BLASTX nr result

ID: Rehmannia24_contig00001520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00001520
         (359 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280114.1| PREDICTED: uncharacterized protein At4g01150...    58   1e-06
ref|XP_002302615.2| calmodulin 2 family protein [Populus trichoc...    56   4e-06
ref|XP_006491220.1| PREDICTED: protein CURVATURE THYLAKOID 1A, c...    55   1e-05
ref|XP_006444903.1| hypothetical protein CICLE_v10022116mg [Citr...    55   1e-05

>ref|XP_002280114.1| PREDICTED: uncharacterized protein At4g01150, chloroplastic [Vitis
           vinifera]
          Length = 166

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 39/73 (53%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
 Frame = -1

Query: 203 VLMHRLPATKHAVVFSP------LPNRLSLSSTPFKQLKEHTRSSQLLVKASSSDETSLD 42
           VLM RLPAT  A   +       LP RLS SS  F   +   R S L V+ASSS+ETSL+
Sbjct: 18  VLMPRLPATAAANAATRCSALPYLPPRLSSSSNHFSGSR---RFSSLQVRASSSEETSLN 74

Query: 41  ANELFTDLKEKWD 3
             ELFTDLK KWD
Sbjct: 75  TEELFTDLKAKWD 87


>ref|XP_002302615.2| calmodulin 2 family protein [Populus trichocarpa]
           gi|550345179|gb|EEE81888.2| calmodulin 2 family protein
           [Populus trichocarpa]
          Length = 160

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
 Frame = -1

Query: 152 LPNRLSLSSTPFKQ--LKEHTRSSQLLVKASSSDETSLDANELFTDLKEKWD 3
           LP R S  S P K   L E  R + L ++ASSS+E+S+DANE+FTDLKEKWD
Sbjct: 30  LPPRSSSRSFPIKHVSLSESHRFAPLQIRASSSEESSVDANEVFTDLKEKWD 81


>ref|XP_006491220.1| PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic-like
           [Citrus sinensis]
          Length = 164

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 10/77 (12%)
 Frame = -1

Query: 203 VLMHRLPAT-------KHAVVFSPLPNRLSLS--STPFKQLKEHTRSSQLLVKASSSDET 51
           VL  R+P+T        H      LP R S S  S+  KQ+ E  R   L V+ASSS+ET
Sbjct: 9   VLTPRVPSTTTVKVKSSHCFALPCLPPRSSTSPFSSSIKQVSESRRFPLLQVRASSSEET 68

Query: 50  S-LDANELFTDLKEKWD 3
           S +DA+ELF+DLKEKWD
Sbjct: 69  STVDADELFSDLKEKWD 85


>ref|XP_006444903.1| hypothetical protein CICLE_v10022116mg [Citrus clementina]
           gi|557547165|gb|ESR58143.1| hypothetical protein
           CICLE_v10022116mg [Citrus clementina]
          Length = 224

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 10/77 (12%)
 Frame = -1

Query: 203 VLMHRLPAT-------KHAVVFSPLPNRLSLS--STPFKQLKEHTRSSQLLVKASSSDET 51
           VL  R+P+T        H      LP R S S  S+  KQ+ E  R   L V+ASSS+ET
Sbjct: 69  VLTPRVPSTTTVKVKSSHCFALPCLPPRSSTSPFSSSIKQVSESRRFPLLQVRASSSEET 128

Query: 50  S-LDANELFTDLKEKWD 3
           S +DA+ELF+DLKEKWD
Sbjct: 129 STVDADELFSDLKEKWD 145


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