BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00001812
         (2406 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chlorop...   759   0.0  
ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chlorop...   749   0.0  
gb|EMJ04984.1| hypothetical protein PRUPE_ppa001872mg [Prunus pe...   679   0.0  
ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop...   665   0.0  
emb|CBI28022.3| unnamed protein product [Vitis vinifera]              664   0.0  
gb|EOY30694.1| RNA-binding CRS1 / YhbY domain-containing protein...   659   0.0  
ref|XP_002332503.1| predicted protein [Populus trichocarpa]           645   0.0  
ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Popu...   643   0.0  
ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chlorop...   641   0.0  
gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]             640   0.0  
ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm...   634   e-179
ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chlorop...   621   e-175
ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]...   617   e-174
ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arab...   614   e-173
ref|XP_006408916.1| hypothetical protein EUTSA_v10001924mg [Eutr...   609   e-171
ref|XP_006297110.1| hypothetical protein CARUB_v10013113mg [Caps...   599   e-168
ref|XP_004503464.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   594   e-167
ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]...   591   e-166
ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chlorop...   575   e-161
ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, par...   575   e-161

>ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
            tuberosum]
          Length = 764

 Score =  759 bits (1961), Expect = 0.0
 Identities = 413/756 (54%), Positives = 498/756 (65%), Gaps = 46/756 (6%)
 Frame = +3

Query: 138  THRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPTT 317
            +HR  TEIRFSRWNNANA+KFIRH+R QKE+ED+IR  KRFDS L IA+NYNPAPP P T
Sbjct: 20   SHRPATEIRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRFDSVLNIANNYNPAPPSPVT 79

Query: 318  FXXXXXXXXXXXXXXXXXXXXXXXTPSRKT------------LHPAFKPLPRPRKIP-VN 458
                                     P +K+            +HPAFKPL R RKIP   
Sbjct: 80   -------EKTFKSVGTPSTPSSPSIPGKKSKYSRNFQNNPRQIHPAFKPLVRTRKIPDET 132

Query: 459  ENETEKSSGLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAK 638
             +ET + S ++ ++DENGV YE PEAPFVYQYSYTETPK+KP KLREPLVSPFGP +M +
Sbjct: 133  ADETARKSAIDIKVDENGVCYEFPEAPFVYQYSYTETPKLKPKKLREPLVSPFGPESMQR 192

Query: 639  PWLGRXXXXXXXXXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPL 818
            PW GR           EFDSFQLPPPHKKGVKPVQAPGPFL GSGPKYV+SREEVLG PL
Sbjct: 193  PWTGRKPLPPSKKKRPEFDSFQLPPPHKKGVKPVQAPGPFLAGSGPKYVKSREEVLGEPL 252

Query: 819  TKEEIEELIKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVC 998
            TKEE+ ELI   KK+ RQ+N+GRDGLTHNML+NIHA WKR+RVCKIKCKGVCTVDMDNVC
Sbjct: 253  TKEEMMELINSCKKTTRQMNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMDNVC 312

Query: 999  QQLEEKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTL 1178
            ++LEEKTGGKIIY++GG+IYLFRGRNYNYK+RPRFPLMLW+PVTPVYPRL+QRVPEGLTL
Sbjct: 313  EKLEEKTGGKIIYHKGGLIYLFRGRNYNYKTRPRFPLMLWRPVTPVYPRLVQRVPEGLTL 372

Query: 1179 EEANDMRKRGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAK 1358
            EEA  MRK+G  L PICKLAKNGVYCDLVKNVREAFEACELV INCQGLNPSDY+KIGAK
Sbjct: 373  EEATLMRKKGRNLIPICKLAKNGVYCDLVKNVREAFEACELVSINCQGLNPSDYRKIGAK 432

Query: 1359 LKDLVPCVLLSFECEHILVWRGRDWQSLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXX 1538
            LKDLVPCVL+SFE EHIL+WRGRDW S L  D      +    +                
Sbjct: 433  LKDLVPCVLISFEQEHILMWRGRDWVSSLPEDRDNDSDKAANTNRSLEVQVVASTSGSPR 492

Query: 1539 XCIMEDKPNDLEISLSPTYSNEESQGNSELT-EVEAED--IAKVPDAPVIASHAVLNGDG 1709
              I E    +L  +  P    E      + T E  +ED  +     AP+        G  
Sbjct: 493  LPITEMNTCNLSANTFPLGEEESEYVRRDGTKEDRSEDHYLESSNKAPLDVCSVTTTG-- 550

Query: 1710 IIDESEKSPVFPGSFYGDPSEAFN-----QTVGNDATLENTERAATVLNYTKNADEEMNL 1874
             I ESE   V+ G   GD S   +     +T  +D+ ++      +  +  +N  +  +L
Sbjct: 551  -ISESEIPLVYAGD-TGDNSRILSDCRECKTRLDDSVVDTENELESASDDVENKFDSSSL 608

Query: 1875 -----------------------SSVPCTEGILLLREQAVENGMALVLDDHNLDADTVFK 1985
                                   S  PCTEGILLL +QA+E+G A++LDD ++DAD V++
Sbjct: 609  VPLTGYKVHSLTVDTNQNCQLVSSITPCTEGILLLWKQAIESGSAVLLDDSSIDADIVYQ 668

Query: 1986 KSVDFAKTAPTGPVFSLQRKQLAVQKNKEQERDD-NSGSKEKEAGAALGTEVTVPGRR-N 2159
            ++V  + +AP GPVF  Q K+++VQ+  E+E  D   G  + +  A+   E  V GR+ N
Sbjct: 669  RAVALSTSAPAGPVFQHQPKKVSVQRRGEEEIGDLEVGCTKLDTPASSRKETAVSGRKVN 728

Query: 2160 ERKTSRNEKLKDIKADYLNVVPQGNLRIDELAKLLA 2267
               ++R EKLK I+ DYLNVVP+G+L +DELAKLLA
Sbjct: 729  STTSTRKEKLKGIREDYLNVVPKGSLGVDELAKLLA 764


>ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
            lycopersicum]
          Length = 766

 Score =  749 bits (1935), Expect = 0.0
 Identities = 405/748 (54%), Positives = 495/748 (66%), Gaps = 38/748 (5%)
 Frame = +3

Query: 138  THRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPT- 314
            +HR  TEIRFSRWNNANA+KFIRH+R QKE+ED+IR  KRFDS L+IA+NYNPAPP P  
Sbjct: 20   SHRPATEIRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRFDSVLSIANNYNPAPPSPVA 79

Query: 315  --TFXXXXXXXXXXXXXXXXXXXXXXXT--PSRKTLHPAFKPLPRPRKIPVNE-NETEKS 479
              TF                           + + +HPAFKPL R RKIPV   +ET   
Sbjct: 80   EKTFKSTGTPSTPSSPSIPGKKSKYSRNFHNNPRQIHPAFKPLVRTRKIPVETPDETAGK 139

Query: 480  SGLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXX 659
            S ++ ++DENGV YE PEAPFVYQYSYTETPKVKP KLREPLVSPFGP +M +PW GR  
Sbjct: 140  SDIDIKVDENGVCYEFPEAPFVYQYSYTETPKVKPRKLREPLVSPFGPESMQRPWTGRKP 199

Query: 660  XXXXXXXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEE 839
                     EFDSFQLPPPHKKGVKPVQAPGPFL GSGPKYV+SREEVLG PLTKEE+ E
Sbjct: 200  LPPSKKKLPEFDSFQLPPPHKKGVKPVQAPGPFLAGSGPKYVKSREEVLGEPLTKEEMME 259

Query: 840  LIKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKT 1019
            LI   KK+ RQ+N+GRDGLTHNML+NIHA WKR+RVCKIKCKGVCTVDMDNVC++LEEKT
Sbjct: 260  LINSCKKTTRQMNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMDNVCEKLEEKT 319

Query: 1020 GGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMR 1199
            GGKIIY++GGVIYLFRGRNYNY +RPRFPLMLW+PVTPVYPRL++RVPEGLTLEEA +MR
Sbjct: 320  GGKIIYHKGGVIYLFRGRNYNYMTRPRFPLMLWRPVTPVYPRLVRRVPEGLTLEEATEMR 379

Query: 1200 KRGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPC 1379
            K+G  L PICKLAKNGVYCDLVKNVREAFEACELV INCQGLNPSDY+KIGAKLKDLVPC
Sbjct: 380  KKGRNLIPICKLAKNGVYCDLVKNVREAFEACELVCINCQGLNPSDYRKIGAKLKDLVPC 439

Query: 1380 VLLSFECEHILVWRGRDWQSLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXXC----- 1544
            VL+SFE EHIL+WRGRDW S L  D     ++E  +   A                    
Sbjct: 440  VLISFEQEHILIWRGRDWVSSLPEDGDNPEIREGSESVNAANTNRSFEVQVVASTAGSSS 499

Query: 1545 --IMEDKPNDLEISLSP----------------TYSNEESQGNSELTEVEAEDIAKVPDA 1670
              + E    +L  +  P                  S +    +S    V    I+K  + 
Sbjct: 500  LPVTEVNTYNLSANTFPLGDEDAEYVRKDGTKEDRSEDHYPESSNKVSVTTTGISK-SEI 558

Query: 1671 PVIASHAVLNGDGIIDE-------SEKSPVFPGSFYGDPSEAFNQTVGNDATLENTERAA 1829
            P++ +    +   I+ +       S+ S V   S +   S+       + + +  T    
Sbjct: 559  PLVYAGDTGDNSRILSDCRECKTRSDDSVVDKESEFESASDDVENKFDSSSLVPLTGYKV 618

Query: 1830 TVLNYTKNADEEMNLSSVPCTEGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKT 2009
              L    N + ++  S  PCTEGILLL +QA+E+G A+VL+D ++DAD V++++V  + +
Sbjct: 619  HSLTVDTNQNCQLVSSITPCTEGILLLWKQAIESGSAVVLNDSSIDADIVYQRAVALSTS 678

Query: 2010 APTGPVFSLQRKQLAVQKNKEQERDD-NSGSKEKEAGAALGTEVTVPGRR-NERKTSRNE 2183
             P GPVF  Q K+++VQ+  E+E  D   G  + +  A+   E  V  R+ N   ++R E
Sbjct: 679  VPPGPVFQHQPKKVSVQRRGEEEIGDLEVGCTKLDTPASSRKETVVSSRKVNSTTSTRKE 738

Query: 2184 KLKDIKADYLNVVPQGNLRIDELAKLLA 2267
            K K I+ DYLNVVP+G+L +DELAKLLA
Sbjct: 739  KKKGIRKDYLNVVPKGSLGVDELAKLLA 766


>gb|EMJ04984.1| hypothetical protein PRUPE_ppa001872mg [Prunus persica]
          Length = 750

 Score =  679 bits (1752), Expect = 0.0
 Identities = 373/739 (50%), Positives = 471/739 (63%), Gaps = 30/739 (4%)
 Frame = +3

Query: 141  HRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPTT- 317
            +R PTE+RF+RWNNANA+KF    R Q+E+ED IR E+RFDSA  IA  Y+ A    TT 
Sbjct: 27   NRPPTEVRFARWNNANAEKFNERRRAQQEIEDDIRRERRFDSATRIATIYDSATDTTTTS 86

Query: 318  --FXXXXXXXXXXXXXXXXXXXXXXXTPSRKTLHPAFKPLPRPRK---IPVNENETEKSS 482
              F                        P+ K  HPAF+ + RP K   IP ++  T    
Sbjct: 87   ETFKSVGTPSFPSSPSIPGKKSKYSKNPNPKESHPAFRRIIRPTKLSKIPKDKGPTVDRK 146

Query: 483  GLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXX 662
              N  + ++G+SY I  APF ++YSYTETPKVKP+KLREP  +PFGP TMA+PW GR   
Sbjct: 147  A-NISVGDDGLSYVIDGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMARPWTGRAPL 205

Query: 663  XXXXXXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEEL 842
                    EFDSFQLPPPHKKGVKPVQ+PGP+LPGSGPKYV+SR+E+LG PLT EE++EL
Sbjct: 206  PPSKKKLKEFDSFQLPPPHKKGVKPVQSPGPYLPGSGPKYVKSRDEILGDPLTPEEVKEL 265

Query: 843  IKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTG 1022
            +KG  K+ RQLNMGRDG THNMLDNIHA WKRRRVCKIKCKGVCTVDMDNVC+Q+EEKTG
Sbjct: 266  VKGCIKTRRQLNMGRDGFTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCEQIEEKTG 325

Query: 1023 GKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRK 1202
            GKIIY +GGVIYLFRGRNYNYK+RP+FPLMLW+P+TPVYPRL+QR PEGLTLEEA +MRK
Sbjct: 326  GKIIYRKGGVIYLFRGRNYNYKTRPQFPLMLWRPITPVYPRLVQRAPEGLTLEEATEMRK 385

Query: 1203 RGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCV 1382
            +G  L PICKL KNGVY +L KN REAFE CELVRINC G+N SDY+KIGAKLKDLVPCV
Sbjct: 386  KGRNLIPICKLGKNGVYSELAKNAREAFEECELVRINCTGMNGSDYRKIGAKLKDLVPCV 445

Query: 1383 LLSFECEHILVWRGRDWQSLLE-PDESLKGLQEVKDDDVAXXXXXXXXXXXXXXCIMEDK 1559
            L+SFE EHIL+WRGR+W+S +  P+  LK ++    DD                C     
Sbjct: 446  LISFELEHILMWRGREWKSSIPYPENDLKEVKGSDVDDSTSIAPPLEGQEESTSCASTVS 505

Query: 1560 PNDLEISLSPTYSNEESQGNSELTEVEAEDIAKVPDAPVIASHAVLNGDGIIDESEKSPV 1739
              D  + +  T  +  S G+     V AE+   +  +  +   A ++G   +  +  +  
Sbjct: 506  VKDASLEILNT--STPSIGSE---VVGAEESGDLSPSQYVEPCATVDGVSAVGGTHVTET 560

Query: 1740 FPGSFYGDPSEAFNQTVGNDATLENT-----ERAATVLNYTKNADEEMNLSSV------- 1883
                   D S+A     G D  L+NT     E + T +     ++E    +SV       
Sbjct: 561  I-SDVEDDESKAILDPSGIDRILDNTGCAADEASPTTVTGGPRSNENPQCASVSSENLSE 619

Query: 1884 ------PCTEGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQR- 2042
                  PC E +LLL  +AV +G AL+LDD  LDAD +F+++V  A++AP GPVF   R 
Sbjct: 620  PARSSGPCMENVLLLLNEAVGSGSALILDDSALDADIIFQRAVALAQSAPPGPVFKHHRP 679

Query: 2043 KQLAVQKNKEQERDDNSGSKEKEAGAALGTEVTVPGRRN----ERKTSRNEKLKDIKADY 2210
            K++AVQK  +  + + S S+ K        E+TVP +R     + K ++ ++ +D     
Sbjct: 680  KKVAVQKRIKIMKQEASVSEVK--------EITVPVKRGSEKIQMKDTKVKRTRDFGESL 731

Query: 2211 LNVVPQGNLRIDELAKLLA 2267
             NVVPQG+LR+DELAKLLA
Sbjct: 732  DNVVPQGSLRVDELAKLLA 750


>ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
          Length = 752

 Score =  665 bits (1717), Expect = 0.0
 Identities = 379/748 (50%), Positives = 463/748 (61%), Gaps = 38/748 (5%)
 Frame = +3

Query: 138  THRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAH--NYNPAPPHP 311
            +HR  +E+RFSRWNNANA++F   +R QKE+ED IR E+RFDSA  IA   +   +    
Sbjct: 18   SHRPASEVRFSRWNNANAERFTLRERAQKEIEDNIRRERRFDSATRIADIDDAGTSKEAA 77

Query: 312  TTFXXXXXXXXXXXXXXXXXXXXXXXTPSRKTLHPAFKPLPRPRKIPVNENETEKSSGLN 491
                                      + + KT HPAF+ + R  K+P      E   G++
Sbjct: 78   AAGTFKSTGTPSSPSKPSIPGKSSKYSKNSKTSHPAFRQISRRTKLPGPNISPEAKRGIS 137

Query: 492  FRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXX 671
              I E+GVSY +P  PF  +YSYTETPKVKP+ LREP   PFGP TM +PW GR      
Sbjct: 138  --IGEDGVSYMVPGVPFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPLPPS 195

Query: 672  XXXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKG 851
                 EFDSFQLPPP KK VKPVQAPGPFLPGSGP+YVRSREE+LG PLT+EEI+EL++G
Sbjct: 196  KKKLKEFDSFQLPPPGKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKELVQG 255

Query: 852  SKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKI 1031
              KS RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNV QQLEEKTGGK+
Sbjct: 256  CVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKV 315

Query: 1032 IYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGS 1211
            IY +GGV++LFRGRNYNY++RPRFPLMLWKPVTPVYPRL+QR PEGLTLEEA  MRK+G 
Sbjct: 316  IYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRKKGR 375

Query: 1212 YLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLS 1391
             L PICKLAKNGVY DLV NVREAFE CELVRINCQGLN SDY+KIGAKLKDLVPCVL+S
Sbjct: 376  KLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVLIS 435

Query: 1392 FECEHILVWRGRDWQSLL-EPDESLKGLQEVKDDDVAXXXXXXXXXXXXXXCIMEDKPND 1568
            FE EHIL+WRG DW+ L  +P++  K  +E  ++  A              C  +    D
Sbjct: 436  FEHEHILMWRGSDWKFLHPKPEDGCKEAKESDNNSEASIPPPFEGQELSASCSSKISVKD 495

Query: 1569 LEISL-----SPTYSNEESQGNSELTEVEAEDIAKVP--DAPVIASHAV---LNGDGIID 1718
              + +     SP  + + +   +E    +  DI      D P  A+  V    N D + D
Sbjct: 496  TSLDMLDTIASPVINEDVAMDKTEDLSSKGNDILSFEGNDKPFAATQLVKTAYNWDTVSD 555

Query: 1719 ------ESEKSPVFPGSFYGDPSEAFNQTVGNDATLENTERAATVLN-YTKNADE----- 1862
                  ESE       + +    E+    V  D  LEN      +++  T + D+     
Sbjct: 556  DTGGTNESEIILTKLDNAHHADDESAAMPVELDTMLENGSIKNELMDAVTHDMDKLQDIP 615

Query: 1863 -------EMNLSSVPCTEGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTG 2021
                   +M  SS PCT G+LLL +QAV++G A+VLD  + DAD V+ K+V F+K AP G
Sbjct: 616  KASQDCGKMTGSSAPCTGGLLLLLKQAVDSGSAVVLDGDSCDADIVYGKTVAFSKDAPPG 675

Query: 2022 PVFSLQRKQLAVQKNKEQERDDNSGSKEKEAGAALGTEVTVPGR-RNERKTSRNEKLKDI 2198
            PVF   RK    +  KE+ RD             +G  VT P + R++ K+SRN+  KD 
Sbjct: 676  PVFRRPRKAAVQKCEKEEPRD-----------LVVGKIVTAPEKGRSQSKSSRNQIAKDF 724

Query: 2199 K-----ADYLNVVPQGNLRIDELAKLLA 2267
            K      DY  V  +G L +DELAKLLA
Sbjct: 725  KEGYLDVDYPGVGTRGTLGVDELAKLLA 752


>emb|CBI28022.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  664 bits (1714), Expect = 0.0
 Identities = 371/729 (50%), Positives = 454/729 (62%), Gaps = 19/729 (2%)
 Frame = +3

Query: 138  THRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAH--NYNPAPPHP 311
            +HR  +E+RFSRWNNANA++F   +R QKE+ED IR E+RFDSA  IA   +   +    
Sbjct: 18   SHRPASEVRFSRWNNANAERFTLRERAQKEIEDNIRRERRFDSATRIADIDDAGTSKEAA 77

Query: 312  TTFXXXXXXXXXXXXXXXXXXXXXXXTPSRKTLHPAFKPLPRPRKIPVNENETEKSSGLN 491
                                      + + KT HPAF+ + R  K+P      E   G++
Sbjct: 78   AAGTFKSTGTPSSPSKPSIPGKSSKYSKNSKTSHPAFRQISRRTKLPGPNISPEAKRGIS 137

Query: 492  FRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXX 671
              I E+GVSY +P  PF  +YSYTETPKVKP+ LREP   PFGP TM +PW GR      
Sbjct: 138  --IGEDGVSYMVPGVPFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPLPPS 195

Query: 672  XXXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKG 851
                 EFDSFQLPPP KK VKPVQAPGPFLPGSGP+YVRSREE+LG PLT+EEI+EL++G
Sbjct: 196  KKKLKEFDSFQLPPPGKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKELVQG 255

Query: 852  SKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKI 1031
              KS RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNV QQLEEKTGGK+
Sbjct: 256  CVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKV 315

Query: 1032 IYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGS 1211
            IY +GGV++LFRGRNYNY++RPRFPLMLWKPVTPVYPRL+QR PEGLTLEEA  MRK+G 
Sbjct: 316  IYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRKKGR 375

Query: 1212 YLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLS 1391
             L PICKLAKNGVY DLV NVREAFE CELVRINCQGLN SDY+KIGAKLKDLVPCVL+S
Sbjct: 376  KLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVLIS 435

Query: 1392 FECEHILVWRGRDWQSL-LEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXXCIMEDKPND 1568
            FE EHIL+WRG DW+ L  +P++  K  +E  ++  A              C  +    D
Sbjct: 436  FEHEHILMWRGSDWKFLHPKPEDGCKEAKESDNNSEASIPPPFEGQELSASCSSKISVKD 495

Query: 1569 LEISL-----SPTYSNEESQGNSELTEVEAEDIAKVP--DAPVIASHAV---LNGDGIID 1718
              + +     SP  + + +   +E    +  DI      D P  A+  V    N D + D
Sbjct: 496  TSLDMLDTIASPVINEDVAMDKTEDLSSKGNDILSFEGNDKPFAATQLVKTAYNWDTVSD 555

Query: 1719 ESEKSPVFPGSFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNLSSVPCTEG 1898
            ++           G        T  ++A   + E AA  +      +     +  PCT G
Sbjct: 556  DTG----------GTNESEIILTKLDNAHHADDESAAMPVELDTMLENGSIKNDAPCTGG 605

Query: 1899 ILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQRKQLAVQKNKEQE 2078
            +LLL +QAV++G A+VLD  + DAD V+ K+V F+K AP GPVF   RK    +  KE+ 
Sbjct: 606  LLLLLKQAVDSGSAVVLDGDSCDADIVYGKTVAFSKDAPPGPVFRRPRKAAVQKCEKEEP 665

Query: 2079 RDDNSGSKEKEAGAALGTEVTVPGR-RNERKTSRNEKLKDIK-----ADYLNVVPQGNLR 2240
            RD             +G  VT P + R++ K+SRN+  KD K      DY  V  +G L 
Sbjct: 666  RD-----------LVVGKIVTAPEKGRSQSKSSRNQIAKDFKEGYLDVDYPGVGTRGTLG 714

Query: 2241 IDELAKLLA 2267
            +DELAKLLA
Sbjct: 715  VDELAKLLA 723


>gb|EOY30694.1| RNA-binding CRS1 / YhbY domain-containing protein, putative
            [Theobroma cacao]
          Length = 767

 Score =  659 bits (1701), Expect = 0.0
 Identities = 371/757 (49%), Positives = 470/757 (62%), Gaps = 48/757 (6%)
 Frame = +3

Query: 141  HRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNP--APPHPT 314
            HR PTEIRFSRWNNANA+KF +  R Q+E+ED IR  +RFDSA  IA   +P  A P PT
Sbjct: 28   HRPPTEIRFSRWNNANAEKFNQRQRAQQEIEDDIRRYRRFDSATKIAITIDPSSASPRPT 87

Query: 315  TFXXXXXXXXXXXXXXXXXXXXXXXTPSRKTLHPAFKPLPRPRKIPVNENETEKSSGLNF 494
                                      P     HPAF+   +    P      +K +  N 
Sbjct: 88   ETYKSLGSPSSPSNPSIPGKKSKYSKPPN---HPAFRKFSKTANPPPPTPLDKKPA--NV 142

Query: 495  RIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXXX 674
             I ++G+S+ I  APF ++YSYTETPKVKP+KLREP  SPFGP TM +PW GR       
Sbjct: 143  SIGDDGISFVIDGAPFEFKYSYTETPKVKPIKLREPPYSPFGPSTMPRPWTGRAPLPPSK 202

Query: 675  XXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKGS 854
                EFDSF LPPP+KKGVKP+Q PGP+LPG+GP+YV+SREE+LG PL  EE++EL+ G 
Sbjct: 203  KKMKEFDSFVLPPPNKKGVKPIQKPGPYLPGTGPRYVQSREEILGEPLNAEEVKELVNGC 262

Query: 855  KKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKII 1034
             KS RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNVC+QLEE+TGGK+I
Sbjct: 263  LKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCEQLEERTGGKVI 322

Query: 1035 YNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGSY 1214
            Y RGGV++LFRGRNYNYK+RPRFPLMLWKPVTP+YPRLIQ+ PEGLT+EE ++MRK+G  
Sbjct: 323  YRRGGVLFLFRGRNYNYKTRPRFPLMLWKPVTPMYPRLIQKAPEGLTVEEMSEMRKKGRK 382

Query: 1215 LTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLSF 1394
            L PICKLAKNGVY DLVKNVREAFE CELVR+NC+G+  SDY+KIGAKLK+LVPCVL+SF
Sbjct: 383  LMPICKLAKNGVYSDLVKNVREAFEECELVRVNCEGIKGSDYRKIGAKLKELVPCVLISF 442

Query: 1395 ECEHILVWRGRDWQSLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXXCIMEDKPNDLE 1574
            E E IL+WRGR+W+S         G++E   ++                C+      D  
Sbjct: 443  ENESILMWRGRNWKSSFLKPAFNSGVEERDAENATSILGQLEGQELSPVCVQAGY-TDQP 501

Query: 1575 ISLSPTYSNEESQGNSELTEVEAEDIAKVPDAPVIASHAVLNGDGIIDESEKSPVFPG-- 1748
            + +S   S E+ + + E     A   AK      I S  +   D   DESE      G  
Sbjct: 502  LMISQEISIEQRESSVEKDRPNAVLDAKPAKMETIES-TLDRIDYANDESESKRNTSGGA 560

Query: 1749 SFYGD------PSEAFNQTVGNDATL-----ENTERAA--------------TVLNYTKN 1853
            +F+GD       SE  ++T   +  L     EN E  A              T+     +
Sbjct: 561  TFFGDIKCASSESETMSKTYSPEPILDNPGIENEEPVALPLESDVMPRSSENTLSQSESS 620

Query: 1854 ADEEMNL------------------SSVPCTEGILLLREQAVENGMALVLDDHNLDADTV 1979
              + +NL                   + PCTE +LL  +QAVE+G A+VLDD  LDAD +
Sbjct: 621  VMDSLNLDQLEDVAQASQDINGPARKTAPCTERVLLFMKQAVESGSAVVLDDATLDADII 680

Query: 1980 FKKSVDFAKTAPTGPVFSLQRKQLAVQKNKEQERDDNSGSKEKEAGAALGTEVTVPGR-R 2156
            ++++V FA++AP GPVF  Q +++AVQKN +QE   N   KE +A         VP +  
Sbjct: 681  YERAVAFARSAPPGPVFRHQPRKVAVQKNGKQE-PANLEVKELKA---------VPNKGG 730

Query: 2157 NERKTSRNEKLKDIKADYLNVVPQGNLRIDELAKLLA 2267
            NE++ S+ +++K I   +L++VP+G+L +DELAKLLA
Sbjct: 731  NEKQASKTQRIKYIDERHLDIVPRGSLGVDELAKLLA 767


>ref|XP_002332503.1| predicted protein [Populus trichocarpa]
          Length = 699

 Score =  645 bits (1663), Expect = 0.0
 Identities = 366/715 (51%), Positives = 463/715 (64%), Gaps = 5/715 (0%)
 Frame = +3

Query: 138  THRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNP--APPHP 311
            +HR  TE+ FSRW NANA KF +  R+Q+E+E+ I   +RF SA  I  NY+P  A    
Sbjct: 21   SHRPSTEVHFSRWFNANADKFNQRYRSQQEIEEDISRRRRFTSANNIVTNYDPKNAAEVD 80

Query: 312  TTFXXXXXXXXXXXXXXXXXXXXXXXTPSRKTLHPAFKPLPRPRKIPVNENETEK--SSG 485
             +F                        P +KT HPAF  LP+  ++P+  N  +      
Sbjct: 81   ISFFKSTGTPSSPSSPSIPGKKSKYSKPLKKT-HPAF--LPKITRVPLPRNNAKPPIDRK 137

Query: 486  LNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXX 665
             + ++ E+GVSY I  APF ++YSYTETPKVKP+KLRE   +PFGP TM +PW GR    
Sbjct: 138  ADIKLSEDGVSYVIDGAPFEFKYSYTETPKVKPLKLREAPYAPFGPITMPRPWTGRAPLP 197

Query: 666  XXXXXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELI 845
                   EFDSF LPPP KKGVKPVQAPGPFLPG+GP+Y ++REE+LG PLT+EEI+EL+
Sbjct: 198  PSKKKLREFDSFVLPPPDKKGVKPVQAPGPFLPGAGPRYAKTREEILGDPLTQEEIQELV 257

Query: 846  KGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGG 1025
             G  K+ RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNVCQQLEE+TGG
Sbjct: 258  DGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEERTGG 317

Query: 1026 KIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKR 1205
            KIIY +GGV+YLFRGRNYNY+ RPRFPLMLWKPVTPVYPRLIQR PEGLTL+EA+ MR +
Sbjct: 318  KIIYRKGGVLYLFRGRNYNYRFRPRFPLMLWKPVTPVYPRLIQRAPEGLTLQEASGMRNK 377

Query: 1206 GSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVL 1385
            G  L PICKL KNGVY DLV+NVREAFE CELVRINCQG+N SD++KIGAKL+DLVPCVL
Sbjct: 378  GRKLIPICKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGAKLRDLVPCVL 437

Query: 1386 LSFECEHILVWRGRDWQSLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXXCIMEDKPN 1565
            +SFECEHIL+WRGRDW+S           + V D D A               ++E   N
Sbjct: 438  ISFECEHILMWRGRDWKSSF--------TKPVNDGDEAKNSSIDGATSATP--LLEGLQN 487

Query: 1566 D-LEISLSPTYSNEESQGNSELTEVEAEDIAKVPDAPVIASHAVLNGDGIIDESEKSPVF 1742
            +   +  + T + + S+ ++   E + ED+++       A+   ++    I ES+ +P  
Sbjct: 488  ETFSVKDASTLNLKTSRMDA---EDQGEDLSQKDIDETFAAKIFISTSTEIYESKTTPDN 544

Query: 1743 PGSFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNLSSVPCTEGILLLREQA 1922
              S     SEA     G++  L+N    + V    K     +N S    T+G+L L +QA
Sbjct: 545  DDSSAVTKSEAMRIASGSE--LQNVSEGSHVSELAK-----LNES---YTQGVLELLKQA 594

Query: 1923 VENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQRKQLAVQKNKEQERDDNSGSK 2102
            VE G A+VL D NLDAD V++K+V FA++AP GPVF  Q +   VQK++ QE   N   +
Sbjct: 595  VEIGSAVVL-DANLDADAVYQKAVAFAQSAPPGPVFRRQPRNTVVQKSEMQE---NGELE 650

Query: 2103 EKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKADYLNVVPQGNLRIDELAKLLA 2267
             K+      T  +  G  +ERK+S+  + K     Y++ VPQG+LR+DELAKLLA
Sbjct: 651  VKQV-----TSFSKMGGGSERKSSKVRR-KYFNEQYVDSVPQGSLRVDELAKLLA 699


>ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Populus trichocarpa]
            gi|550312256|gb|ERP48370.1| hypothetical protein
            POPTR_0024s00430g [Populus trichocarpa]
          Length = 731

 Score =  643 bits (1658), Expect = 0.0
 Identities = 362/725 (49%), Positives = 455/725 (62%), Gaps = 15/725 (2%)
 Frame = +3

Query: 138  THRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNP--APPHP 311
            +HR  TE+ FSRW NANA KF +  R+Q+E+E+ I   +RF SA  I  NY+P  A    
Sbjct: 21   SHRPSTEVHFSRWFNANADKFNQRYRSQQEIEEDISRRRRFTSANNIVTNYDPKNAAEVD 80

Query: 312  TTFXXXXXXXXXXXXXXXXXXXXXXXTPSRKTLHPAFKPLPRPRKIPVNENETEK--SSG 485
             +F                        P +KT HPAF  LP+  ++P+  N  +      
Sbjct: 81   ISFFKSTGTPSSPSSPSIPGKKSKYSKPLKKT-HPAF--LPKITRVPLPRNNAKPPIDRK 137

Query: 486  LNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXX 665
             + ++ E+GVSY I  APF ++YSYTETPKVKP+KLRE   +PFGP TM +PW GR    
Sbjct: 138  ADIKLSEDGVSYVIDGAPFEFKYSYTETPKVKPLKLREAPYAPFGPITMPRPWTGRAPLP 197

Query: 666  XXXXXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELI 845
                   EFDSF LPPP KKGVKPVQAPGPFLPG+GP+Y ++REE+LG PLT+EEI+EL+
Sbjct: 198  PSKKKLREFDSFVLPPPDKKGVKPVQAPGPFLPGAGPRYAKTREEILGDPLTQEEIQELV 257

Query: 846  KGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGG 1025
             G  K+ RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNVCQQLEE+TGG
Sbjct: 258  DGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEERTGG 317

Query: 1026 KIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKR 1205
            KIIY +GGV+YLFRGRNYNY+ RPRFPLMLWKPVTPVYPRLIQR PEGLTL+EA+ MR +
Sbjct: 318  KIIYRKGGVLYLFRGRNYNYRFRPRFPLMLWKPVTPVYPRLIQRAPEGLTLQEASGMRNK 377

Query: 1206 GSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVL 1385
            G  L PICKL KNGVY DLV+NVREAFE CELVRINCQG+N SD++KIGAKL+DLVPCVL
Sbjct: 378  GRKLIPICKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGAKLRDLVPCVL 437

Query: 1386 LSFECEHILVWRGRDWQ-SLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXXCIMEDKP 1562
            +SFECEHIL+WRGRDW+ S  +P       +    D                  + +   
Sbjct: 438  ISFECEHILMWRGRDWKSSFTKPVNDGDEAKNSSIDGATSATPLLEGLQNETFSVKDAST 497

Query: 1563 NDLEISLSPTYSNEESQGNSELTEVEAEDIAKVPDAPVIASHAVLNGD--GIIDESEKSP 1736
             +L+ S        E     ++ E  A  I       +  S    + D    + +SE   
Sbjct: 498  LNLKTSRMDAEDQGEDLSQKDIDETFAAKIFISTSTEIYESKTTPDNDDSSAVTKSEAMR 557

Query: 1737 VFPGS-------FYGDPSEAFNQTVGNDATLENTERAATVLNYTKNAD-EEMNLSSVPCT 1892
            +  GS        Y D       +V +D TLE       + N ++ +   E+   +   T
Sbjct: 558  IASGSEVILDDRGYID-EMLITTSVESDTTLERIGNMEKLQNVSEGSHVSELAKLNESYT 616

Query: 1893 EGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQRKQLAVQKNKE 2072
            +G+L L +QAVE G A+VL D NLDAD V++K+V FA++AP GPVF  Q +   VQK++ 
Sbjct: 617  QGVLELLKQAVEIGSAVVL-DANLDADAVYQKAVAFAQSAPPGPVFRRQPRNTVVQKSEM 675

Query: 2073 QERDDNSGSKEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKADYLNVVPQGNLRIDEL 2252
            QE   N   + K+      T  +  G  +ERK+S+  + K     Y++ VPQG+LR+DEL
Sbjct: 676  QE---NGELEVKQV-----TSFSKMGGGSERKSSKVRR-KYFNEQYVDSVPQGSLRVDEL 726

Query: 2253 AKLLA 2267
            AKLLA
Sbjct: 727  AKLLA 731


>ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 804

 Score =  641 bits (1654), Expect = 0.0
 Identities = 368/786 (46%), Positives = 470/786 (59%), Gaps = 78/786 (9%)
 Frame = +3

Query: 144  RLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSAL---TIAHNYNPAPPHPT 314
            R PTE+RF+RWNNANA+KF +  R Q+E+ED  R E+RFDSA    T++   +      T
Sbjct: 28   RPPTEVRFARWNNANAEKFNQRRRAQQEIEDDFRRERRFDSATRIATVSVAGSSTSDAET 87

Query: 315  TFXXXXXXXXXXXXXXXXXXXXXXXTPS-RKTLHPAFKPLPRPRKIP-VNENETEKSSGL 488
             F                        P+   + HPAF+ + +P K+  +   + E     
Sbjct: 88   AFKSIGTPSSPSRPSIPGKKSKYSENPNPNPSSHPAFRRVIKPTKLSSITREKPEVDRKA 147

Query: 489  NFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXX 668
            N  I ++G+SY I  APF ++YSYTETPK KP+KLREP  +PFGP TM +PW GR     
Sbjct: 148  NISIGDDGLSYVIDGAPFEFKYSYTETPKQKPIKLREPPYAPFGPTTMGRPWTGRAPLPA 207

Query: 669  XXXXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIK 848
                  EFDSFQLPPPHKKGV+PVQ+PGP+LPGSGPKYV+SREE+LG PLT +E+++L+ 
Sbjct: 208  SKKKMKEFDSFQLPPPHKKGVRPVQSPGPYLPGSGPKYVKSREEILGDPLTDQEVKDLVN 267

Query: 849  GSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGK 1028
            G  K+ RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDM+NVCQQLEE+TGGK
Sbjct: 268  GCIKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMENVCQQLEERTGGK 327

Query: 1029 IIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRG 1208
            IIY RGGVI+LFRGRNYNYK+RPRFPLMLW+P+TPVYPRLIQR PEGLT+EEA +MRK+G
Sbjct: 328  IIYRRGGVIFLFRGRNYNYKTRPRFPLMLWRPITPVYPRLIQRAPEGLTVEEATEMRKKG 387

Query: 1209 SYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLL 1388
              L PI KL KNGVY DLV NVREAFE CELVRI+CQG+N SDY+KIGAKLKDLVPCVL+
Sbjct: 388  RDLIPIRKLGKNGVYSDLVDNVREAFEECELVRIDCQGMNGSDYRKIGAKLKDLVPCVLI 447

Query: 1389 SFECEHILVWRGRDWQ-SLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXXCIMEDKPN 1565
            SFE E IL+WRGR+W+ SL+ P+ +LK ++E   DD                C       
Sbjct: 448  SFERESILMWRGREWKSSLVNPESNLKEVKESNVDDSPSIALSLEGEDASTVCAFTGSVK 507

Query: 1566 DLEISLSPTYSNEESQGNSELTEVEAEDIAKVPDAPVIASHAVLNGDGII---------- 1715
            D    +  T     S  +S    V AE       +P I   A+++    +          
Sbjct: 508  DANPEMIDT-----SISSSIAEVVGAEGTEDPSPSPYIEPPAIIDTVSDVGSTCETVTIS 562

Query: 1716 -------DESE------KSPVFP--GSFYGDPSEAFNQTVGNDATLENTERA-------- 1826
                   DE+E       S V P   S+  D SE  + T G +  L+NT  A        
Sbjct: 563  DIKGFRDDEAELNMKAYSSLVIPEDTSYADDESETISSTSGTEDILDNTRHADEASPTTS 622

Query: 1827 ---ATVLNYTKNADEEMN-LSSVP-------------------------CTEGILLLREQ 1919
                 +L   +N + ++N L   P                         C E +L L  +
Sbjct: 623  VGTGAILVTVENTETKLNTLMESPGSNKTPQDASVASQNLNERAKLCAACKEKVLSLLNE 682

Query: 1920 AVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVF--------SLQRKQLAVQKNKEQ 2075
            AV +G AL+LDD +LDAD +++++VD AK+AP GPVF        +  RK+L V+K K++
Sbjct: 683  AVGSGSALILDDSSLDADIIYQRAVDLAKSAPPGPVFKHRSSRGSAQMRKKLVVRKQKQE 742

Query: 2076 ERDDNSGSKEKEAGAALGTEVTVPGRRNERKTSR--NEKLKDIKADYLNVVPQGNLRIDE 2249
              +     + KE             +R+ERK S+    + +D      ++VPQG+LR+DE
Sbjct: 743  ATE----LEVKEITVYDMQRNLGEKKRSERKDSKVHRTRTRDFGEPLDSIVPQGSLRVDE 798

Query: 2250 LAKLLA 2267
            LAKLLA
Sbjct: 799  LAKLLA 804


>gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]
          Length = 792

 Score =  640 bits (1651), Expect = 0.0
 Identities = 369/778 (47%), Positives = 467/778 (60%), Gaps = 69/778 (8%)
 Frame = +3

Query: 141  HRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPTT- 317
            HRLPTE+RFSRWNNANA+KF    R  +++ED IR ++RFDSA  I+   + A P     
Sbjct: 24   HRLPTELRFSRWNNANAEKFNERRRTLQQIEDDIRRQRRFDSATRISDIPDSASPSTAGS 83

Query: 318  -----FXXXXXXXXXXXXXXXXXXXXXXXTPSRK---TLHPAFKPLPRPRKIPVNE---- 461
                 F                        P+       HPAF+PL R RKI V E    
Sbjct: 84   ATGEFFKSIGTPSSPSRPSIPGKKSKYSKNPNPSFDSRSHPAFRPLRRVRKIAVKELSGL 143

Query: 462  --NETEKSSGLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMA 635
              ++ +     + R+ E+GVSY I  APF ++YSYTETPK +PVKLRE   +PFGP TM 
Sbjct: 144  PKDKRDVERKADVRVGEDGVSYVIDGAPFEFKYSYTETPKAQPVKLREAPYAPFGPTTMP 203

Query: 636  KPWLGRXXXXXXXXXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTP 815
            +PW GR           EFDSF+L PPHKKGVKPVQAPGPFLPGSGPKYV SREE+LG P
Sbjct: 204  RPWTGRAPLPPSKKKLKEFDSFRLSPPHKKGVKPVQAPGPFLPGSGPKYVMSREEILGEP 263

Query: 816  LTKEEIEELIKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNV 995
            LT+EEI++LI+G +K+ RQ+NMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNV
Sbjct: 264  LTEEEIKDLIEGCRKTKRQMNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 323

Query: 996  CQQLEEKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLT 1175
             +QLEE+TGGKIIY +GGVI+LFRGRNYNY++RPRFPLMLWKPVTPVYPRL++RVPEGLT
Sbjct: 324  KEQLEERTGGKIIYGKGGVIFLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLVKRVPEGLT 383

Query: 1176 LEEANDMRKRGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGA 1355
            LEEA +MRK+G  L PICKL KNGVY +LVK+VREAFE CELVRINCQG+N SDY+KIGA
Sbjct: 384  LEEAKEMRKKGHKLMPICKLGKNGVYHNLVKHVREAFEECELVRINCQGMNGSDYRKIGA 443

Query: 1356 KLKDLVPCVLLSFECEHILVWRGRDWQSLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXX 1535
            KLKDLVPCVLLSF  EHIL+WRG DW+S L   + +K   E K+ DV             
Sbjct: 444  KLKDLVPCVLLSFAFEHILIWRGCDWKSSLP--KLVKDRDEAKESDVQIVTSVAPSVEGE 501

Query: 1536 XXCIMEDKPNDLEISLSPTYSNEE-------SQGNSELTEVE-AEDIAKVPDAP----VI 1679
               +     ND  + L  T S          ++G  + + VE  E  +   D        
Sbjct: 502  EVAMSTGSVNDASLELISTTSTLNRSHEVIGTEGREDSSSVEYVEPCSTTGDVSNEIKTF 561

Query: 1680 ASHAVLNGDGIIDESEKSPVFPGSFYGDPSEAFNQTVGNDATLE---------------- 1811
            A+  + +    +D+         S+ G  SE          ++E                
Sbjct: 562  ATEKISDVQIPVDD-RLGDTSNTSYNGTTSENSGSNGTRSDSIECDGLSTAMLGLDTIIP 620

Query: 1812 -----NTERAATVLNYTKNADEEMNLSS-------------VPCTEGILLLREQAVENGM 1937
                 N E  + +      A+E+  + S              PCTEG+L L +QAV  G+
Sbjct: 621  KVADGNAEMKSALFEADSLANEKEQVPSEVLQDVNQPTRLNAPCTEGVLSLLQQAVVGGL 680

Query: 1938 ALVLDDHNLDADTVFKKSVDFAKTAPTGPVF-----SLQRKQLAVQKNK--EQERDDNSG 2096
            A++LD+ NLD+D V++++V F+++AP GPVF      +  K++ V+ ++  E E+ D   
Sbjct: 681  AIILDEDNLDSDVVYQRTVAFSQSAPPGPVFKGRPRKMLPKKVMVKNSEVLENEKQDTED 740

Query: 2097 SKEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKADYLN-VVPQGNLRIDELAKLLA 2267
               KE       E       + +K S+  + KD   +  N VVPQG+LR+DELAKLLA
Sbjct: 741  FAPKEIRTIYVKE------GSGKKASKARRRKDFGENLDNVVVPQGSLRVDELAKLLA 792


>ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
            gi|223524018|gb|EEF27274.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 748

 Score =  634 bits (1635), Expect = e-179
 Identities = 352/739 (47%), Positives = 463/739 (62%), Gaps = 30/739 (4%)
 Frame = +3

Query: 141  HRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPTTF 320
            HR P++I FSRWNNANA++F    R QKE+E+ IR  +RF+SA  I  NY+ A  +    
Sbjct: 28   HRPPSDIHFSRWNNANAREFNDRRRAQKEIEEDIRRNRRFNSAANIIDNYDSATSNENFK 87

Query: 321  XXXXXXXXXXXXXXXXXXXXXXXTPSRKTLH-PAFKPLPRPRKIPVNENETEKSSGLNFR 497
                                    P   T H PAF+ + +  K P+ E   ++++ +  +
Sbjct: 88   SKSIGTPSSPSAPSIPGRKSKYSKPESPTSHHPAFRSISKITKKPLPEKPIDRNADV--K 145

Query: 498  IDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXXXX 677
            + E+G+S+ +  APF ++YSYTETPK KP+KLRE   SPFGP TM +PW GR        
Sbjct: 146  LSEDGLSFVVDGAPFEFKYSYTETPKAKPIKLREAPFSPFGPTTMGRPWTGRAPLPPSKK 205

Query: 678  XXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKGSK 857
               EFDSF+LPPP KKGVKPVQ PGPFLPG+GP+YV SREE+LG PLT EE++ LI+G  
Sbjct: 206  KLREFDSFKLPPPDKKGVKPVQKPGPFLPGAGPRYVYSREEILGEPLTTEEVKILIEGCL 265

Query: 858  KSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIY 1037
            K+ RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKC GVCTVDMDNVCQQLEE+TGGK+IY
Sbjct: 266  KTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMDNVCQQLEERTGGKVIY 325

Query: 1038 NRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGSYL 1217
             +GGV+YLFRGRNYNY++RPRFPLMLWKPVTPVYPRLI+R PEGLTLEEA++MR++G  L
Sbjct: 326  RKGGVVYLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLIKRAPEGLTLEEASEMRRKGRKL 385

Query: 1218 TPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLSFE 1397
             PICKLAKNGVYC+LVK VREAFE CELVRI+CQG+N SDY+K+GAKLK+LVPC+L+SFE
Sbjct: 386  IPICKLAKNGVYCNLVKEVREAFEECELVRIDCQGVNGSDYRKVGAKLKELVPCLLISFE 445

Query: 1398 CEHILVWRGRDWQSLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXXCIMEDKPNDLEI 1577
             EHIL+WRGRDW+S +        ++ V D   A               ++ED+      
Sbjct: 446  HEHILMWRGRDWKSSM--------IKPVNDSVEA--IGSDVNSATSIASVLEDQ------ 489

Query: 1578 SLSPTYSNEESQGNSELTEVEAEDIAKVPDAPVI---ASHAVLNGDGIIDESEKSPVFP- 1745
             +    S+E+     +++ +    + +  + P I    S A+      ++ SE +P+   
Sbjct: 490  -IMEIVSHEDGLSKPDMSTIPVGSMDEQAEHPSILDGTSVAIGASSTTVEMSEINPMTES 548

Query: 1746 -GSFYGDPSEAFNQTVGNDATLENTERA-----------ATVLNYTKNADEEMNLS---- 1877
              S     SE  N  VG+++ + N + A            TVL    +  E  ++S    
Sbjct: 549  GSSSAVSESEVINNAVGSESVVNNMDPANEMPVAMSVSSETVLESVGSKKELHDVSIECS 608

Query: 1878 ---------SVPCTEGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVF 2030
                     SV   + +LLL +QAVE+G AL+L D +LDAD V++++V FAK+AP GPVF
Sbjct: 609  DDVNKPANLSVSYADRVLLLWKQAVESGSALILVDADLDADIVYQRAVAFAKSAPPGPVF 668

Query: 2031 SLQRKQLAVQKNKEQERDDNSGSKEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKADY 2210
              + K+ +++K+++QE  D S  KE      L T V+       + +    K K  +   
Sbjct: 669  RHRSKKASIRKSEKQESKD-SEPKEFLNLEYLETNVSQTMGSENKSSKPQRKKKSREQQN 727

Query: 2211 LNVVPQGNLRIDELAKLLA 2267
            LN    G L +DELAKLLA
Sbjct: 728  LNSARLGRLGVDELAKLLA 746


>ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus] gi|449521361|ref|XP_004167698.1| PREDICTED:
            CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus]
          Length = 745

 Score =  621 bits (1601), Expect = e-175
 Identities = 352/741 (47%), Positives = 455/741 (61%), Gaps = 31/741 (4%)
 Frame = +3

Query: 138  THRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPT- 314
            +HR  TEIRFSRW NANA+KF +  R+Q+E+ED+IR E+RF SA  I    +   P    
Sbjct: 23   SHRTLTEIRFSRWYNANAEKFEQRRRSQQEIEDEIRRERRFSSAAKIVDLCDSDSPSSAI 82

Query: 315  ----TFXXXXXXXXXXXXXXXXXXXXXXXTPSRKTLHPAFKPLPRPRKIPVNENETEKSS 482
                TF                        P+  +  P F+ + + +K      E     
Sbjct: 83   DRNETFRSVGTPSSPSRPSIPGRKSKYSKNPNPDSPSP-FRQVSKTKKTMNAPEERHIGV 141

Query: 483  GLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXX 662
              N  + E+GVSY I  APF ++YSYTETPKVKP+KLREP  +PFGP TM++PW GR   
Sbjct: 142  EANVSLSEDGVSYVIDGAPFEFKYSYTETPKVKPIKLREPY-APFGPTTMSRPWTGRAPL 200

Query: 663  XXXXXXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEEL 842
                    EFDSFQLPP +KKGVKPVQAPGPFL GSGPKYV SREE+LG PLTKEEI+ L
Sbjct: 201  PPSKKKLPEFDSFQLPPKNKKGVKPVQAPGPFLAGSGPKYVMSREEILGEPLTKEEIKAL 260

Query: 843  IKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTG 1022
            I+G   SNRQLN+GRDGLTHNML+NIHALWKRRRVCKIKCKGVCTVDMDNV QQLEE+TG
Sbjct: 261  IRGCINSNRQLNIGRDGLTHNMLENIHALWKRRRVCKIKCKGVCTVDMDNVKQQLEERTG 320

Query: 1023 GKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRK 1202
            GKIIY+RGG +YL+RGRNYNYK+RPRFPLMLWKP  PVYPRL++ +P+GLTLEE  +MRK
Sbjct: 321  GKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLVKHIPDGLTLEEVTEMRK 380

Query: 1203 RGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCV 1382
            +G  L PICKL KNGVY  LVK+VREAFE CELVRINCQGLN SD++KIGAKLKDLVPCV
Sbjct: 381  KGRKLIPICKLGKNGVYSALVKHVREAFEECELVRINCQGLNGSDFRKIGAKLKDLVPCV 440

Query: 1383 LLSFECEHILVWRGRDWQSLL-------------------------EPDESLKG-LQEVK 1484
            L+SFE EHIL+WRGRDW+S L                         E D S+K  L  + 
Sbjct: 441  LISFESEHILLWRGRDWKSSLPYIERNPEGAKAHGTDETTIVAPSIEQDVSVKNTLTSLD 500

Query: 1485 DDDVAXXXXXXXXXXXXXXCIMEDKPNDLEISLSPTYSNEESQGNSELTEVEAEDIAKVP 1664
             +D++               I      D++   +  + +     + E T ++ + +    
Sbjct: 501  SEDLSTGGNEDPDSMIAEKSISA----DVDSLTTTMHESNFVSYDEEATGLDDQKLHTAT 556

Query: 1665 DAPVIASHAVLNGDGIIDESEKSPVFPGSFYGDPSEAFNQTVGNDATLENTERAATVLNY 1844
             +  + S + ++G     E E    F  S + D +E   Q   +  ++  T  + T   Y
Sbjct: 557  TSEDLDSWSTISGGE--SEIESGYEFSDSDF-DEAEPMEQLEFD--SIAATGNSETNGLY 611

Query: 1845 TKNADEEMNLSSVPCTEGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGP 2024
            T    + +   +   T+G+L L +QAVENG A+VLD  +LDAD ++++SV F+++AP  P
Sbjct: 612  TSEGSQALTKPTSNATDGVLQLLKQAVENGSAVVLDSSSLDADVIYQQSVAFSQSAPPSP 671

Query: 2025 VFSLQRKQLAVQKNKEQERDDNSGSKEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKA 2204
            VF  +R++       E+E       KE+E      T V++    +++K S+ +K K+   
Sbjct: 672  VFKHERRKKVAADKSEEETSRELEVKEEE------TAVSMEVGNDKKKDSKTKKNKNF-G 724

Query: 2205 DYLNVVPQGNLRIDELAKLLA 2267
            +Y    PQG+L +DELAKLLA
Sbjct: 725  EYNFSSPQGSLGVDELAKLLA 745


>ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]
            gi|75266026|sp|Q9SL79.2|CAF1P_ARATH RecName:
            Full=CRS2-associated factor 1, chloroplastic; AltName:
            Full=Chloroplastic group IIA intron splicing facilitator
            CRS2-associated factor 1; Flags: Precursor
            gi|15028051|gb|AAK76556.1| unknown protein [Arabidopsis
            thaliana] gi|20197570|gb|AAD24394.2| expressed protein
            [Arabidopsis thaliana] gi|28393847|gb|AAO42331.1| unknown
            protein [Arabidopsis thaliana]
            gi|330251862|gb|AEC06956.1| CRS2-associated factor 1
            [Arabidopsis thaliana]
          Length = 701

 Score =  617 bits (1590), Expect = e-174
 Identities = 348/729 (47%), Positives = 450/729 (61%), Gaps = 21/729 (2%)
 Frame = +3

Query: 144  RLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNP----APPHP 311
            R P+EIRFSRW NANA++F +  R+Q+ELE +IR ++RFD+A  I H ++     A P  
Sbjct: 23   RAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRRFDAATKIVHTHDSEAAAAEPKT 82

Query: 312  TTFXXXXXXXXXXXXXXXXXXXXXXXTPSRKTLHPAFKPLP-RPRKIP-VNENETEKSSG 485
            + F                        P R++ +      P RP+  P V ++  +  + 
Sbjct: 83   SPFRSRGTPSLPSARSI----------PGRRSKYSKPDSGPNRPKNKPRVPDSPPQLDAK 132

Query: 486  LNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXX 665
               ++ E+G++Y I  APF ++YSYTETPKVKP+KLREP  +PFGP TM +PW GR    
Sbjct: 133  PEVKLSEDGLTYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLP 192

Query: 666  XXXXXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELI 845
                   EFDSF+LPP  KKG+KPVQ PGPF PG GP+YV S+EE+LG PLTKEE+ EL+
Sbjct: 193  QSQKTPREFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVYSKEEILGEPLTKEEVRELV 252

Query: 846  KGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGG 1025
                K+ RQLNMGRDGLTHNML+NIH LWKRRRVCKIKCKGVCTVDMDNVC+QLEEK GG
Sbjct: 253  TSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLEEKIGG 312

Query: 1026 KIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKR 1205
            K+IY RGGV++LFRGRNYN+++RPRFPLMLWKPV PVYPRLIQ+VPEGLT +EA +MR++
Sbjct: 313  KVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATNMRRK 372

Query: 1206 GSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVL 1385
            G  L PICKL KNGVYCDLVKNV+EAFE CELVRI+CQG+  SD++KIGAKLKDLVPCVL
Sbjct: 373  GRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVL 432

Query: 1386 LSFECEHILVWRGRDWQ-SLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXXCIMEDKP 1562
            +SFE E IL+WRGR+W+ SL  PD+    L++++ D                       P
Sbjct: 433  VSFENEQILIWRGREWKSSLTTPDKKGDILEDIEVDTAL--------------------P 472

Query: 1563 NDLEISLSPTYSNEESQGNSELTEVEAEDIAKVPDAPVIASHAVLNGDGIIDESEKSPVF 1742
             D E S+SP     +SQ  ++   +++ ++   PD   ++   V       D SE     
Sbjct: 473  EDDEPSVSP----NQSQTMTQNPPLDSMELQNDPDGHDLSPSTV-------DSSEMEGTI 521

Query: 1743 PGSFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNLSSVPCTEGILLLREQA 1922
                     +    TV  D+ L + E             EE++  S+   E +L+L +QA
Sbjct: 522  NSLQSWSTKDVTEPTV--DSFLRDLEEPED----EPETSEEISKQSI---ERVLILMKQA 572

Query: 1923 VENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSL-QRKQLAVQKNKEQE------- 2078
            VE+G ALVLD  +LDADTVF K+V F+  A  GPVF    RKQ  V+K + QE       
Sbjct: 573  VESGTALVLDAADLDADTVFSKAVAFSSVASPGPVFQHGLRKQPTVKKQESQEFGYGDLE 632

Query: 2079 -RDDN-----SGSKEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKADYLNVVPQGNLR 2240
             +  N     + SK          EV   G R E++    +K+ +   DY  V+P G L+
Sbjct: 633  AKSSNVVVSRNASKSSNVVVFGKREVAERGEREEKEEGSKKKMDEFAEDYREVMPHGTLK 692

Query: 2241 IDELAKLLA 2267
            +DELAKLLA
Sbjct: 693  VDELAKLLA 701


>ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
            lyrata] gi|297331845|gb|EFH62264.1| hypothetical protein
            ARALYDRAFT_480467 [Arabidopsis lyrata subsp. lyrata]
          Length = 700

 Score =  614 bits (1584), Expect = e-173
 Identities = 347/726 (47%), Positives = 440/726 (60%), Gaps = 18/726 (2%)
 Frame = +3

Query: 144  RLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYN--PAPPHPTT 317
            R P+EIRFSRW NANA++F +  R+Q+ELE +IR ++RFD+A  I H ++   A   P T
Sbjct: 23   RAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRRFDAATKIVHTHDSEAAASEPKT 82

Query: 318  FXXXXXXXXXXXXXXXXXXXXXXXTPSRKTLH--PAFKPLPRPRKIPVNENETEKSSGLN 491
                                     P R++ +  P   P     K  V ++  +  +   
Sbjct: 83   --------SPFRSRGTPSLPSARSIPGRRSKYSKPDSGPNKPKNKPRVPDSPPQLDAKPE 134

Query: 492  FRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXX 671
             ++ E+G+SY I  APF ++YSYTETPKVKP+KLREP  +PFGP TM +PW GR      
Sbjct: 135  VKLSEDGLSYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQS 194

Query: 672  XXXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKG 851
                 EFDSF+LPP  KKGVKPVQ PGPF PG GP+YV ++EE+LG PLTKEEI EL+  
Sbjct: 195  QKTPREFDSFRLPPDGKKGVKPVQKPGPFRPGLGPRYVYTKEEILGEPLTKEEIRELVTS 254

Query: 852  SKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKI 1031
              K+ RQLNMGRDGLTHNML+NIH LWKRRRVCKIKCKGVCTVDMD VC+QLEEK GGK+
Sbjct: 255  CLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDKVCEQLEEKIGGKV 314

Query: 1032 IYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGS 1211
            IY RGGV++LFRGRNYN+++RPRFPLMLWKPV PVYPRLIQ+VPEGLTL+EA +MR++G 
Sbjct: 315  IYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTLQEATEMRRKGR 374

Query: 1212 YLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLS 1391
             L PICKL KNGVYCDLVKNV+EAFE CELVRI+CQG+  SD++KIGAKLKDLVPCVL+S
Sbjct: 375  ELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLIS 434

Query: 1392 FECEHILVWRGRDWQSLLE-PDESLKGLQEVKDDDVAXXXXXXXXXXXXXXCIMEDKPND 1568
            FE E IL+WRGR+W+S L  PD+    L++++ D                       P D
Sbjct: 435  FENEQILIWRGREWKSSLTIPDKKDDILEDIEVDAAL--------------------PED 474

Query: 1569 LEISLSPTYSNEESQGNSELTEVEAEDIAKVPDAPVIASHAVLNGDGIIDESEKSPVFPG 1748
             E S+SP  +   +Q                   P + S  + N  G  D S  +  F  
Sbjct: 475  DEASVSPNQTQTVTQN------------------PPLDSMELQNDPGGHDLSPSTVDF-- 514

Query: 1749 SFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNLSSVPCTEGILLLREQAVE 1928
            S   D S +       D T    + +       ++  E     S    E +L L +QAVE
Sbjct: 515  SAMEDTSNSLQSPSTKDLTEPTADSSIQDHEEPEHEPETSEEISKQSIERVLNLMKQAVE 574

Query: 1929 NGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSL-QRKQLAVQKNKEQE-----RDDN 2090
            +G ALVLD  +LDADTVF K+V F+  A  GPVF    RKQ  V+K + +E      +  
Sbjct: 575  SGTALVLDAADLDADTVFSKAVTFSTVASPGPVFQHGLRKQPTVKKQESREFGYRNLEAK 634

Query: 2091 SGSKEKEAGAALGTEVTVPGRR-------NERKTSRNEKLKDIKADYLNVVPQGNLRIDE 2249
            S +      A+  + V V G+R        E K    +K+ +   DY  V+P G L++DE
Sbjct: 635  SSNVVVSRNASKSSNVVVSGKREVAVSGEREEKEGLKKKMDEFAEDYREVIPHGTLKLDE 694

Query: 2250 LAKLLA 2267
            LAKLLA
Sbjct: 695  LAKLLA 700


>ref|XP_006408916.1| hypothetical protein EUTSA_v10001924mg [Eutrema salsugineum]
            gi|557110072|gb|ESQ50369.1| hypothetical protein
            EUTSA_v10001924mg [Eutrema salsugineum]
          Length = 678

 Score =  609 bits (1571), Expect = e-171
 Identities = 344/718 (47%), Positives = 440/718 (61%), Gaps = 10/718 (1%)
 Frame = +3

Query: 144  RLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPP--HPTT 317
            R P EIRFSRW NANA++F +  R+Q+ELE +IR ++RFD+A +I H ++ A     P T
Sbjct: 23   RGPGEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRRFDAATSIVHTHDSAAAASEPKT 82

Query: 318  FXXXXXXXXXXXXXXXXXXXXXXXTPSRKTLH--PAFKPLPRPRKIPVNENETEKSSGLN 491
                                     P R++ +  P   P     K  V ++  +  +   
Sbjct: 83   --------SPFRSRGTPSLPSARSIPGRRSKYSKPDSGPTKPKNKPKVPDSPPQLDAKPE 134

Query: 492  FRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXX 671
             ++ E+G+SY I  APF ++YSYTETPKVKP+KLREP  +PFGP TM +PW GR      
Sbjct: 135  VKLSEDGLSYVIDGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQS 194

Query: 672  XXXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKG 851
                 EFDSF+LPP  KKGVKP+Q PGPF PG GP+YV ++EE+LG PLTKEEI EL+  
Sbjct: 195  QKTPREFDSFRLPPVGKKGVKPIQKPGPFRPGVGPRYVYTKEEILGEPLTKEEIRELVTS 254

Query: 852  SKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKI 1031
              K+ RQLNMGRDGLTHNML+NIH LWKRRRVCKIKCKGVCTVDMDNVC+QLEEK GGK+
Sbjct: 255  CLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKV 314

Query: 1032 IYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGS 1211
            IY RGGVI+LFRGRNYN+++RPRFPLMLWKPV PVYPRLIQ+VPEGLT +EA +MR++G 
Sbjct: 315  IYRRGGVIFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATEMRRKGR 374

Query: 1212 YLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLS 1391
             L PICKL KNGVYCDLVKNV+EAFE CELVRI+CQG+  SD++KIGAKLKDLVPCVL+S
Sbjct: 375  ELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLIS 434

Query: 1392 FECEHILVWRGRDWQ-SLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXXCIMEDKPND 1568
            FE E IL+WRGR+W+ SL  PD+    L +++ D                      + +D
Sbjct: 435  FENEQILIWRGREWKSSLTTPDKKDDILGDIEVDTAL------------------PEGDD 476

Query: 1569 LEISLSPTYSNEESQGNSELTEVEAEDIAKVPDAPVIASHAVLNGDGIIDESEKSPVFPG 1748
             E S SP  +   +Q NS L   E ++     D        +L  +G     + S     
Sbjct: 477  DEASESPNQTQVVTQ-NSPLGSKELQNDQSAVD--------ILAMEGRNSSLQSSSTERD 527

Query: 1749 SFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNLSSVPCTEGILLLREQAVE 1928
            +  GD  E                         +   EE+N  S+   E +L L +QAVE
Sbjct: 528  NSLGDHQE------------------------PEEESEEINTQSI---ERVLNLMKQAVE 560

Query: 1929 NGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQRKQLAVQKNKEQERD---DNSGS 2099
            +G A+VL+  +LDADTVF KSV F+  A  GPVF    ++  + K +E  R+    N  +
Sbjct: 561  SGNAIVLEATDLDADTVFAKSVAFSSVATPGPVFQHGLRKEPMVKKQENHREFGYQNLEA 620

Query: 2100 KEKEAGAALGTEVTVPGRRNERKTSR--NEKLKDIKADYLNVVPQGNLRIDELAKLLA 2267
            K      +   EV V   R+E+K      +KL++   DY  V+P G L++DELAKLLA
Sbjct: 621  KTSNVVFSREKEVAVGVERDEKKEKEGLKKKLEEFDEDYREVIPHGTLKVDELAKLLA 678


>ref|XP_006297110.1| hypothetical protein CARUB_v10013113mg [Capsella rubella]
            gi|482565819|gb|EOA30008.1| hypothetical protein
            CARUB_v10013113mg [Capsella rubella]
          Length = 689

 Score =  599 bits (1545), Expect = e-168
 Identities = 343/716 (47%), Positives = 444/716 (62%), Gaps = 8/716 (1%)
 Frame = +3

Query: 144  RLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPTTFX 323
            R P+EIRFSRW NANA++F +  R+Q+ELE +IR ++RFD+A  I H       H +   
Sbjct: 23   RAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRRFDAATKIVHT------HDSDAA 76

Query: 324  XXXXXXXXXXXXXXXXXXXXXXTPSRKTLH--PAFKPLPRPRKIPVNENETEKSSGLNFR 497
                                   P R++ +  P   P     K  V ++  +  +    +
Sbjct: 77   ASESKTSPFRSRGTPSLPSARSIPGRRSKYSKPDSGPNKPKNKPRVPDSPPQLDAKAEVK 136

Query: 498  IDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXXXX 677
            + E+G+SY I  APF ++YSYTETPKVKP+KLREP  +PFGP TM +PW GR        
Sbjct: 137  LSEDGLSYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQSQK 196

Query: 678  XXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKGSK 857
               +FDSF+LPP  KKGVKPVQ PGPF PG GP+YV ++EE+LG PLTKEEI EL+    
Sbjct: 197  TPRDFDSFRLPPVGKKGVKPVQKPGPFRPGIGPRYVYTKEEILGEPLTKEEIRELVTSCL 256

Query: 858  KSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIY 1037
            K+ RQLNMGRDGLTHNML+NIH LWKRRRVCKIKCKGVCTVDMDN+C+QLEEK GGK+IY
Sbjct: 257  KTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNICEQLEEKIGGKVIY 316

Query: 1038 NRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGSYL 1217
             RGGV++LFRGRNYN+++RPRFPLMLWKPV PVYP+LIQ+VPEGLT  EA +MR++G  L
Sbjct: 317  RRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPKLIQQVPEGLTRLEATEMRRKGREL 376

Query: 1218 TPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLSFE 1397
             PICKL KNGVYCDLVKNV+EAFE CELVRI+CQGL  SD++KIGAKLKDLVPCVL+SFE
Sbjct: 377  MPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGLKASDFRKIGAKLKDLVPCVLISFE 436

Query: 1398 CEHILVWRGRDWQ-SLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXXCIMEDKPNDLE 1574
             E IL+WRGR+W+ SL  PD+    L++++ D                    +D+P+   
Sbjct: 437  NEQILIWRGREWKSSLTTPDKKDDYLRDIEVDTALPE---------------DDEPS--- 478

Query: 1575 ISLSPTYSNEESQGNSELTEVEAEDIAKVPDAPVIASHAVLNGDGIIDESEKSPVFPGSF 1754
               SP       Q NS L  +E+++    PD   ++   V   D +  E   S +   S 
Sbjct: 479  ---SPDQPQTVIQ-NSPLGSMESQN---NPDGHDLSPSTV---DFLAMEGTSSSL--RSL 526

Query: 1755 YGDPSE-AFNQTVGNDATLENTERAATVLNYTKNADEEMNLSSVPCTEGILLLREQAVEN 1931
              D +E   + ++G+D   E     +          EE++  S+   E +L L  QAVE+
Sbjct: 527  STDVTELTADSSLGDDQEPEPEPEKS----------EEISKQSI---ERVLNLMNQAVES 573

Query: 1932 GMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSL-QRKQLAVQKNKEQERDDNS-GSKE 2105
            G ALVLD   LDADTVF K+V F+  A  GP F    RKQ  V+K +++E    S  +K 
Sbjct: 574  GTALVLDSTELDADTVFAKAVAFSAVAAPGPAFQHGLRKQPMVKKQEKRESGYRSVEAKV 633

Query: 2106 KEAGAALGTEVTVPGRRNERKT--SRNEKLKDIKADYLNVVPQGNLRIDELAKLLA 2267
                  +  EV    +R E++      +K+ +   DY  V+P G L++DELAKLLA
Sbjct: 634  SNVVVTVKKEVAFSVKREEKEEEGGLKKKIDEFDEDYREVLPHGTLKVDELAKLLA 689


>ref|XP_004503464.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 1,
            chloroplastic-like [Cicer arietinum]
          Length = 706

 Score =  594 bits (1532), Expect = e-167
 Identities = 331/670 (49%), Positives = 415/670 (61%), Gaps = 48/670 (7%)
 Frame = +3

Query: 399  RKTLHPAFKPLPRPR----KIPVNENETEKSSGLNFRIDENGVSYEIPEAPFVYQYSYTE 566
            R T  P   P   P      IP   ++    +  N +I ++G+SY I  APF ++YSYTE
Sbjct: 38   RPTTKPKLDPQSHPALKFSNIPKQTSKPVSKASENVKISDDGLSYVIEGAPFEFKYSYTE 97

Query: 567  TPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXXXXXXXEFDSFQLPPPHKKGVKPVQA 746
            TPK KP+KLREP   PFGP TM +PW GR           EFDSF LPPPHKKGVKPVQ+
Sbjct: 98   TPKAKPLKLREPGFLPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKGVKPVQS 157

Query: 747  PGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKGSKKSNRQLNMGRDGLTHNMLDNIHA 926
            PGP+LPG+ PKYVRSREEVLG PLTKEEI+ L++   KS+RQLNMGRDG THNMLDNIHA
Sbjct: 158  PGPYLPGTSPKYVRSREEVLGEPLTKEEIKVLVQSCLKSSRQLNMGRDGFTHNMLDNIHA 217

Query: 927  LWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFP 1106
             WKRRRVCKIKC GVCTVDMDNVC QLEEKTGGK+IY RGGV+YLFRGRNYNYK+RP FP
Sbjct: 218  HWKRRRVCKIKCLGVCTVDMDNVCHQLEEKTGGKVIYRRGGVLYLFRGRNYNYKTRPLFP 277

Query: 1107 LMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGSYLTPICKLAKNGVYCDLVKNVREAF 1286
            LMLWKPV PVYP+LIQRVPEGLTLEEA +MR++G  LTPICK+ KNGVY +LVKNVREAF
Sbjct: 278  LMLWKPVPPVYPKLIQRVPEGLTLEEATEMRQKGRTLTPICKIGKNGVYFNLVKNVREAF 337

Query: 1287 EACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLSFECEHILVWRGRDWQSLLE------ 1448
            E CELVRINCQGLN SDY+KIGAKL+DLVPC LLS+E EHIL+WRGR+W+  L       
Sbjct: 338  EECELVRINCQGLNKSDYRKIGAKLRDLVPCTLLSYENEHILMWRGRNWKPSLPDLRDDR 397

Query: 1449 ----------------PDESLKGLQEVKDDDVAXXXXXXXXXXXXXXCIMEDKPNDLEIS 1580
                            P E+L        ++ A              C+ +   + +E+ 
Sbjct: 398  KEANKVDPDNKNYKALPSEALDVSAPNLHNNPAELVSNLSHDTSISFCLDDVTVDKVEVP 457

Query: 1581 LSPTYSNEESQ---GNSELTEVEAEDIAKVPDAPVIASHAVLNGDG---------IIDES 1724
              PT +++ S     ++E+T V  +   +       +    ++ DG         + D  
Sbjct: 458  -CPTKNSKRSMSVIADAEITNVATDSYGEPEPCRSTSPGTNISHDGGHITCPSNAMSDNH 516

Query: 1725 EKSPVFPGSFYGDPSEAFNQTVGNDATLENTE---------RAATVLNYTKNAD-EEMNL 1874
            E   +                 G+DA L +++         RA  +L+ +   D   ++ 
Sbjct: 517  EMLDINIMDDKSFSDRLSTSISGSDAMLGSSDSNIYGMVDPRADELLDDSGATDVSPLSR 576

Query: 1875 SSVPCTEGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQRKQLA 2054
            S+VPC + I LL EQAVE G ALVLD  +LDAD +++ +V FAK+AP GPVF   RK + 
Sbjct: 577  SAVPCMKEISLLLEQAVEQGSALVLDKDSLDADNIYQTTVSFAKSAPLGPVFMKHRK-VV 635

Query: 2055 VQKNKEQERDDNSGSKEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKADYLNVVPQGN 2234
            VQK  +QE   +  S ++EA      E T    + +R+ S   + ++    + NVVPQG 
Sbjct: 636  VQKRVKQEAPTSEISDKQEARTLKTRETTAVTTKGKRENSPIRRRENFDERFQNVVPQGT 695

Query: 2235 LRIDELAKLL 2264
            L +DELAKLL
Sbjct: 696  LGVDELAKLL 705


>ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]
            gi|355524767|gb|AET05221.1| CRS2-associated factor
            [Medicago truncatula]
          Length = 698

 Score =  591 bits (1524), Expect = e-166
 Identities = 340/671 (50%), Positives = 420/671 (62%), Gaps = 53/671 (7%)
 Frame = +3

Query: 411  HPA--FKPLPRPRKIPVNENETEKSSGLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKP 584
            HPA  F  +P+ +  PVN+         N +I E+GVSY I  APF ++YSYTETPK KP
Sbjct: 41   HPALKFSNIPKQKLKPVNKTPE------NVKISEDGVSYVIEGAPFEFKYSYTETPKSKP 94

Query: 585  VKLREPLVSPFGPGTMAKPWLGRXXXXXXXXXXXEFDSFQLPPPHKKGVKPVQAPGPFLP 764
            V++REP   PFGP TM +PW GR           EFDSF LPPPHKKGVKPVQ+PGPFLP
Sbjct: 95   VQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKGVKPVQSPGPFLP 154

Query: 765  GSGPKYVRSREEVLGTPLTKEEIEELIKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRR 944
            G+ P+YV SREEVLG PLTKEEI EL++ + KS+RQLN+GRDG  HNMLDNIHA WKRRR
Sbjct: 155  GTSPRYVMSREEVLGEPLTKEEINELVRSTLKSSRQLNLGRDGFIHNMLDNIHAHWKRRR 214

Query: 945  VCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKP 1124
            VCKIKC GVCTVDMDNVCQQLEEKTGGK+IY RGGVIYLFRGRNYN+K+RPRFPLMLWKP
Sbjct: 215  VCKIKCIGVCTVDMDNVCQQLEEKTGGKVIYRRGGVIYLFRGRNYNHKTRPRFPLMLWKP 274

Query: 1125 VTPVYPRLIQRVPEGLTLEEANDMRKRGSYLTPICKLAKNGVYCDLVKNVREAFEACELV 1304
            V PVYPRLIQ+VPEGLTLEEA +MR++G  LTPICKL KNGVY +LV NVREAFE CELV
Sbjct: 275  VPPVYPRLIQQVPEGLTLEEATEMRQKGRTLTPICKLGKNGVYYNLVNNVREAFEECELV 334

Query: 1305 RINCQGLNPSDYKKIGAKLKDLVPCVLLSFECEHILVWRGRDWQSLLEPD------ESLK 1466
            R+NCQGLN SDY+KIGAKL+DLVPC LLS+E EHIL+WRGR+W+S   PD      E+ K
Sbjct: 335  RVNCQGLNKSDYRKIGAKLRDLVPCTLLSYENEHILMWRGRNWKSSF-PDLVEDFKEATK 393

Query: 1467 GLQEVKDDDVAXXXXXXXXXXXXXXCIMEDKPN---DLEISL-----------SPTYSNE 1604
               + K+D                   +E   N   D  IS             PT +++
Sbjct: 394  ADADNKNDKTLQSEALDVSTPSLNHNPVEHVSNLSHDTSISFCPDDVTVDKVPCPTKNSK 453

Query: 1605 ESQ---GNSELTEV-EAEDIAKVPDA---PVIAS-------------HAVLNGDGIIDES 1724
            +S     ++ LT+V EAE      D+   P   S             H     + I D  
Sbjct: 454  QSMSVVADASLTKVYEAETTNVATDSYGEPESCSNTSPGMTISHDSRHTECPSNAISDSH 513

Query: 1725 EKSPVFPGSFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNLS--------- 1877
              S +     +GD     + ++     +  +  +        +ADE +N S         
Sbjct: 514  GTSDIMDDKGFGD---CLSTSISGSNAMLGSRNSNIYGTVDPHADELLNDSGAADVSPLP 570

Query: 1878 --SVPCTEGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQRKQL 2051
              + P  +GI LL EQAVE G ALVLD  +LDAD V++ +V FA++AP GPVF   RK +
Sbjct: 571  RAAAPFMKGISLLLEQAVEQGNALVLDKDSLDADNVYRTTVSFAQSAPPGPVFMKHRK-V 629

Query: 2052 AVQKNKEQERDDNSGSKEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKADYLNVVPQG 2231
            AVQK+ +QE      ++E       GT V   G+R   ++ R  + ++    ++N+VPQG
Sbjct: 630  AVQKSDKQEA-LTPETRETTTVTTKGTTVATKGKR--ERSPRIRRKENFDERFMNLVPQG 686

Query: 2232 NLRIDELAKLL 2264
             L +DELAKLL
Sbjct: 687  TLGVDELAKLL 697


>ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Citrus
            sinensis]
          Length = 837

 Score =  575 bits (1482), Expect = e-161
 Identities = 308/625 (49%), Positives = 389/625 (62%), Gaps = 18/625 (2%)
 Frame = +3

Query: 141  HRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPTTF 320
            HR  TEIRFSRWNNANA++F +  R Q+E+ED IR  +RFDSA  I  +Y+ +    T  
Sbjct: 29   HRPATEIRFSRWNNANAEEFNQRRRAQQEIEDDIRRHRRFDSATKITQSYDSSTSTATN- 87

Query: 321  XXXXXXXXXXXXXXXXXXXXXXXTPSRKTL-----------HPAFKPLPRPRKIPVNENE 467
                                    P RK+            HPAF+ + +  K      E
Sbjct: 88   ------GVAFKSAGTPSSPSRPSIPGRKSKYSKPATNSSVDHPAFRKISKREKTTNKSPE 141

Query: 468  TEKSSGLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWL 647
               +S  N  I E+G+SY I  APF ++YSYTE PK KP+KLRE   SPFGP TM +PW 
Sbjct: 142  KPAASKSNISITEDGLSYVIDGAPFEFKYSYTEAPKAKPLKLREAAFSPFGPTTMGRPWT 201

Query: 648  GRXXXXXXXXXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKE 827
            GR           EFDSFQLPPP+KKGVKPVQ PGP+LPG+GP+YV +REE+LG PLT E
Sbjct: 202  GRAPLPPSKKKLKEFDSFQLPPPNKKGVKPVQKPGPYLPGTGPRYVSTREEILGEPLTAE 261

Query: 828  EIEELIKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQL 1007
            E+ EL++  K+S+RQLNMGRDGLTHNMLDNIHA WKRRR CKIKCKGVCTVDMDNVC+QL
Sbjct: 262  EVRELVESVKRSSRQLNMGRDGLTHNMLDNIHAHWKRRRACKIKCKGVCTVDMDNVCEQL 321

Query: 1008 EEKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEA 1187
            EE+TGGKIIY RGGV+YLFRGRNYNY++RP FPLMLWKP+TPVYPRLIQ+VP+GLTLEEA
Sbjct: 322  EERTGGKIIYRRGGVLYLFRGRNYNYRNRPHFPLMLWKPITPVYPRLIQQVPDGLTLEEA 381

Query: 1188 NDMRKRGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKD 1367
             +MRK+G  L PICKL KNGVYCDL KNVREAFE CELVRINCQG+N SDY+KIGAKL+D
Sbjct: 382  TEMRKKGRKLIPICKLGKNGVYCDLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRD 441

Query: 1368 LVPCVLLSFECEHILVWRGRDWQ-SLLEPDESLKGLQEVKDD---DVAXXXXXXXXXXXX 1535
            LVPCVL+SFE EHIL+WRG++W+ S+L+P    +  +E K D    VA            
Sbjct: 442  LVPCVLISFEREHILMWRGQEWKSSILKPGNDSEDAKESKVDGSISVAPPTAGNGSAPSH 501

Query: 1536 XXCIMED--KPNDLEISLSPT-YSNEESQGNSELTEVEAEDIAKVPDAPVIASHAVLNGD 1706
               ++ +    N    S+SP  Y   +S     L+ ++ E+   V        +  L+ D
Sbjct: 502  TQMLLVEGGSLNTFNSSISPKGYEEVQSALRENLSSIDGEEPFSVTKLSFADDNEQLSAD 561

Query: 1707 GIIDESEKSPVFPGSFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNLSSVP 1886
              +  ++    F  S     ++     + +D+T    E   T+     + D+   + ++ 
Sbjct: 562  ESLSLADDDEPFSDSENLSSADDDEPFLASDSTTNVMEINETISATGCSNDKSDAMKNI- 620

Query: 1887 CTEGILLLREQAVENGMALVLDDHN 1961
              E +  L    V N  +  + D N
Sbjct: 621  -FENVSKLENSGVGNDTSEPVSDTN 644



 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 130/522 (24%), Positives = 230/522 (44%), Gaps = 24/522 (4%)
 Frame = +3

Query: 774  PKYVRSREEVLGTPLTKEEIEELIKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCK 953
            P Y R  ++V    LT EE  E+ K  +K      +G++G+  ++  N+   ++   + +
Sbjct: 363  PVYPRLIQQV-PDGLTLEEATEMRKKGRKLIPICKLGKNGVYCDLAKNVREAFEVCELVR 421

Query: 954  IKCKGVCTVDMDNVCQQLEEKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTP 1133
            I C+G+   D   +  +L +     +I      I ++RG+ +           + KP   
Sbjct: 422  INCQGMNGSDYRKIGAKLRDLVPCVLISFEREHILMWRGQEWKSS--------ILKP--- 470

Query: 1134 VYPRLIQRVPEGLTLEEANDMRKRGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRIN 1313
                       G   E+A + +  GS ++     A NG      + +    E   L   N
Sbjct: 471  -----------GNDSEDAKESKVDGS-ISVAPPTAGNGSAPSHTQML--LVEGGSLNTFN 516

Query: 1314 CQGLNPSDYKKIGAKLKDLVPCVLLSFECEHILVWRGRDWQSLLEPDESLKGLQEVKDDD 1493
               ++P  Y+++ + L++ +  +    E   +      D    L  DESL    +  D+ 
Sbjct: 517  -SSISPKGYEEVQSALRENLSSID-GEEPFSVTKLSFADDNEQLSADESLSLADD--DEP 572

Query: 1494 VAXXXXXXXXXXXXXXCIMEDKPNDLEIS--LSPT-YSNEESQGNSELTEVEAEDIAKVP 1664
             +                 +   N +EI+  +S T  SN++S     + E    +++K+ 
Sbjct: 573  FSDSENLSSADDDEPFLASDSTTNVMEINETISATGCSNDKSDAMKNIFE----NVSKLE 628

Query: 1665 DAPVIASHAVLNGDGIIDESEKSPVFP--GSFYGDPSEAFNQTVGNDATLENTERAATVL 1838
            ++ V         + + D +E   V    GS  G+ +     +VG++ TL + E      
Sbjct: 629  NSGVGND----TSEPVSDTNECQTVLDNKGSVLGESAAL---SVGSETTLGSAESTRDQS 681

Query: 1839 NY----TKNADEEMNLSSVP------------CTEGILLLREQAVENGMALVLDDHNLDA 1970
             +    + N D + N S VP              E +L L  QAVENG A+VLDD  LDA
Sbjct: 682  EHFYVGSLNHDYQQNPSEVPEDHNVLTRLHGPSLEIVLHLMRQAVENGSAVVLDDATLDA 741

Query: 1971 DTVFKKSVDFAKTAPTGPVFSLQRKQLAVQKNKEQERDDNSGSKEKEAGAALGTEVTVPG 2150
            D+++++SV FAK+AP GPVF  + +++A+QK +++E       +E      +   V    
Sbjct: 742  DSIYERSVAFAKSAPPGPVFQQRSRKIAIQKGEKKEAGHLKMKRE------VPNMVVSEN 795

Query: 2151 RRNERKTSRNEKLKDIKADY-LNVV--PQGNLRIDELAKLLA 2267
            R N R+++R +     + ++ L+VV  PQG+L+IDELAKLLA
Sbjct: 796  RGNVRQSNRKKTKNSDEIEHGLDVVLSPQGSLKIDELAKLLA 837


>ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, partial [Citrus clementina]
            gi|557554477|gb|ESR64491.1| hypothetical protein
            CICLE_v100106541mg, partial [Citrus clementina]
          Length = 825

 Score =  575 bits (1482), Expect = e-161
 Identities = 308/625 (49%), Positives = 389/625 (62%), Gaps = 18/625 (2%)
 Frame = +3

Query: 141  HRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPTTF 320
            HR  TEIRFSRWNNANA++F +  R Q+E+ED IR  +RFDSA  I  +Y+ +    T  
Sbjct: 35   HRPATEIRFSRWNNANAEEFNQRRRAQQEIEDDIRRHRRFDSATKITQSYDSSTSTATN- 93

Query: 321  XXXXXXXXXXXXXXXXXXXXXXXTPSRKTL-----------HPAFKPLPRPRKIPVNENE 467
                                    P RK+            HPAF+ + +  K      E
Sbjct: 94   ------GVAFKSAGTPSSPSRPSIPGRKSKYSKPATNSSVDHPAFRKISKREKTTNKSPE 147

Query: 468  TEKSSGLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWL 647
               +S  N  I E+G+SY I  APF ++YSYTE PK KP+KLRE   SPFGP TM +PW 
Sbjct: 148  KPAASKSNISITEDGLSYVIDGAPFEFKYSYTEAPKAKPLKLREAAFSPFGPTTMGRPWT 207

Query: 648  GRXXXXXXXXXXXEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKE 827
            GR           EFDSFQLPPP+KKGVKPVQ PGP+LPG+GP+YV +REE+LG PLT E
Sbjct: 208  GRAPLPPSKKKLKEFDSFQLPPPNKKGVKPVQKPGPYLPGTGPRYVSTREEILGEPLTAE 267

Query: 828  EIEELIKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQL 1007
            E+ EL++  K+S+RQLNMGRDGLTHNMLDNIHA WKRRR CKIKCKGVCTVDMDNVC+QL
Sbjct: 268  EVRELVESVKRSSRQLNMGRDGLTHNMLDNIHAHWKRRRACKIKCKGVCTVDMDNVCEQL 327

Query: 1008 EEKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEA 1187
            EE+TGGKIIY RGGV+YLFRGRNYNY++RP FPLMLWKP+TPVYPRLIQ+VP+GLTLEEA
Sbjct: 328  EERTGGKIIYRRGGVLYLFRGRNYNYRNRPHFPLMLWKPITPVYPRLIQQVPDGLTLEEA 387

Query: 1188 NDMRKRGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKD 1367
             +MRK+G  L PICKL KNGVYCDL KNVREAFE CELVRINCQG+N SDY+KIGAKL+D
Sbjct: 388  TEMRKKGRKLIPICKLGKNGVYCDLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRD 447

Query: 1368 LVPCVLLSFECEHILVWRGRDWQ-SLLEPDESLKGLQEVKDD---DVAXXXXXXXXXXXX 1535
            LVPCVL+SFE EHIL+WRG++W+ S+L+P    +  +E K D    VA            
Sbjct: 448  LVPCVLISFEREHILMWRGQEWKSSILKPGNDSEDAKESKVDGSISVAPPTAGNGSAPSH 507

Query: 1536 XXCIMED--KPNDLEISLSPT-YSNEESQGNSELTEVEAEDIAKVPDAPVIASHAVLNGD 1706
               ++ +    N    S+SP  Y   +S     L+ ++ E+   V        +  L+ D
Sbjct: 508  TQMLLVEGGSLNTFNSSISPKGYEEVQSALRENLSSIDGEEPFSVTKLSFADDNEQLSAD 567

Query: 1707 GIIDESEKSPVFPGSFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNLSSVP 1886
              +  ++    F  S     ++     + +D+T    E   T+     + D+   + ++ 
Sbjct: 568  ESLSLADDDEPFSDSENLSSADDDEPFLASDSTTNVMEINETISATGCSNDKSDAMKNI- 626

Query: 1887 CTEGILLLREQAVENGMALVLDDHN 1961
              E +  L    V N  +  + D N
Sbjct: 627  -FENVSKLENSGVGNDTSEPVSDTN 650



 Score = 77.8 bits (190), Expect = 2e-11
 Identities = 108/456 (23%), Positives = 196/456 (42%), Gaps = 21/456 (4%)
 Frame = +3

Query: 774  PKYVRSREEVLGTPLTKEEIEELIKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCK 953
            P Y R  ++V    LT EE  E+ K  +K      +G++G+  ++  N+   ++   + +
Sbjct: 369  PVYPRLIQQV-PDGLTLEEATEMRKKGRKLIPICKLGKNGVYCDLAKNVREAFEVCELVR 427

Query: 954  IKCKGVCTVDMDNVCQQLEEKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTP 1133
            I C+G+   D   +  +L +     +I      I ++RG+ +           + KP   
Sbjct: 428  INCQGMNGSDYRKIGAKLRDLVPCVLISFEREHILMWRGQEWKSS--------ILKP--- 476

Query: 1134 VYPRLIQRVPEGLTLEEANDMRKRGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRIN 1313
                       G   E+A + +  GS ++     A NG      + +    E   L   N
Sbjct: 477  -----------GNDSEDAKESKVDGS-ISVAPPTAGNGSAPSHTQML--LVEGGSLNTFN 522

Query: 1314 CQGLNPSDYKKIGAKLKDLVPCVLLSFECEHILVWRGRDWQSLLEPDESLKGLQEVKDDD 1493
               ++P  Y+++ + L++ +  +    E   +      D    L  DESL    +  D+ 
Sbjct: 523  -SSISPKGYEEVQSALRENLSSID-GEEPFSVTKLSFADDNEQLSADESLSLADD--DEP 578

Query: 1494 VAXXXXXXXXXXXXXXCIMEDKPNDLEIS--LSPT-YSNEESQGNSELTEVEAEDIAKVP 1664
             +                 +   N +EI+  +S T  SN++S     + E    +++K+ 
Sbjct: 579  FSDSENLSSADDDEPFLASDSTTNVMEINETISATGCSNDKSDAMKNIFE----NVSKLE 634

Query: 1665 DAPVIASHAVLNGDGIIDESEKSPVFP--GSFYGDPSEAFNQTVGNDATLENTERAATVL 1838
            ++ V         + + D +E   V    GS  G+ +     +VG++ TL + E      
Sbjct: 635  NSGVGND----TSEPVSDTNECQTVLDNKGSVLGESAAL---SVGSETTLGSAESTRDQS 687

Query: 1839 NY----TKNADEEMNLSSVP------------CTEGILLLREQAVENGMALVLDDHNLDA 1970
             +    + N D + N S VP              E +L L  QAVENG A+VLDD  LDA
Sbjct: 688  EHFYVGSLNHDYQQNPSEVPEDHNVLTRLHGPSLEIVLHLMRQAVENGSAVVLDDATLDA 747

Query: 1971 DTVFKKSVDFAKTAPTGPVFSLQRKQLAVQKNKEQE 2078
            D+++++SV FAK+AP GPVF  + +++A+QK +++E
Sbjct: 748  DSIYERSVAFAKSAPPGPVFQQRSRKIAIQKGEKKE 783