  RIGAPPVQRRAVNGG-FAAKPHQQQQQQQQQQEQQGNVATKQRPQTLDSLFANMKEQRMR 236

Query: 1631 VLVRSXXXXXXXXXXXXXXXVPWARG 1708
            VL R                +PW RG
Sbjct: 237  VLSRQ--HNTAQRNGGGRQRMPWGRG 260


>ref|XP_002303651.1| hypothetical protein POPTR_0003s14060g [Populus trichocarpa]
            gi|222841083|gb|EEE78630.1| hypothetical protein
            POPTR_0003s14060g [Populus trichocarpa]
          Length = 200

 Score = 62.4 bits (150), Expect = 7e-07
 Identities = 39/82 (47%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
 Frame = +2

Query: 1478 RIGASTVQKNVVNGGGFTVKK-----SVQQAANVGPRQKPQTLDSLFANMKEERMRVLVR 1642
            R G  TVQ+ V NGG F +K        QQ  + G +Q+PQTLDSLFANMKE+RM+VL R
Sbjct: 119  RAGGFTVQRRVANGG-FAMKSPPRLNQQQQQGDGGAKQRPQTLDSLFANMKEQRMKVLSR 177

Query: 1643 SXXXXXXXXXXXXXXXVPWARG 1708
                            VPWARG
Sbjct: 178  -RNKVVQHNGGGRQPRVPWARG 198


>ref|XP_004244636.1| PREDICTED: uncharacterized protein LOC101260556 [Solanum
            lycopersicum]
          Length = 196

 Score = 62.0 bits (149), Expect = 9e-07
 Identities = 35/77 (45%), Positives = 44/77 (57%)
 Frame = +2

Query: 1478 RIGASTVQKNVVNGGGFTVKKSVQQAANVGPRQKPQTLDSLFANMKEERMRVLVRSXXXX 1657
            R GA  VQK+  NGG F  K+  Q+   V  +Q+PQTLDSLFANMKE+RM+  ++S    
Sbjct: 119  RFGAPPVQKSAANGGRFIAKQQKQEVKPVS-KQRPQTLDSLFANMKEQRMK--MQSQQNN 175

Query: 1658 XXXXXXXXXXXVPWARG 1708
                        PWARG
Sbjct: 176  MPRRNGGGQHVAPWARG 192


Top