BLASTX nr result
ID: Rehmannia24_contig00001531
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00001531
(1656 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY01950.1| Uncharacterized protein TCM_011728 [Theobroma cacao] 55 6e-14
gb|EOY05822.1| Uncharacterized protein TCM_020722 [Theobroma cacao] 52 4e-13
gb|EOY07366.1| Adenine nucleotide alpha hydrolases-like superfam... 52 5e-12
gb|EOY18934.1| Uncharacterized protein TCM_043452 [Theobroma cacao] 62 2e-11
gb|EOY27458.1| Leucine-rich repeat transmembrane protein kinase ... 48 2e-11
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 40 3e-10
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 42 4e-10
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 41 7e-10
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 41 7e-10
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 41 9e-10
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 41 9e-10
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 41 9e-10
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] 40 1e-09
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 40 2e-09
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 40 2e-09
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 39 3e-09
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 39 1e-08
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 41 2e-08
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 41 2e-08
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 40 2e-07
>gb|EOY01950.1| Uncharacterized protein TCM_011728 [Theobroma cacao]
Length = 176
Score = 55.1 bits (131), Expect(3) = 6e-14
Identities = 31/47 (65%), Positives = 35/47 (74%), Gaps = 5/47 (10%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVDS-----NSCD 862
GI VVKIKM DGV R+LGGVAYVPKMR NLIS +DS ++CD
Sbjct: 47 GIRVVKIKMFDGVVRSLGGVAYVPKMRKNLISLSLLDSKGFGYSACD 93
Score = 37.4 bits (85), Expect(3) = 6e-14
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 618 WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGLEW*KSK 761
W LDS H+ +D FDLLQ AG L G+ SI ++MG+ K K
Sbjct: 7 WYLDSASATHICYQKDCFDLLQEGVAGNLTLGNKSIVKVMGIRVVKIK 54
Score = 33.1 bits (74), Expect(3) = 6e-14
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 19/88 (21%)
Frame = +1
Query: 862 YSAGGGVLKITRGGRVLRMREKYRNLYRLVT------SRITGSGS-------APEGFQGT 1002
YSA GV+K+T+G VL + LYRL + TG GS A E +G+
Sbjct: 89 YSACDGVVKVTQGDMVLMRGNLHNGLYRLECEASKGWEQCTGDGSYQSEISFAEEVMKGS 148
Query: 1003 DGCEG-----NPAGRE-DGLGSSLSAVN 1068
G + N A E +G SLS VN
Sbjct: 149 HGVDDGERTKNLASSELEGSSRSLSEVN 176
>gb|EOY05822.1| Uncharacterized protein TCM_020722 [Theobroma cacao]
Length = 218
Score = 52.4 bits (124), Expect(3) = 4e-13
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 5/47 (10%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVDS-----NSCD 862
G+ VVKIKM DGV +LGGVAYVPKMR NLIS +DS ++CD
Sbjct: 89 GLAVVKIKMFDGVVLSLGGVAYVPKMRKNLISLSLLDSKGYGYSACD 135
Score = 40.0 bits (92), Expect(3) = 4e-13
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = +3
Query: 576 LTVSTRIDTSSRD*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGL 743
LT+S +D + W LDS H+ +D FDLLQ AG L G+ SI ++MGL
Sbjct: 37 LTISEDMDANFD--WYLDSASATHICYQKDCFDLLQEGMAGNLTLGNKSIVKVMGL 90
Score = 30.4 bits (67), Expect(3) = 4e-13
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Frame = +1
Query: 862 YSAGGGVLKITRGGRVLRMREKYRNLYRLVT------SRITGSGSAPEGFQGTDGCEGNP 1023
YSA GV+K+T+G VL + LYRL + TG GS + +
Sbjct: 131 YSACDGVVKVTQGDMVLMRGNLHNGLYRLECEASKGWEQCTGDGSYQSEISFVEEVMKDS 190
Query: 1024 AGREDG 1041
G +DG
Sbjct: 191 HGVDDG 196
>gb|EOY07366.1| Adenine nucleotide alpha hydrolases-like superfamily protein
[Theobroma cacao]
Length = 434
Score = 52.0 bits (123), Expect(3) = 5e-12
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 5/47 (10%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVDS-----NSCD 862
G+ VVKIKM DGV R+LGGVAYVPKM NLIS +DS ++CD
Sbjct: 305 GLVVVKIKMFDGVVRSLGGVAYVPKMHKNLISLSLLDSKGYGYSACD 351
Score = 38.9 bits (89), Expect(3) = 5e-12
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = +3
Query: 549 GDSCGSWRYLTVSTRIDTSSRD*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSIC 728
GD+C LT+S +D +S W LD H+ ++ FDLLQ G L G+ SI
Sbjct: 247 GDNCD---VLTISENMDANSD--WYLDFASATHICYQKNCFDLLQEGVTGNLTLGNKSIV 301
Query: 729 RIMGL 743
++MGL
Sbjct: 302 KVMGL 306
Score = 28.1 bits (61), Expect(3) = 5e-12
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Frame = +1
Query: 862 YSAGGGVLKITRGGRVLRMREKYRNLYRLVT------SRITGSGSAPEGFQGTDGCEGNP 1023
YSA GV+K+T+G VL + LY L + TG GS + +
Sbjct: 347 YSACDGVVKVTQGDMVLMRGNLHNGLYHLECEASKGWEQCTGDGSYQSEISLAEEVMKDS 406
Query: 1024 AGREDG 1041
G +DG
Sbjct: 407 HGVDDG 412
>gb|EOY18934.1| Uncharacterized protein TCM_043452 [Theobroma cacao]
Length = 166
Score = 62.4 bits (150), Expect(2) = 2e-11
Identities = 33/45 (73%), Positives = 35/45 (77%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVDSNSCDIQL 871
GIGVVKIKM DGV R+LGGVAYVPKMR NLIS +DS DI L
Sbjct: 47 GIGVVKIKMFDGVVRSLGGVAYVPKMRKNLISLSLLDSKGSDITL 91
Score = 35.4 bits (80), Expect(2) = 2e-11
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +3
Query: 618 WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGL 743
W LDS H+ +D FDLLQ G L G+ SI ++MG+
Sbjct: 7 WYLDSASATHICYQKDCFDLLQEVVVGNLTLGNKSIVKVMGI 48
>gb|EOY27458.1| Leucine-rich repeat transmembrane protein kinase [Theobroma cacao]
Length = 1179
Score = 47.8 bits (112), Expect(3) = 2e-11
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLIS 832
G+ VVKIKM DGV R+L G+AYVPKMR NLIS
Sbjct: 1075 GLEVVKIKMFDGVVRSLDGMAYVPKMRKNLIS 1106
Score = 44.7 bits (104), Expect(3) = 2e-11
Identities = 30/71 (42%), Positives = 39/71 (54%)
Frame = +3
Query: 549 GDSCGSWRYLTVSTRIDTSSRD*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSIC 728
GD C LT+S +D +S W L+S H+ +D FDLLQ AG L G+ SI
Sbjct: 1017 GDDCD---VLTISENMDANSY--WYLNSASATHICYQKDCFDLLQEGVAGNLTLGNKSIV 1071
Query: 729 RIMGLEW*KSK 761
++MGLE K K
Sbjct: 1072 KVMGLEVVKIK 1082
Score = 24.3 bits (51), Expect(3) = 2e-11
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 862 YSAGGGVLKITRGGRVLRMREKYRNLYRL 948
YSA GV+K+T+ VL + LY L
Sbjct: 1117 YSACDGVVKVTQRDMVLMRGNLHNGLYHL 1145
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 39.7 bits (91), Expect(3) = 3e-10
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVD 847
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 249 GIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLD 285
Score = 37.4 bits (85), Expect(3) = 3e-10
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 612 D*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGL 743
D WILD+ C H+ RD+F + + G + GD + C + G+
Sbjct: 207 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGI 250
Score = 35.8 bits (81), Expect(3) = 3e-10
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 859 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 981
+YS G G+LK+T+G V+ + KY NLY L + I G+ +A
Sbjct: 290 KYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGNVAA 331
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 42.4 bits (98), Expect(3) = 4e-10
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVD 847
GIG V+IKM DG RTL V ++P ++ +LIS+C +D
Sbjct: 306 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLD 342
Score = 37.4 bits (85), Expect(3) = 4e-10
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 612 D*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGL 743
D WILD+ C H+ RD+F + + G + GD + C + G+
Sbjct: 264 DQWILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGI 307
Score = 32.3 bits (72), Expect(3) = 4e-10
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 859 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 981
+YS G G+LK+T+G V+ + K NLY L + I G+ +A
Sbjct: 347 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 388
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 41.2 bits (95), Expect(3) = 7e-10
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVD 847
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 325 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 361
Score = 38.1 bits (87), Expect(3) = 7e-10
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 612 D*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGL 743
D WILD+ C H+ RD+F ++ + G + GD + C + G+
Sbjct: 283 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGI 326
Score = 32.0 bits (71), Expect(3) = 7e-10
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 859 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGS 972
+YS G G+LK+T+G V+ + K NLY L + I G+
Sbjct: 366 KYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGN 404
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 41.2 bits (95), Expect(3) = 7e-10
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVD 847
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 157 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 193
Score = 38.1 bits (87), Expect(3) = 7e-10
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 612 D*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGL 743
D WILD+ C H+ RD+F ++ + G + GD + C + G+
Sbjct: 115 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGI 158
Score = 32.0 bits (71), Expect(3) = 7e-10
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 859 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGS 972
+YS G G+LK+T+G V+ + K NLY L + I G+
Sbjct: 198 KYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGN 236
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 41.2 bits (95), Expect(3) = 9e-10
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVD 847
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 547 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 583
Score = 37.4 bits (85), Expect(3) = 9e-10
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 612 D*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGL 743
D WIL++ CI H+ RD+F + + G + GD + C + G+
Sbjct: 505 DQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGI 548
Score = 32.3 bits (72), Expect(3) = 9e-10
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 859 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 981
+YS G G+LK+T+G V+ + K NLY L + I G+ +A
Sbjct: 588 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 629
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 41.2 bits (95), Expect(3) = 9e-10
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVD 847
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 340 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376
Score = 37.4 bits (85), Expect(3) = 9e-10
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 612 D*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGL 743
D WIL++ CI H+ RD+F + + G + GD + C + G+
Sbjct: 298 DQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGI 341
Score = 32.3 bits (72), Expect(3) = 9e-10
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 859 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 981
+YS G G+LK+T+G V+ + K NLY L + I G+ +A
Sbjct: 381 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 422
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 41.2 bits (95), Expect(3) = 9e-10
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVD 847
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 340 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376
Score = 38.1 bits (87), Expect(3) = 9e-10
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 612 D*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGL 743
D WILD+ C H+ RD+F ++ + G + GD + C + G+
Sbjct: 298 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGI 341
Score = 31.6 bits (70), Expect(3) = 9e-10
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 859 RYSAGGGVLKITRGGR-VLRMREKYRNLYRLVTSRITGS 972
+YS G G+LK+T+G V++ K NLY L + I G+
Sbjct: 381 KYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGN 419
>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
Length = 344
Score = 40.4 bits (93), Expect(3) = 1e-09
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVDSNSC 859
GI ++IKM G+ RTL V +VPK+ NLI +DSN C
Sbjct: 275 GIHXIQIKMHGGIIRTLTNVRHVPKLNKNLIFLRTLDSNGC 315
Score = 38.5 bits (88), Expect(3) = 1e-09
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +3
Query: 600 TSSRD*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGL 743
T+S D WILDSGC H+ D+F Q G + G+ C+++G+
Sbjct: 229 TNSDDEWILDSGCSYHMSPNGDWFSTYQPIDGGKVLMGNKVACKVVGI 276
Score = 32.0 bits (71), Expect(3) = 1e-09
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 862 YSAGGGVLKITRGGRVLRMREKYRNLY 942
Y AGGGVL++++GG V+ +K LY
Sbjct: 317 YKAGGGVLRVSKGGLVVMNGKKINGLY 343
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 40.0 bits (92), Expect(3) = 2e-09
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVD 847
GIG+V+IKM DG TL V ++P ++ +LIS C +D
Sbjct: 172 GIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLD 208
Score = 37.4 bits (85), Expect(3) = 2e-09
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 612 D*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGL 743
D WILD+ C H+ RD+F + + G + GD + C + G+
Sbjct: 130 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGI 173
Score = 32.3 bits (72), Expect(3) = 2e-09
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 859 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 981
+YS G G+LK+T+G V+ + K NLY L + I G+ +A
Sbjct: 213 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 254
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 40.0 bits (92), Expect(3) = 2e-09
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVD 847
GIG+V+IKM DG TL V ++P ++ +LIS C +D
Sbjct: 172 GIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLD 208
Score = 37.4 bits (85), Expect(3) = 2e-09
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 612 D*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGL 743
D WILD+ C H+ RD+F + + G + GD + C + G+
Sbjct: 130 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGI 173
Score = 32.3 bits (72), Expect(3) = 2e-09
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 859 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 981
+YS G G+LK+T+G V+ + K NLY L + I G+ +A
Sbjct: 213 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 254
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 38.5 bits (88), Expect(3) = 3e-09
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 612 D*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGL 743
D W+LD+GC H+ RD+F + + G + GD + C++ G+
Sbjct: 240 DEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGV 283
Score = 38.5 bits (88), Expect(3) = 3e-09
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVD 847
G+G ++IKM DG RTL V ++P ++ NLIS +D
Sbjct: 282 GVGTIQIKMFDGCIRTLSDVRHIPSLKRNLISLSTLD 318
Score = 32.3 bits (72), Expect(3) = 3e-09
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 859 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 981
RYS G G+LK+T+G V+ + K +LY L + I G+ +A
Sbjct: 323 RYSGGDGILKVTKGSLVVMKADIKNADLYHLQGTTIVGNVAA 364
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 38.5 bits (88), Expect(3) = 1e-08
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 612 D*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGLE 746
D WILD+ C H+ RD+F + + G + GD + C + G+E
Sbjct: 298 DQWILDTACTYHMCLNRDWFATYEAVQGGTVLMGDDTPCEVAGVE 342
Score = 37.7 bits (86), Expect(3) = 1e-08
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVD 847
G+ V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 340 GVETVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376
Score = 30.8 bits (68), Expect(3) = 1e-08
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 859 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 981
+YS G G+LK+T+G V+ + K NLY + + I G+ +A
Sbjct: 381 KYSGGDGILKVTKGSLVVMKADIKSANLYHVRGTTILGNIAA 422
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 41.2 bits (95), Expect(3) = 2e-08
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVD 847
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 375 GIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLD 411
Score = 33.1 bits (74), Expect(3) = 2e-08
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 612 D*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGL 743
D WILD+ H+ RD+F + + G + GD + C + G+
Sbjct: 333 DQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGI 376
Score = 32.3 bits (72), Expect(3) = 2e-08
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 859 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 981
+YS G G+LK+T+G V+ + K NLY L + I G+ +A
Sbjct: 416 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 457
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 41.2 bits (95), Expect(3) = 2e-08
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVD 847
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 375 GIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLD 411
Score = 33.1 bits (74), Expect(3) = 2e-08
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 612 D*WILDSGCIMHVYS*RDYFDLLQLQRAGILFSGDGSICRIMGL 743
D WILD+ H+ RD+F + + G + GD + C + G+
Sbjct: 333 DQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGI 376
Score = 32.3 bits (72), Expect(3) = 2e-08
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 859 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 981
+YS G G+LK+T+G V+ + K NLY L + I G+ +A
Sbjct: 416 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 457
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 39.7 bits (91), Expect(3) = 2e-07
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +2
Query: 737 GIGVVKIKMGDGVDRTLGGVAYVPKMRVNLISWCQVDS 850
GIG V+IK DG+ RTL V Y+P M NLIS +D+
Sbjct: 331 GIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDA 368
Score = 36.2 bits (82), Expect(3) = 2e-07
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 603 SSRD*WILDSGCIMHVYS*RDYFDLLQ-LQRAGILFSGDGSICRIMGL 743
+ D WILDS C H+ + R++F + +Q+ ++ GD + C I+G+
Sbjct: 285 AGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGI 332
Score = 26.9 bits (58), Expect(3) = 2e-07
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 859 RYSAGGGVLKITRGGRV-LRMREKYRNLYRLVTSRITGSGSA 981
+YS GVLK+++G V L+ LY L +TGS SA
Sbjct: 372 KYSGSDGVLKVSKGSLVCLKGDVNSAKLYVLRGCTLTGSDSA 413