BLASTX nr result

ID: Rehmannia23_contig00033800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00033800
         (372 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006369517.1| hypothetical protein POPTR_0001s24440g [Popu...    60   3e-07
gb|ABK94520.1| unknown [Populus trichocarpa]                           60   3e-07

>ref|XP_006369517.1| hypothetical protein POPTR_0001s24440g [Populus trichocarpa]
           gi|550348085|gb|ERP66086.1| hypothetical protein
           POPTR_0001s24440g [Populus trichocarpa]
          Length = 109

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
 Frame = +3

Query: 18  VLLIWLVFVAFQQ----GVSIQETKSVSFKISPAAYKSTNTGGNIRKVLINTRAANEKKV 185
           +LL WL+ VA QQ     + +Q  ++V FK +PA   S +  GN+  V +      EK++
Sbjct: 36  LLLAWLLLVASQQRFSSNIKVQAVEAVHFKPNPAQLTSKSHKGNVLPVWVA-----EKRI 90

Query: 186 RTKTPSGPSPVGNHRPPSK 242
             K+PSGP+PVGNH PPSK
Sbjct: 91  H-KSPSGPNPVGNHNPPSK 108


>gb|ABK94520.1| unknown [Populus trichocarpa]
          Length = 89

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
 Frame = +3

Query: 18  VLLIWLVFVAFQQ----GVSIQETKSVSFKISPAAYKSTNTGGNIRKVLINTRAANEKKV 185
           +LL WL+ VA QQ     + +Q  ++V FK +PA   S +  GN+  V +      EK++
Sbjct: 16  LLLAWLLLVASQQRFSSNIKVQAVEAVHFKPNPAQLTSKSHKGNVLPVWVA-----EKRI 70

Query: 186 RTKTPSGPSPVGNHRPPSK 242
             K+PSGP+PVGNH PPSK
Sbjct: 71  H-KSPSGPNPVGNHNPPSK 88


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