BLASTX nr result

ID: Rehmannia23_contig00033798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00033798
         (491 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351191.1| PREDICTED: F-box protein SKIP23-like [Solanu...    77   2e-12
ref|XP_004250438.1| PREDICTED: F-box protein SKIP23-like [Solanu...    72   6e-11
ref|XP_006351104.1| PREDICTED: F-box protein SKIP23-like [Solanu...    71   1e-10
ref|XP_006351193.1| PREDICTED: F-box protein SKIP23-like [Solanu...    70   3e-10
ref|XP_006351198.1| PREDICTED: F-box protein SKIP23-like [Solanu...    64   2e-08

>ref|XP_006351191.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
          Length = 442

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 31/46 (67%), Positives = 39/46 (84%)
 Frame = +3

Query: 228 SDDVKLKFRGLHGHNTGVCDFESGKIGSLLMFHEYADIFWPPPSWL 365
           S +VKL+++GLHGH+TG+   + GK+GSLL F EYADIFWPPPSWL
Sbjct: 374 SKEVKLRYKGLHGHHTGIFSLQDGKLGSLLSFLEYADIFWPPPSWL 419


>ref|XP_004250438.1| PREDICTED: F-box protein SKIP23-like [Solanum lycopersicum]
          Length = 372

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 29/46 (63%), Positives = 37/46 (80%)
 Frame = +3

Query: 228 SDDVKLKFRGLHGHNTGVCDFESGKIGSLLMFHEYADIFWPPPSWL 365
           S++VKL++ GL GH+TG+     GK+GSLL F EYADIFWPPPSW+
Sbjct: 291 SEEVKLRYEGLDGHHTGIFSLRDGKLGSLLSFIEYADIFWPPPSWI 336


>ref|XP_006351104.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
          Length = 433

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 28/46 (60%), Positives = 38/46 (82%)
 Frame = +3

Query: 228 SDDVKLKFRGLHGHNTGVCDFESGKIGSLLMFHEYADIFWPPPSWL 365
           S++VKL+++GLHG +TG+   + GK+GSL+ F EYADIFWPP SWL
Sbjct: 362 SEEVKLRYKGLHGQHTGIITLQDGKLGSLISFLEYADIFWPPSSWL 407


>ref|XP_006351193.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
          Length = 432

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 28/46 (60%), Positives = 37/46 (80%)
 Frame = +3

Query: 228 SDDVKLKFRGLHGHNTGVCDFESGKIGSLLMFHEYADIFWPPPSWL 365
           S++VKL+++GLH  +TG+   + GK+GSL  F EYADIFWPPPSWL
Sbjct: 345 SEEVKLRYKGLHDQHTGIITLQDGKLGSLSSFLEYADIFWPPPSWL 390


>ref|XP_006351198.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
          Length = 413

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = +3

Query: 228 SDDVKLKFRGLHGHNTGVCDFESGKIGSLLMFHEYADIFWPPPSWL 365
           S++VKL+++GLH   TG+   + GK+GSL  F EYADIFWP P WL
Sbjct: 340 SEEVKLRYKGLHDQLTGIITLQDGKLGSLSSFREYADIFWPTPFWL 385


Top