BLASTX nr result
ID: Rehmannia24_contig00001527
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00001527
(460 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS62468.1| hypothetical protein M569_12323 [Genlisea aurea] 85 1e-14
gb|AAP03872.1| putative photosystem I subunit III precursor [Nic... 84 3e-14
ref|XP_006353053.1| PREDICTED: photosystem I reaction center sub... 80 3e-13
ref|XP_006353052.1| PREDICTED: photosystem I reaction center sub... 80 3e-13
ref|XP_004233199.1| PREDICTED: photosystem I reaction center sub... 80 3e-13
ref|XP_004233198.1| PREDICTED: photosystem I reaction center sub... 80 3e-13
gb|AFW90599.1| photosystem I subunit III precursor (chloroplast)... 80 3e-13
sp|P46486.1|PSAF_FLATR RecName: Full=Photosystem I reaction cent... 78 1e-12
sp|P12355.1|PSAF_SPIOL RecName: Full=Photosystem I reaction cent... 70 3e-10
pdb|2O01|F Chain F, The Structure Of A Plant Photosystem I Super... 70 3e-10
ref|XP_004486401.1| PREDICTED: photosystem I reaction center sub... 70 4e-10
gb|AAF19787.1|AF162201_1 photosystem I subunit III [Lactuca sativa] 70 4e-10
dbj|BAA89234.1| unnamed protein product [Nicotiana tabacum] 68 1e-09
gb|AFK41712.1| unknown [Medicago truncatula] 67 2e-09
ref|XP_004293725.1| PREDICTED: photosystem I reaction center sub... 66 4e-09
ref|XP_004150631.1| PREDICTED: photosystem I reaction center sub... 66 4e-09
ref|XP_002272584.1| PREDICTED: photosystem I reaction center sub... 65 7e-09
emb|CAN76343.1| hypothetical protein VITISV_039382 [Vitis vinifera] 65 7e-09
ref|XP_006853392.1| hypothetical protein AMTR_s00032p00144550 [A... 65 1e-08
ref|XP_006448765.1| hypothetical protein CICLE_v10016540mg [Citr... 64 2e-08
>gb|EPS62468.1| hypothetical protein M569_12323 [Genlisea aurea]
Length = 240
Score = 84.7 bits (208), Expect = 1e-14
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPNV 341
TQKEIIIDVPLA+KL+WRGFSWPVAAYREYLNGELIDPNV
Sbjct: 201 TQKEIIIDVPLASKLVWRGFSWPVAAYREYLNGELIDPNV 240
>gb|AAP03872.1| putative photosystem I subunit III precursor [Nicotiana tabacum]
Length = 222
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPN 344
T KEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPN
Sbjct: 183 TMKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPN 221
>ref|XP_006353053.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Solanum tuberosum]
Length = 228
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPNV 341
T KEIIIDVPLAN+L+WRGF WPVAAYREYLNG+LIDPNV
Sbjct: 189 TMKEIIIDVPLANRLVWRGFIWPVAAYREYLNGDLIDPNV 228
>ref|XP_006353052.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Solanum tuberosum]
Length = 228
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPNV 341
T KEIIIDVPLAN+L+WRGF WPVAAYREYLNG+LIDPNV
Sbjct: 189 TMKEIIIDVPLANRLVWRGFIWPVAAYREYLNGDLIDPNV 228
>ref|XP_004233199.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Solanum lycopersicum]
Length = 228
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPNV 341
T KEIIIDVPLAN+L+WRGF WPVAAYREYLNG+LIDPNV
Sbjct: 189 TMKEIIIDVPLANRLVWRGFIWPVAAYREYLNGDLIDPNV 228
>ref|XP_004233198.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Solanum lycopersicum]
Length = 228
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPNV 341
T KEIIIDVPLAN+L+WRGF WPVAAYREYLNG+LIDPNV
Sbjct: 189 TMKEIIIDVPLANRLVWRGFIWPVAAYREYLNGDLIDPNV 228
>gb|AFW90599.1| photosystem I subunit III precursor (chloroplast) [Solanum
tuberosum]
Length = 228
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPNV 341
T KEIIIDVPLAN+L+WRGF WPVAAYREYLNG+LIDPNV
Sbjct: 189 TMKEIIIDVPLANRLVWRGFIWPVAAYREYLNGDLIDPNV 228
>sp|P46486.1|PSAF_FLATR RecName: Full=Photosystem I reaction center subunit III,
chloroplastic; AltName: Full=Light-harvesting complex I
17 kDa protein; AltName: Full=PSI-F; Flags: Precursor
gi|168173|gb|AAA33344.1| photosystem I subunit III
[Flaveria trinervia] gi|298482|gb|AAB25669.1|
photosystem I reaction center subunit III, PSI-RC PsaF
[Flaveria trinervia, Peptide, 232 aa]
Length = 232
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPNV 341
TQKEIIIDVPLA KL++RGFSWPVAAYREYLNGELIDP V
Sbjct: 193 TQKEIIIDVPLATKLLFRGFSWPVAAYREYLNGELIDPTV 232
>sp|P12355.1|PSAF_SPIOL RecName: Full=Photosystem I reaction center subunit III,
chloroplastic; AltName: Full=Light-harvesting complex I
17 kDa protein; AltName: Full=PSI-F; Flags: Precursor
gi|268612149|pdb|2WSC|F Chain F, Improved Model Of Plant
Photosystem I gi|268612167|pdb|2WSE|F Chain F, Improved
Model Of Plant Photosystem I gi|268612185|pdb|2WSF|F
Chain F, Improved Model Of Plant Photosystem I
gi|21303|emb|CAA31523.1| PSI subunit IV preprotein (AA
-77 to 154) [Spinacia oleracea] gi|226166|prf||1413236A
photosystem I reaction center IV
Length = 231
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPN 344
TQKEIIIDVPLA+ L++RGFSWPVAAYRE LNGEL+D N
Sbjct: 192 TQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNN 230
>pdb|2O01|F Chain F, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution gi|303324969|pdb|3LW5|F Chain F,
Improved Model Of Plant Photosystem I
Length = 154
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPN 344
TQKEIIIDVPLA+ L++RGFSWPVAAYRE LNGEL+D N
Sbjct: 115 TQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNN 153
>ref|XP_004486401.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Cicer arietinum]
Length = 223
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/40 (77%), Positives = 38/40 (95%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPNV 341
TQKEIIIDVPLA++L++RGFSWP+AAYRE+LNGELI +V
Sbjct: 184 TQKEIIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 223
>gb|AAF19787.1|AF162201_1 photosystem I subunit III [Lactuca sativa]
Length = 140
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPNV 341
T KEIIIDVPLA+ L++RGF WPVAAYRE LNGELIDP+V
Sbjct: 101 TMKEIIIDVPLASSLVFRGFIWPVAAYRELLNGELIDPSV 140
>dbj|BAA89234.1| unnamed protein product [Nicotiana tabacum]
Length = 79
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/39 (82%), Positives = 32/39 (82%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPN 344
T KEIIIDVPLAN RGFSWPVAAY EYLNGEL DPN
Sbjct: 40 TMKEIIIDVPLANSSSGRGFSWPVAAYSEYLNGELTDPN 78
>gb|AFK41712.1| unknown [Medicago truncatula]
Length = 224
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/40 (75%), Positives = 37/40 (92%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPNV 341
TQKEIIIDVPLA++L++RGFSWP+AAYRE +NGELI +V
Sbjct: 185 TQKEIIIDVPLASRLVFRGFSWPIAAYRELVNGELIAKDV 224
>ref|XP_004293725.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 225
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPNV 341
TQKEIIIDVPLA L++RGFSWP+AAYRE LNGELI +V
Sbjct: 186 TQKEIIIDVPLATGLVFRGFSWPIAAYRELLNGELIAKDV 225
>ref|XP_004150631.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Cucumis sativus]
gi|449487680|ref|XP_004157747.1| PREDICTED: photosystem
I reaction center subunit III, chloroplastic-like
[Cucumis sativus]
Length = 224
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPNV 341
TQKEIIIDVPLA L++RGFSWPVAAYRE +NGELI +V
Sbjct: 185 TQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224
>ref|XP_002272584.1| PREDICTED: photosystem I reaction center subunit III, chloroplastic
isoform 1 [Vitis vinifera]
gi|359495313|ref|XP_003634953.1| PREDICTED: photosystem
I reaction center subunit III, chloroplastic isoform 2
[Vitis vinifera]
Length = 221
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/40 (72%), Positives = 37/40 (92%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPNV 341
TQKEIIIDVPLA++L++RGF WPVAAYRE++NG+LI +V
Sbjct: 182 TQKEIIIDVPLASRLVFRGFIWPVAAYREFVNGDLIAKDV 221
>emb|CAN76343.1| hypothetical protein VITISV_039382 [Vitis vinifera]
Length = 221
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/40 (72%), Positives = 37/40 (92%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPNV 341
TQKEIIIDVPLA++L++RGF WPVAAYRE++NG+LI +V
Sbjct: 182 TQKEIIIDVPLASRLVFRGFIWPVAAYREFVNGDLIAKDV 221
>ref|XP_006853392.1| hypothetical protein AMTR_s00032p00144550 [Amborella trichopoda]
gi|548857045|gb|ERN14859.1| hypothetical protein
AMTR_s00032p00144550 [Amborella trichopoda]
Length = 226
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = -1
Query: 460 TQKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELI 353
TQKEIIIDVPLA+ L+WRGF WPVAA REY+NG+L+
Sbjct: 182 TQKEIIIDVPLASGLLWRGFIWPVAALREYVNGDLV 217
>ref|XP_006448765.1| hypothetical protein CICLE_v10016540mg [Citrus clementina]
gi|567912905|ref|XP_006448766.1| hypothetical protein
CICLE_v10016540mg [Citrus clementina]
gi|568828180|ref|XP_006468422.1| PREDICTED: photosystem
I reaction center subunit III, chloroplastic-like
[Citrus sinensis] gi|557551376|gb|ESR62005.1|
hypothetical protein CICLE_v10016540mg [Citrus
clementina] gi|557551377|gb|ESR62006.1| hypothetical
protein CICLE_v10016540mg [Citrus clementina]
Length = 230
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/38 (73%), Positives = 36/38 (94%)
Frame = -1
Query: 454 KEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPNV 341
KEIIIDVPLA++L++RGFSWPVAAYRE++NGEL+ +V
Sbjct: 193 KEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKDV 230