BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00001560
         (566 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]   204   1e-50
emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]   197   1e-48
emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera]   189   5e-46
gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposo...   184   1e-44
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]   181   9e-44
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...   181   1e-43
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   181   1e-43
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]          181   1e-43
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...   177   1e-42
gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsi...   175   6e-42
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi...   175   8e-42
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]         174   1e-41
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi...   174   1e-41
emb|CAA20201.1| putative transposable element [Arabidopsis thali...   172   4e-41
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t...   172   7e-41
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...   171   9e-41
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...   171   9e-41
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        170   3e-40
emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]   170   3e-40
emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]                169   3e-40

>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
          Length = 777

 Score =  204 bits (519), Expect = 1e-50
 Identities = 100/169 (59%), Positives = 124/169 (73%)
 Frame = -2

Query: 565  YLKHSVNVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHI 386
            Y++ S+ VGLKF  S EG  + GYVDS+Y  D D R STT Y+FTL G  VSWKSQLQ I
Sbjct: 599  YVRGSLGVGLKFGSSKEGDGITGYVDSDYVGDLDKRXSTTGYIFTLFGGPVSWKSQLQSI 658

Query: 385  VALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTK 206
            VALSTT++EY+A TEA+KEA+WL+GL+ E+  L   V +F DSQS IQLC NP FH RTK
Sbjct: 659  VALSTTKAEYIAATEAMKEALWLQGLVKELXVLNSVVEIFLDSQSAIQLCNNPXFHXRTK 718

Query: 205  HIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 59
            HIDVR+H+IR+ ++ G + LEKI    NPADM TK LPV+KF   L ++
Sbjct: 719  HIDVRYHFIRETISSGAMKLEKISXVDNPADMATKVLPVTKFKYSLDLV 767


>emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]
          Length = 1842

 Score =  197 bits (502), Expect = 1e-48
 Identities = 97/169 (57%), Positives = 124/169 (73%)
 Frame = -2

Query: 565  YLKHSVNVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHI 386
            Y++ S+ VGLKF  S EG  + GYVD +YA D D R+STTSY+FTL G  V+WKSQLQ I
Sbjct: 1674 YVRGSLGVGLKFGVSKEGASIIGYVDLDYAGDLDKRRSTTSYIFTLFGGPVNWKSQLQSI 1733

Query: 385  VALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTK 206
            VALST E EY+  T+A+KE +WL+GL+ E+G L   V +FSDSQS IQLCKN VFH+RTK
Sbjct: 1734 VALSTXEVEYITTTKAMKETLWLQGLVKELGVLNSVVEIFSDSQSTIQLCKNXVFHERTK 1793

Query: 205  HIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 59
            H++VR+H+IR++V+   + LEKI    NP DM TK LPV KF   L ++
Sbjct: 1794 HVNVRYHFIREIVSSRKMKLEKISLADNPIDMATKVLPVRKFXYYLDLV 1842



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/65 (41%), Positives = 42/65 (64%)
 Frame = -2

Query: 274  VVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCL 95
            V +SDSQ+ I   K+P +H+RTKHID + ++IRD++A+  V L+ +P+    AD  TK +
Sbjct: 1160 VFYSDSQATIAYVKDPKYHERTKHIDTKNNFIRDIIARNEVILKYLPTXEMVADPFTKSI 1219

Query: 94   PVSKF 80
                F
Sbjct: 1220 SRDMF 1224


>emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera]
          Length = 421

 Score =  189 bits (479), Expect = 5e-46
 Identities = 100/164 (60%), Positives = 121/164 (73%), Gaps = 8/164 (4%)
 Frame = -2

Query: 547 NVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTT 368
           N GLKF  S EGV + GYVDS+YA D D R+ST  Y+FTL G  VSWKSQLQ IVALSTT
Sbjct: 256 NPGLKFRYSKEGVGIIGYVDSDYARDLDKRRSTIGYIFTLFGGPVSWKSQLQLIVALSTT 315

Query: 367 ESEYVAVTEA--------LKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDR 212
           E++Y+AVTEA        +KEAI L+GL+ E+G L   V +F +SQS IQLCKN VFH+R
Sbjct: 316 EAKYIAVTEAKYIIATEAMKEAILLQGLVKELGVLNSVVEIFLNSQSAIQLCKNLVFHER 375

Query: 211 TKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKF 80
           TKH+DVR+H+IR++V+ G V LEKI +  N ADM TK L VSKF
Sbjct: 376 TKHVDVRYHFIREIVSLGAVKLEKISTTDNSADMATKVLLVSKF 419


>gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis]
          Length = 1822

 Score =  184 bits (467), Expect = 1e-44
 Identities = 86/156 (55%), Positives = 123/156 (78%), Gaps = 1/156 (0%)
 Frame = -2

Query: 565 YLKHSVNVGLKFTKSA-EGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 389
           +++ + NVGL + +   +G KL+GYVD+++A D D R+S + Y+FTL G  VSWK+QLQ 
Sbjct: 506 WVQGASNVGLLYKRMRNDGEKLRGYVDADFAGDLDKRRSLSGYIFTLFGCTVSWKAQLQL 565

Query: 388 IVALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRT 209
           +VALSTTE+EY+A TE +KEA+WLKGLI E+G ++ +V VF D+QS I L KN +F+DRT
Sbjct: 566 VVALSTTEAEYIAATEGVKEAMWLKGLIGELGIVQDEVEVFCDNQSSILLTKNQMFYDRT 625

Query: 208 KHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTK 101
           KHID++ H+IRD++++G V LEKI ++ NPADMGT+
Sbjct: 626 KHIDIKLHFIRDIISRGTVTLEKIHTDDNPADMGTR 661


>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
          Length = 735

 Score =  181 bits (460), Expect = 9e-44
 Identities = 86/171 (50%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
 Frame = -2

Query: 565  YLKHSVNVGLKFTKSAE-GVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 389
            YL  + ++GL +  +++ G +L+G+VD++Y  + D RKS   YVFT+ G  VSWK+ LQ 
Sbjct: 561  YLAGTRSLGLVYGGNSQLGTQLQGFVDADYPGNIDTRKSLIGYVFTVFGGAVSWKANLQS 620

Query: 388  IVALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRT 209
            +VALS TE+EY+A+TE +KE IWLKG+I E+   KG VVV+ D+QS I L KN  FH+R+
Sbjct: 621  VVALSATEAEYMAMTEVVKEVIWLKGIIEELAMYKGKVVVYCDNQSAIHLAKNQSFHERS 680

Query: 208  KHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKILN 56
            KHIDVR H++RD++A G + + K+P++ NP+DM TK L V+KF  CL ++N
Sbjct: 681  KHIDVRLHFVRDIIAVGEIGVGKVPTKDNPSDMLTKSLNVTKFKHCLNLIN 731


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  181 bits (458), Expect = 1e-43
 Identities = 91/169 (53%), Positives = 122/169 (72%)
 Frame = -2

Query: 565  YLKHSVNVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHI 386
            YLK + ++ L FTK  +   + GY DSNYA D D R+S + YVFT+ G+ VSWK+ LQ +
Sbjct: 1183 YLKGAQDLNLVFTKEKD-FTVTGYCDSNYAADLDRRRSISGYVFTIGGNTVSWKASLQPV 1241

Query: 385  VALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTK 206
            VA+STTE+EY+A+ EA KEA+W+KGL+ ++G  +  V ++ DSQS I L KN V+H+RTK
Sbjct: 1242 VAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQDKVKIWCDSQSAICLSKNSVYHERTK 1301

Query: 205  HIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 59
            HIDVRF+YIRDVV  G V + KI +  NP D  TKC+PV+KF S L +L
Sbjct: 1302 HIDVRFNYIRDVVESGDVDVLKIHTSRNPVDALTKCIPVNKFKSALGVL 1350


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  181 bits (458), Expect = 1e-43
 Identities = 87/171 (50%), Positives = 126/171 (73%), Gaps = 1/171 (0%)
 Frame = -2

Query: 565  YLKHSVNVGLKFTKSAE-GVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 389
            YL  + ++GL +  +++   +L+G+VD++YA + D RKS T YVFT  G  VSWK+ LQ 
Sbjct: 1034 YLAGTRSLGLVYGGNSQLETQLQGFVDADYAGNIDTRKSLTGYVFTXFGGAVSWKANLQS 1093

Query: 388  IVALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRT 209
            +VALSTTE+EY+A+TEA+KEAIWLKG+  E+   +G VVV+ D+QS I L KN  FH+R+
Sbjct: 1094 VVALSTTEAEYMAMTEAVKEAIWLKGITEELAMYRGKVVVYCDNQSAIHLAKNQSFHERS 1153

Query: 208  KHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKILN 56
            KHIDVR H++RD++A G + + K+ ++ NP+DM TK L V+KF  CL ++N
Sbjct: 1154 KHIDVRLHFVRDIIAAGEIGVGKVHTKDNPSDMLTKSLNVTKFKHCLNLIN 1204


>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score =  181 bits (458), Expect = 1e-43
 Identities = 88/169 (52%), Positives = 124/169 (73%)
 Frame = -2

Query: 565 YLKHSVNVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHI 386
           YL  +V+VGL F K+  G +  GY DS++A D D ++ST+ YVFTL G  VSW+S LQ  
Sbjct: 124 YLYGTVDVGLLFKKNC-GQQCVGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQST 182

Query: 385 VALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTK 206
           +ALSTTE+EY+A TEA+KEAIWLKGL+ ++G ++ ++ VF D+QS I L KN  +H RTK
Sbjct: 183 IALSTTEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQTYHARTK 242

Query: 205 HIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 59
           HIDV++HY+R+++  G V L+KI ++ NP+DM TK +   KF  CLK++
Sbjct: 243 HIDVKYHYVREIIEGGDVLLKKIDTKDNPSDMLTKVVSEVKFQHCLKLI 291


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score =  177 bits (450), Expect = 1e-42
 Identities = 89/169 (52%), Positives = 123/169 (72%)
 Frame = -2

Query: 565  YLKHSVNVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHI 386
            Y+K + +  L+F K  +  +++GY DS+YA D D R+S T +VFT  G+ +SWKS LQ +
Sbjct: 1170 YMKGTQDTCLRFKKD-DKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTISWKSGLQRV 1228

Query: 385  VALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTK 206
            VALSTTE+EY+A+ EA+KEAIWL+GL +E+GF +  V V  DSQS I L KN V H+RTK
Sbjct: 1229 VALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSVHHERTK 1288

Query: 205  HIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 59
            HIDVR+H+IR+ +A G + + KI + +NPAD+ TK +PVSK    LK+L
Sbjct: 1289 HIDVRYHFIREKIADGEIQVVKISTTWNPADIFTKTVPVSKLQEALKLL 1337


>gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 838

 Score =  175 bits (444), Expect = 6e-42
 Identities = 89/169 (52%), Positives = 122/169 (72%)
 Frame = -2

Query: 565  YLKHSVNVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHI 386
            Y+K S++  L++ +  + V + GY DS+++ DRD  +STT Y FT+ G+ VSW+S LQ +
Sbjct: 666  YIKGSIDSRLQYKREGDFV-VTGYCDSDHSGDRDRSRSTTGYTFTVGGNIVSWRSCLQPV 724

Query: 385  VALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTK 206
            VALS+TE+EY+A+TEA KEA WLK L++E+GF +G V +  DSQS I L KN V H+RTK
Sbjct: 725  VALSSTEAEYIALTEAAKEAYWLKDLMNELGFKQGAVDIHCDSQSAIALAKNAVHHERTK 784

Query: 205  HIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 59
            HI  RFHYIRD +  G V + KI +  NP+D+ TK +PV+KFLS LK L
Sbjct: 785  HIQRRFHYIRDAITDGEVKVLKISTVHNPSDIFTKVVPVNKFLSALKKL 833


>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  175 bits (443), Expect = 8e-42
 Identities = 87/169 (51%), Positives = 124/169 (73%)
 Frame = -2

Query: 565  YLKHSVNVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHI 386
            Y+K S+   L++ +S++  K+ GY D+++A  +D R+S T  VFTL GS +SWKS  Q +
Sbjct: 1161 YIKGSLGTKLQYKRSSD-FKVVGYCDADHAACKDRRRSITGLVFTLGGSTISWKSGQQRV 1219

Query: 385  VALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTK 206
            VALSTTE+EY+++TEA+KEA+W+KGL+ E G+ +  V +F DSQS I L KN V H+RTK
Sbjct: 1220 VALSTTEAEYMSLTEAVKEAVWMKGLLKEFGYEQKSVEIFCDSQSAIALSKNNVHHERTK 1279

Query: 205  HIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 59
            HIDVR+ YIRD++A G   + KI +E NPAD+ TK +PV+KF + L +L
Sbjct: 1280 HIDVRYQYIRDIIANGDGDVVKIDTEKNPADIFTKIVPVNKFQAALTLL 1328


>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1363

 Score =  174 bits (442), Expect = 1e-41
 Identities = 87/169 (51%), Positives = 124/169 (73%)
 Frame = -2

Query: 565  YLKHSVNVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHI 386
            Y+K +V+  L + ++++   + GY D++YA D D R+S T  VFTL G+ +SWKS LQ +
Sbjct: 1191 YIKGTVDTRLCYKRNSD-FSICGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRV 1249

Query: 385  VALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTK 206
            VA S+TE EY+++TEA+KEAIWLKGL+ + G+ + +V +F DSQS I L KN V H+RTK
Sbjct: 1250 VAQSSTECEYMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHERTK 1309

Query: 205  HIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 59
            HIDV+FH+IR+++A G V + KI +E NPAD+ TK LPV+KF + L  L
Sbjct: 1310 HIDVKFHFIREIIADGKVEVSKISTEKNPADIFTKVLPVNKFQTALDFL 1358


>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  174 bits (442), Expect = 1e-41
 Identities = 88/169 (52%), Positives = 122/169 (72%)
 Frame = -2

Query: 565  YLKHSVNVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHI 386
            Y+K ++   L + KS+    + GY D++YA D D R+S T  VFTL G+ +SWKS LQ +
Sbjct: 1184 YIKGTLKTRLCYKKSSS-FSIVGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRV 1242

Query: 385  VALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTK 206
            VA STTESEY+++TEA+KEAIWLKGL+ + G+ +  V +F DSQS I L KN V H+RTK
Sbjct: 1243 VAQSTTESEYMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERTK 1302

Query: 205  HIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 59
            HIDV++H+IR++++ G V + KI +E NPAD+ TK L VSKF + L +L
Sbjct: 1303 HIDVKYHFIREIISDGTVEVLKISTEKNPADIFTKVLAVSKFQAALNLL 1351


>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
            gi|7268932|emb|CAB79135.1| putative transposable element
            [Arabidopsis thaliana]
          Length = 1308

 Score =  172 bits (437), Expect = 4e-41
 Identities = 79/157 (50%), Positives = 116/157 (73%)
 Frame = -2

Query: 529  TKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYVA 350
            ++    ++++GY DS++A D D R+S + YVFT+ G+ VSWKS LQH+VALS+T++E++A
Sbjct: 1148 SRPGANLEVQGYCDSDHAADLDKRRSISGYVFTVGGNTVSWKSSLQHVVALSSTQAEFIA 1207

Query: 349  VTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDV 170
            +TEA+KEAIW++GL+ ++G       V+ DSQS I L KN  FHDRTKH++V+F++IRD+
Sbjct: 1208 LTEAVKEAIWIRGLLEDMGLQPKPATVWCDSQSAICLSKNNAFHDRTKHVEVKFYFIRDI 1267

Query: 169  VAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 59
            +  G V + KI +  NPADM TKC+PV KF   L +L
Sbjct: 1268 IEAGEVKVRKIHTSVNPADMLTKCIPVKKFEEALDVL 1304


>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
           retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
           reverse transcriptase [Arabidopsis thaliana]
          Length = 587

 Score =  172 bits (435), Expect = 7e-41
 Identities = 87/169 (51%), Positives = 122/169 (72%)
 Frame = -2

Query: 565 YLKHSVNVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHI 386
           Y++ S ++ L FTK  E  ++ GY DS+YA D D R+S + YVFT+ G+ VSWK+ LQ +
Sbjct: 414 YMRGSQDLNLVFTKEKE-FRVTGYCDSDYAADLDRRRSVSGYVFTVGGNTVSWKANLQSV 472

Query: 385 VALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTK 206
            ALSTTE+E++A+TEA KEA+W+KGL+ ++G  +  V ++ DSQS I L KN   H+RTK
Sbjct: 473 TALSTTEAEFMALTEAAKEALWIKGLMKDLGLEQDKVTLWCDSQSAICLSKNSTHHERTK 532

Query: 205 HIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 59
           HIDVR+++IRDVV  G V + KI +  NPAD  TK +PV+KF S L++L
Sbjct: 533 HIDVRYNFIRDVVEAGDVDVLKIHTSRNPADALTKSIPVNKFQSALELL 581


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1175

 Score =  171 bits (434), Expect = 9e-41
 Identities = 85/169 (50%), Positives = 122/169 (72%)
 Frame = -2

Query: 565  YLKHSVNVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHI 386
            YL+ + N  LKF ++ +G  L GYVDS++A D D R+S T YVFT+    VSWK+ L+H+
Sbjct: 1005 YLRDTANACLKFGRTNKG--LIGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLRHV 1062

Query: 385  VALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTK 206
            VA STTE+EY+A+ EA KE++WLKGL +E+  +   + +F DSQS I L K+ +FH+RTK
Sbjct: 1063 VAQSTTEAEYMAIAEACKESVWLKGLFAELCGVYSCINLFCDSQSAICLTKDQMFHERTK 1122

Query: 205  HIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 59
            HID+++HY+RDVVA+G + + KI +  NP DM TK +PV+KF  C  ++
Sbjct: 1123 HIDIKYHYVRDVVAQGKLKVCKISTHDNPVDMMTKHVPVAKFELCSSLV 1171


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score =  171 bits (434), Expect = 9e-41
 Identities = 84/169 (49%), Positives = 122/169 (72%)
 Frame = -2

Query: 565  YLKHSVNVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHI 386
            Y++ +    L F K  E   L+GY DS+Y ++ D R+S T YVFT+ G+ +SWKS+LQ +
Sbjct: 1163 YMRGTEKKKLCFRKQ-EDFLLRGYCDSDYGSNFDTRRSITGYVFTVGGNTISWKSKLQKV 1221

Query: 385  VALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTK 206
            VA+S+TE+EY+A+TEA+KEA+WLKG  +E+G  +  V V SDSQS I L KN V H+RTK
Sbjct: 1222 VAISSTEAEYMALTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSAITLAKNSVHHERTK 1281

Query: 205  HIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 59
            HID+R H+IRD++  G++ + KI +E NPA++ TK +P++KF   L +L
Sbjct: 1282 HIDIRLHFIRDIICAGLIKVVKIATECNPANIFTKTVPLAKFEGALNML 1330


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  170 bits (430), Expect = 3e-40
 Identities = 88/169 (52%), Positives = 121/169 (71%)
 Frame = -2

Query: 565  YLKHSVNVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHI 386
            YL  + +  L+F +S +G  L GYVDS++A D D R+S T YVFT+ G  VSWK+ LQ  
Sbjct: 1011 YLHGTSSACLQFGRSRDG--LVGYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQAT 1068

Query: 385  VALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTK 206
            VALSTTE+EY+A++EA KEAIWL+GL +E+  +   + +F DSQS I L K+ +FH+RTK
Sbjct: 1069 VALSTTEAEYMAISEACKEAIWLRGLYTELCGVTSCINIFCDSQSAICLTKDQMFHERTK 1128

Query: 205  HIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 59
            HIDVR+H+IR V+A+G V + KI +  NPADM TK +P +KF  C  ++
Sbjct: 1129 HIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVPATKFELCSSLV 1177


>emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]
          Length = 406

 Score =  170 bits (430), Expect = 3e-40
 Identities = 82/168 (48%), Positives = 115/168 (68%)
 Frame = -2

Query: 565 YLKHSVNVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHI 386
           YL+ + + G+ F+K      +KGYVD++YA D D R+ST  YVFTL G  + WKS +Q +
Sbjct: 238 YLRGTTDYGITFSKQQSDPSVKGYVDADYAGDLDERRSTIGYVFTLGGGPICWKSMIQSL 297

Query: 385 VALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTK 206
           VAL TT+SEY+A+ E  KE++WL GL+ E+G  +G V ++ D+QS I L KN V+H RTK
Sbjct: 298 VALYTTKSEYMAIAETTKESLWLTGLVKELGIQQGGVQLYFDNQSAIYLEKNQVYHARTK 357

Query: 205 HIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKI 62
           HIDVRFH I ++V+ G + L+K+ +  N ADM TK +   KF  CLK+
Sbjct: 358 HIDVRFHKISELVSSGELLLKKVHTSENAADMLTKPVTTEKFKHCLKL 405


>emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]
          Length = 293

 Score =  169 bits (429), Expect = 3e-40
 Identities = 86/169 (50%), Positives = 122/169 (72%)
 Frame = -2

Query: 565 YLKHSVNVGLKFTKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHI 386
           YL+ + +  LKF ++ +G  L GYVDS++A D D R+S T YVFT+    VSWK+ LQ I
Sbjct: 123 YLRGTTDACLKFGRTDKG--LVGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQPI 180

Query: 385 VALSTTESEYVAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTK 206
           VA STTE+EY+A+ EA KE++WLKGL +E+  +   + +F DSQS I L K+ +FH+RTK
Sbjct: 181 VAQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSAICLTKDQMFHERTK 240

Query: 205 HIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 59
           HID+++HY+RDVVA+G + + KI +  NPADM TK +PV+KF  C  ++
Sbjct: 241 HIDIKYHYVRDVVAQGKLKVCKISTHDNPADMMTKPVPVAKFELCSSLV 289