BLASTX nr result
ID: Rehmannia24_contig00000288
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00000288
(591 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006363306.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 118 1e-24
ref|XP_004237950.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 118 1e-24
gb|EPS70093.1| hypothetical protein M569_04668, partial [Genlise... 114 3e-23
ref|XP_006288345.1| hypothetical protein CARUB_v10001593mg [Caps... 105 9e-21
ref|XP_006397214.1| hypothetical protein EUTSA_v10028847mg [Eutr... 105 1e-20
ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 105 1e-20
emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera] 105 1e-20
dbj|BAD43393.1| putative protein [Arabidopsis thaliana] 104 2e-20
ref|NP_192643.2| RNA recognition motif-containing protein [Arabi... 104 2e-20
ref|XP_002872360.1| hypothetical protein ARALYDRAFT_489706 [Arab... 104 2e-20
ref|NP_001078360.1| RNA recognition motif-containing protein [Ar... 104 2e-20
emb|CAB78028.1| putative protein [Arabidopsis thaliana] 104 2e-20
gb|EOY15917.1| RNA-binding family protein, putative [Theobroma c... 102 8e-20
gb|EXB86655.1| 28 kDa ribonucleoprotein [Morus notabilis] 99 8e-19
ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 99 8e-19
ref|XP_003526568.2| PREDICTED: 30 kDa ribonucleoprotein, chlorop... 98 2e-18
gb|ACU23303.1| unknown [Glycine max] 98 2e-18
ref|XP_002306558.1| RNA recognition motif-containing family prot... 97 2e-18
ref|XP_006433910.1| hypothetical protein CICLE_v10001605mg [Citr... 97 4e-18
ref|XP_003522779.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 97 4e-18
>ref|XP_006363306.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Solanum
tuberosum]
Length = 284
Score = 118 bits (296), Expect = 1e-24
Identities = 57/77 (74%), Positives = 67/77 (87%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
L +FF A+ ANVVSAE+I+NDNPRRSAGYGFVS NTK EADAAL +F GKEFMGR +RVA
Sbjct: 197 LLEFFKANGANVVSAEVIFNDNPRRSAGYGFVSLNTKEEADAALSSFDGKEFMGRAIRVA 256
Query: 283 RSKRFLRQETKATIESE 333
+SKRFLR+ETK I+S+
Sbjct: 257 QSKRFLREETKKAIQSQ 273
>ref|XP_004237950.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Solanum
lycopersicum]
Length = 278
Score = 118 bits (295), Expect = 1e-24
Identities = 57/77 (74%), Positives = 67/77 (87%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
L +FF A+ ANVVSAE+I+NDNPRRSAGYGFVS NTK EADAAL +F GKEFMGR +RVA
Sbjct: 191 LLEFFKANGANVVSAEVIFNDNPRRSAGYGFVSLNTKEEADAALSSFDGKEFMGRAIRVA 250
Query: 283 RSKRFLRQETKATIESE 333
+SKRFLR+ETK I+S+
Sbjct: 251 QSKRFLREETKKVIKSQ 267
>gb|EPS70093.1| hypothetical protein M569_04668, partial [Genlisea aurea]
Length = 263
Score = 114 bits (284), Expect = 3e-23
Identities = 58/78 (74%), Positives = 65/78 (83%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
LKDFFNA VSAE+IYN+NPRR AGYGFVSF TK EADAAL +FQ KEFMGRP+RVA
Sbjct: 191 LKDFFNA-----VSAEVIYNENPRRPAGYGFVSFYTKEEADAALTSFQAKEFMGRPIRVA 245
Query: 283 RSKRFLRQETKATIESES 336
RSKRFLR+ TKA I+ E+
Sbjct: 246 RSKRFLREGTKAAIQLEN 263
>ref|XP_006288345.1| hypothetical protein CARUB_v10001593mg [Capsella rubella]
gi|565460694|ref|XP_006288346.1| hypothetical protein
CARUB_v10001593mg [Capsella rubella]
gi|482557051|gb|EOA21243.1| hypothetical protein
CARUB_v10001593mg [Capsella rubella]
gi|482557052|gb|EOA21244.1| hypothetical protein
CARUB_v10001593mg [Capsella rubella]
Length = 297
Score = 105 bits (262), Expect = 9e-21
Identities = 45/75 (60%), Positives = 65/75 (86%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
LK+FF+AD NVVS E+I+++NPRRS+GYGFVSF TK +A+AA++ FQGK+FMGRP+R+A
Sbjct: 195 LKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAAIIEFQGKDFMGRPIRLA 254
Query: 283 RSKRFLRQETKATIE 327
RSK+F++ + K ++
Sbjct: 255 RSKQFVKLQAKEGLQ 269
>ref|XP_006397214.1| hypothetical protein EUTSA_v10028847mg [Eutrema salsugineum]
gi|557098231|gb|ESQ38667.1| hypothetical protein
EUTSA_v10028847mg [Eutrema salsugineum]
Length = 298
Score = 105 bits (261), Expect = 1e-20
Identities = 47/76 (61%), Positives = 65/76 (85%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
LK+FF+AD NVVS E+I+++NPRRS+GYGFVSF TK A+AALV FQGK+FMGRP+R+A
Sbjct: 200 LKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMAEAALVDFQGKDFMGRPIRLA 259
Query: 283 RSKRFLRQETKATIES 330
RSK+F++ + K +++
Sbjct: 260 RSKQFVKLQAKEGLQA 275
>ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|302142004|emb|CBI19207.3| unnamed protein product
[Vitis vinifera]
Length = 294
Score = 105 bits (261), Expect = 1e-20
Identities = 47/77 (61%), Positives = 67/77 (87%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
L++FF++ N NVVSAE+I+++NPRRS+GYGFVSF +K EAD AL +FQG+ FMGRP+RVA
Sbjct: 199 LREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVA 258
Query: 283 RSKRFLRQETKATIESE 333
RS+RF+++E K + ++E
Sbjct: 259 RSRRFVKRENKMSDQTE 275
>emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
Length = 294
Score = 105 bits (261), Expect = 1e-20
Identities = 47/77 (61%), Positives = 67/77 (87%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
L++FF++ N NVVSAE+I+++NPRRS+GYGFVSF +K EAD AL +FQG+ FMGRP+RVA
Sbjct: 199 LREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVA 258
Query: 283 RSKRFLRQETKATIESE 333
RS+RF+++E K + ++E
Sbjct: 259 RSRRFVKRENKMSDQTE 275
>dbj|BAD43393.1| putative protein [Arabidopsis thaliana]
Length = 304
Score = 104 bits (260), Expect = 2e-20
Identities = 45/81 (55%), Positives = 67/81 (82%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
LK+FF+AD NVVS E+I+++NPRRS+GYGFVSF TK +A+AAL+ FQGK+F+GRP+R+A
Sbjct: 205 LKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRLA 264
Query: 283 RSKRFLRQETKATIESESAKA 345
+SK+F++ + K ++ +A
Sbjct: 265 KSKQFVKLQAKEGLQPPEEEA 285
>ref|NP_192643.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|38603886|gb|AAR24688.1| At4g09040 [Arabidopsis
thaliana] gi|51968384|dbj|BAD42884.1| putative protein
[Arabidopsis thaliana] gi|51969486|dbj|BAD43435.1|
putative protein [Arabidopsis thaliana]
gi|51969588|dbj|BAD43486.1| putative protein
[Arabidopsis thaliana] gi|51970774|dbj|BAD44079.1|
putative protein [Arabidopsis thaliana]
gi|62319325|dbj|BAD94588.1| hypothetical protein
[Arabidopsis thaliana] gi|332657315|gb|AEE82715.1| RNA
recognition motif-containing protein [Arabidopsis
thaliana]
Length = 304
Score = 104 bits (260), Expect = 2e-20
Identities = 45/81 (55%), Positives = 67/81 (82%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
LK+FF+AD NVVS E+I+++NPRRS+GYGFVSF TK +A+AAL+ FQGK+F+GRP+R+A
Sbjct: 205 LKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRLA 264
Query: 283 RSKRFLRQETKATIESESAKA 345
+SK+F++ + K ++ +A
Sbjct: 265 KSKQFVKLQAKEGLQPPEEEA 285
>ref|XP_002872360.1| hypothetical protein ARALYDRAFT_489706 [Arabidopsis lyrata subsp.
lyrata] gi|297318197|gb|EFH48619.1| hypothetical protein
ARALYDRAFT_489706 [Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 104 bits (260), Expect = 2e-20
Identities = 45/75 (60%), Positives = 64/75 (85%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
LK+FF+AD NVVS E+I+ +NPRRS+GYGFVSF TK +A+AAL+ FQGK+FMGRP+R+A
Sbjct: 203 LKEFFDADTGNVVSTEVIFQENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFMGRPIRLA 262
Query: 283 RSKRFLRQETKATIE 327
+SK+F++ + K ++
Sbjct: 263 KSKQFVKLQAKEGLQ 277
>ref|NP_001078360.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332657316|gb|AEE82716.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 244
Score = 104 bits (260), Expect = 2e-20
Identities = 45/81 (55%), Positives = 67/81 (82%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
LK+FF+AD NVVS E+I+++NPRRS+GYGFVSF TK +A+AAL+ FQGK+F+GRP+R+A
Sbjct: 145 LKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRLA 204
Query: 283 RSKRFLRQETKATIESESAKA 345
+SK+F++ + K ++ +A
Sbjct: 205 KSKQFVKLQAKEGLQPPEEEA 225
>emb|CAB78028.1| putative protein [Arabidopsis thaliana]
Length = 225
Score = 104 bits (260), Expect = 2e-20
Identities = 45/81 (55%), Positives = 67/81 (82%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
LK+FF+AD NVVS E+I+++NPRRS+GYGFVSF TK +A+AAL+ FQGK+F+GRP+R+A
Sbjct: 126 LKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRLA 185
Query: 283 RSKRFLRQETKATIESESAKA 345
+SK+F++ + K ++ +A
Sbjct: 186 KSKQFVKLQAKEGLQPPEEEA 206
>gb|EOY15917.1| RNA-binding family protein, putative [Theobroma cacao]
Length = 290
Score = 102 bits (254), Expect = 8e-20
Identities = 45/70 (64%), Positives = 64/70 (91%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
LK+FF+++ ANVVSAE+I+++NPR+S+GYGFVSF +K EADAA+ AFQGK FMGRP+RVA
Sbjct: 196 LKEFFSSEGANVVSAEVIFHENPRKSSGYGFVSFKSKKEADAAMSAFQGKMFMGRPIRVA 255
Query: 283 RSKRFLRQET 312
RS++F++ ++
Sbjct: 256 RSRQFVKVQS 265
>gb|EXB86655.1| 28 kDa ribonucleoprotein [Morus notabilis]
Length = 605
Score = 99.0 bits (245), Expect = 8e-19
Identities = 45/77 (58%), Positives = 65/77 (84%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
L++FFN++ +VVSAE+I+++NPRRS GYGFV+F +K EA+AAL A QGK FMGRP+RVA
Sbjct: 516 LREFFNSEGHSVVSAEVIFHENPRRSLGYGFVAFKSKKEAEAALSAVQGKIFMGRPIRVA 575
Query: 283 RSKRFLRQETKATIESE 333
RS++F++Q T + ++E
Sbjct: 576 RSRQFVKQPTGESAKTE 592
>ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus] gi|449497014|ref|XP_004160289.1| PREDICTED: 31
kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 300
Score = 99.0 bits (245), Expect = 8e-19
Identities = 46/79 (58%), Positives = 65/79 (82%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
LK+FF++ + NVVSA+II+N+NPRRS+GYGFV+F TK +A+AA+ FQGK FMGR +RVA
Sbjct: 208 LKEFFDSGSGNVVSAQIIFNENPRRSSGYGFVAFKTKKDAEAAISEFQGKTFMGRSLRVA 267
Query: 283 RSKRFLRQETKATIESESA 339
RSK+F++ ++ +SE A
Sbjct: 268 RSKQFVKLPSEEKPQSEDA 286
>ref|XP_003526568.2| PREDICTED: 30 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 345
Score = 97.8 bits (242), Expect = 2e-18
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +1
Query: 91 SKWSLKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRP 270
S LK+FF+ VVSAE++Y DNPRR +GYGFVSF +K EA+AAL FQGK FMGRP
Sbjct: 224 SSKDLKEFFDLGTGRVVSAEVVYRDNPRRPSGYGFVSFKSKKEAEAALAEFQGKVFMGRP 283
Query: 271 VRVARSKRFLRQETKATIESE 333
+RV R +RF++Q + +SE
Sbjct: 284 IRVDRGRRFVQQPGDGSAKSE 304
>gb|ACU23303.1| unknown [Glycine max]
Length = 315
Score = 97.8 bits (242), Expect = 2e-18
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +1
Query: 91 SKWSLKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRP 270
S LK+FF+ VVSAE++Y DNPRR +GYGFVSF +K EA+AAL FQGK FMGRP
Sbjct: 194 SSKDLKEFFDLGTGRVVSAEVVYRDNPRRPSGYGFVSFKSKKEAEAALAEFQGKVFMGRP 253
Query: 271 VRVARSKRFLRQETKATIESE 333
+RV R +RF++Q + +SE
Sbjct: 254 IRVDRGRRFVQQPGDGSAKSE 274
>ref|XP_002306558.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222856007|gb|EEE93554.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 309
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/77 (59%), Positives = 61/77 (79%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
LK+FF A+ ANVVSAEII++DNPRR +GYGFV+F TK EAD A+ F KEFMGR +RVA
Sbjct: 214 LKEFFIAEGANVVSAEIIFHDNPRRPSGYGFVAFKTKKEADYAISTFSDKEFMGRQLRVA 273
Query: 283 RSKRFLRQETKATIESE 333
RS++F++Q + +S+
Sbjct: 274 RSRQFVKQRKEDAAQSD 290
>ref|XP_006433910.1| hypothetical protein CICLE_v10001605mg [Citrus clementina]
gi|557536032|gb|ESR47150.1| hypothetical protein
CICLE_v10001605mg [Citrus clementina]
Length = 363
Score = 96.7 bits (239), Expect = 4e-18
Identities = 46/77 (59%), Positives = 63/77 (81%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
L++FF ++ +VVSAE+I++DNPRRSAGYGFVSF +K A+AA+ AFQGK FMGRP+RVA
Sbjct: 268 LREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAEAAISAFQGKLFMGRPLRVA 327
Query: 283 RSKRFLRQETKATIESE 333
S++F R +TK + S+
Sbjct: 328 PSRQFARLQTKEGLHSD 344
>ref|XP_003522779.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like isoform
X1 [Glycine max] gi|571450000|ref|XP_006578310.1|
PREDICTED: 29 kDa ribonucleoprotein A,
chloroplastic-like isoform X2 [Glycine max]
Length = 297
Score = 96.7 bits (239), Expect = 4e-18
Identities = 44/77 (57%), Positives = 59/77 (76%)
Frame = +1
Query: 103 LKDFFNADNANVVSAEIIYNDNPRRSAGYGFVSFNTKAEADAALVAFQGKEFMGRPVRVA 282
LK+FF++ VVSAE++Y DNPRR +GYGFVS+ +K EA+AAL FQGK FMGRP+RV
Sbjct: 180 LKEFFDSGTGKVVSAEVVYRDNPRRPSGYGFVSYKSKKEAEAALAEFQGKIFMGRPIRVD 239
Query: 283 RSKRFLRQETKATIESE 333
R +RF++Q + +SE
Sbjct: 240 RGRRFVQQPGDGSAKSE 256