BLASTX nr result
ID: Rehmannia23_contig00033745
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00033745
(482 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004231241.1| PREDICTED: pentatricopeptide repeat-containi... 219 4e-55
ref|XP_006347788.1| PREDICTED: pentatricopeptide repeat-containi... 216 2e-54
ref|XP_006421917.1| hypothetical protein CICLE_v10004849mg [Citr... 194 1e-47
gb|EOY23190.1| Pentatricopeptide repeat (PPR) superfamily protei... 192 3e-47
emb|CBI22748.3| unnamed protein product [Vitis vinifera] 191 7e-47
ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containi... 191 7e-47
gb|EXC15982.1| hypothetical protein L484_015785 [Morus notabilis] 186 2e-45
ref|XP_002510791.1| pentatricopeptide repeat-containing protein,... 183 2e-44
gb|EMJ21260.1| hypothetical protein PRUPE_ppa025794mg [Prunus pe... 181 1e-43
ref|XP_004496572.1| PREDICTED: pentatricopeptide repeat-containi... 179 4e-43
ref|XP_003556107.1| PREDICTED: pentatricopeptide repeat-containi... 178 8e-43
ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containi... 177 1e-42
gb|ESW15401.1| hypothetical protein PHAVU_007G069900g [Phaseolus... 177 2e-42
ref|XP_003638369.1| Pentatricopeptide repeat-containing protein ... 175 5e-42
gb|EPS57950.1| hypothetical protein M569_16866, partial [Genlise... 167 1e-39
ref|XP_004308089.1| PREDICTED: pentatricopeptide repeat-containi... 166 2e-39
ref|XP_002894516.1| pentatricopeptide repeat-containing protein ... 162 6e-38
ref|XP_004157226.1| PREDICTED: pentatricopeptide repeat-containi... 160 2e-37
ref|XP_004140840.1| PREDICTED: pentatricopeptide repeat-containi... 159 3e-37
ref|XP_006307100.1| hypothetical protein CARUB_v10008686mg [Caps... 159 4e-37
>ref|XP_004231241.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like [Solanum lycopersicum]
Length = 491
Score = 219 bits (557), Expect = 4e-55
Identities = 107/164 (65%), Positives = 129/164 (78%), Gaps = 4/164 (2%)
Frame = +3
Query: 3 RIEDFLNESWKSTNIDKVDEKNSTLYDSHGYWGAKGGFEG----NVSARKGFVDEVKSDA 170
RIED+LNESWKS N N+ + D+ ++G G +EG N S+R F+++V+++A
Sbjct: 41 RIEDYLNESWKSMN------SNNNMKDNVDFFGVNGFYEGHSQQNFSSRHNFIEKVRNEA 94
Query: 171 ARILEVLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYANKNRCAKLGYKFFV 350
+ ILE+L QDGPGFDAK L + + VS LLVREVLLGILK INYANKNRCAKLGYKFFV
Sbjct: 95 SMILEILQQDGPGFDAKAALENSHITVSSLLVREVLLGILKIINYANKNRCAKLGYKFFV 154
Query: 351 WSGEQENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
WSG+QENYRHT N YH++M IFAES+EFKAMWRLVDEMIEKGYP
Sbjct: 155 WSGQQENYRHTANSYHLIMKIFAESDEFKAMWRLVDEMIEKGYP 198
>ref|XP_006347788.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like [Solanum tuberosum]
Length = 491
Score = 216 bits (551), Expect = 2e-54
Identities = 105/160 (65%), Positives = 127/160 (79%)
Frame = +3
Query: 3 RIEDFLNESWKSTNIDKVDEKNSTLYDSHGYWGAKGGFEGNVSARKGFVDEVKSDAARIL 182
+IED+LNESWKS N D + N +G + +G F+ S+R F+++V+++A+ IL
Sbjct: 41 KIEDYLNESWKSMNSDNNMKDNVDFIGINGCY--EGHFQQKFSSRHNFIEKVRNEASMIL 98
Query: 183 EVLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYANKNRCAKLGYKFFVWSGE 362
E+L QDGPGFDAK L + + VS LLVREVLLGILKTINYANKNRCAKLGYKFFVWSG+
Sbjct: 99 EILQQDGPGFDAKAALDNSHITVSSLLVREVLLGILKTINYANKNRCAKLGYKFFVWSGQ 158
Query: 363 QENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
QENYRHT N YH++M IFAES+EFKAMWRLVDEMIEKGYP
Sbjct: 159 QENYRHTANSYHLIMKIFAESDEFKAMWRLVDEMIEKGYP 198
>ref|XP_006421917.1| hypothetical protein CICLE_v10004849mg [Citrus clementina]
gi|568874561|ref|XP_006490383.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g55630-like [Citrus sinensis]
gi|557523790|gb|ESR35157.1| hypothetical protein
CICLE_v10004849mg [Citrus clementina]
Length = 487
Score = 194 bits (492), Expect = 1e-47
Identities = 93/159 (58%), Positives = 119/159 (74%)
Frame = +3
Query: 6 IEDFLNESWKSTNIDKVDEKNSTLYDSHGYWGAKGGFEGNVSARKGFVDEVKSDAARILE 185
IE+ L + W+S+N D N L+D + E S R+ F+D VK DA+R+LE
Sbjct: 42 IEETLTDIWESSNFDATMNGNGGLHDY------QRTAEAQFSIRRMFLDNVKFDASRVLE 95
Query: 186 VLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYANKNRCAKLGYKFFVWSGEQ 365
+L DGPGFDAK +LS+ G+RVS +LVREVL GIL+++NYA+K +CAKLGYKFFVWSG+Q
Sbjct: 96 ILQNDGPGFDAKLVLSESGIRVSEILVREVLSGILRSVNYADKTKCAKLGYKFFVWSGQQ 155
Query: 366 ENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
EN+RHT N YH++M IFA+ EEFKAMWRLVDEMIE G+P
Sbjct: 156 ENFRHTANSYHLIMKIFADCEEFKAMWRLVDEMIENGFP 194
>gb|EOY23190.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 488
Score = 192 bits (489), Expect = 3e-47
Identities = 97/158 (61%), Positives = 116/158 (73%)
Frame = +3
Query: 9 EDFLNESWKSTNIDKVDEKNSTLYDSHGYWGAKGGFEGNVSARKGFVDEVKSDAARILEV 188
E+ L +K ++ D V + N +D+ G + + G G + R GF + DA RILEV
Sbjct: 43 EEPLKRMYKGSSFDSVFDGN---HDNFGAYAS--GSVGRLPTRHGFFKSGRDDARRILEV 97
Query: 189 LHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYANKNRCAKLGYKFFVWSGEQE 368
L QDGPGFDAK LS++ +RVSG LVREVL+GILK INYANK RCAKLGYKFFVWSG+QE
Sbjct: 98 LQQDGPGFDAKAALSEMQMRVSGFLVREVLVGILKNINYANKTRCAKLGYKFFVWSGQQE 157
Query: 369 NYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
YRHT N YH++M IFAE EE+KAMWRLVDEMIE GYP
Sbjct: 158 TYRHTTNSYHLIMKIFAECEEYKAMWRLVDEMIENGYP 195
>emb|CBI22748.3| unnamed protein product [Vitis vinifera]
Length = 518
Score = 191 bits (486), Expect = 7e-47
Identities = 96/160 (60%), Positives = 119/160 (74%)
Frame = +3
Query: 3 RIEDFLNESWKSTNIDKVDEKNSTLYDSHGYWGAKGGFEGNVSARKGFVDEVKSDAARIL 182
RIE L+E+W +N D V ++N DS G+ E A KG+ D ++ DA+R+L
Sbjct: 71 RIEKPLSEAWGVSNFDPVSDENP---DSDNGIGSSSPAE--FLAGKGYFDNMRLDASRVL 125
Query: 183 EVLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYANKNRCAKLGYKFFVWSGE 362
++L QD PGF K L +L +RVSG LVREVLL ILKT+NY NK RCAKLGYKFF+WSG+
Sbjct: 126 QILQQDCPGFSTKAALDELQIRVSGGLVREVLLEILKTVNYTNKERCAKLGYKFFMWSGQ 185
Query: 363 QENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
QENYRHTVN YH++M IFAES+EFKAMWRLVDEMIE+G+P
Sbjct: 186 QENYRHTVNAYHLIMKIFAESDEFKAMWRLVDEMIEQGFP 225
>ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Vitis vinifera]
Length = 514
Score = 191 bits (486), Expect = 7e-47
Identities = 96/160 (60%), Positives = 119/160 (74%)
Frame = +3
Query: 3 RIEDFLNESWKSTNIDKVDEKNSTLYDSHGYWGAKGGFEGNVSARKGFVDEVKSDAARIL 182
RIE L+E+W +N D V ++N DS G+ E A KG+ D ++ DA+R+L
Sbjct: 67 RIEKPLSEAWGVSNFDPVSDENP---DSDNGIGSSSPAE--FLAGKGYFDNMRLDASRVL 121
Query: 183 EVLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYANKNRCAKLGYKFFVWSGE 362
++L QD PGF K L +L +RVSG LVREVLL ILKT+NY NK RCAKLGYKFF+WSG+
Sbjct: 122 QILQQDCPGFSTKAALDELQIRVSGGLVREVLLEILKTVNYTNKERCAKLGYKFFMWSGQ 181
Query: 363 QENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
QENYRHTVN YH++M IFAES+EFKAMWRLVDEMIE+G+P
Sbjct: 182 QENYRHTVNAYHLIMKIFAESDEFKAMWRLVDEMIEQGFP 221
>gb|EXC15982.1| hypothetical protein L484_015785 [Morus notabilis]
Length = 498
Score = 186 bits (473), Expect = 2e-45
Identities = 91/158 (57%), Positives = 112/158 (70%)
Frame = +3
Query: 9 EDFLNESWKSTNIDKVDEKNSTLYDSHGYWGAKGGFEGNVSARKGFVDEVKSDAARILEV 188
E+ L WKS+ D ++ S Y + GN S R+ F + + DA R+LEV
Sbjct: 54 EEPLKRMWKSSYFDSDMDEQSDFYSR------EMPARGNFSVRQSFFETARIDAGRVLEV 107
Query: 189 LHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYANKNRCAKLGYKFFVWSGEQE 368
L QDGPGFDAKP L +L +RVSGLLVR+VLLGIL I++ NK RCAKLG+KFF WSG+Q
Sbjct: 108 LQQDGPGFDAKPALDELNIRVSGLLVRKVLLGILSNISHTNKIRCAKLGFKFFTWSGQQG 167
Query: 369 NYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
NYRHT N YH+++ IFAE EEFKAMWRLVDEMIE+G+P
Sbjct: 168 NYRHTANSYHLLIKIFAECEEFKAMWRLVDEMIERGFP 205
>ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549906|gb|EEF51393.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 475
Score = 183 bits (465), Expect = 2e-44
Identities = 90/159 (56%), Positives = 112/159 (70%)
Frame = +3
Query: 6 IEDFLNESWKSTNIDKVDEKNSTLYDSHGYWGAKGGFEGNVSARKGFVDEVKSDAARILE 185
IE+ L WK+++ G G++ GN S RK F + V+ DAAR+L+
Sbjct: 42 IEEPLKRLWKNSDF--------------GSCGSENRDNGNYSQRKWFFENVRIDAARVLD 87
Query: 186 VLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYANKNRCAKLGYKFFVWSGEQ 365
+L QDGPGFDAK LS+L +RVSGLLVREVL GIL+ I NK RCAKLGYKFF+WS +Q
Sbjct: 88 ILRQDGPGFDAKAALSELDLRVSGLLVREVLAGILRNIGIDNKTRCAKLGYKFFIWSSQQ 147
Query: 366 ENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
ENYRHT N YH++M IFA+ EEFKAMWRL+DEM+E G+P
Sbjct: 148 ENYRHTANNYHLIMKIFADCEEFKAMWRLLDEMVENGFP 186
>gb|EMJ21260.1| hypothetical protein PRUPE_ppa025794mg [Prunus persica]
Length = 446
Score = 181 bits (458), Expect = 1e-43
Identities = 94/161 (58%), Positives = 111/161 (68%), Gaps = 2/161 (1%)
Frame = +3
Query: 6 IEDFLNESWKSTNIDKV-DEK-NSTLYDSHGYWGAKGGFEGNVSARKGFVDEVKSDAARI 179
+E+ L W+S++ D V DEK N Y++ S R+ F + K R+
Sbjct: 1 MEEPLKRIWRSSDFDSVLDEKQNVPEYENRP--------REYFSLRRSFFENAKIHTRRV 52
Query: 180 LEVLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYANKNRCAKLGYKFFVWSG 359
LEVL QDGPGFD K L +L + VSGLLVREVL ILK +NYA+K RCAKLGYKFFVWSG
Sbjct: 53 LEVLQQDGPGFDTKAALDELHIEVSGLLVREVLFKILKQVNYASKMRCAKLGYKFFVWSG 112
Query: 360 EQENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
+ ENYRHT N YH+MM IFA+ EEFKAMWRLVDEMIEKGYP
Sbjct: 113 QLENYRHTANTYHLMMKIFADCEEFKAMWRLVDEMIEKGYP 153
>ref|XP_004496572.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like isoform X1 [Cicer arietinum]
gi|502119305|ref|XP_004496573.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g55630-like isoform X2 [Cicer arietinum]
gi|502119308|ref|XP_004496574.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g55630-like isoform X3 [Cicer arietinum]
Length = 479
Score = 179 bits (453), Expect = 4e-43
Identities = 83/118 (70%), Positives = 97/118 (82%)
Frame = +3
Query: 129 SARKGFVDEVKSDAARILEVLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYA 308
S R+GF+D VK DA R+LE+L QDGPGFDA+ +L +L +R SG+LVREVLLGILK IN
Sbjct: 70 SLRQGFIDTVKVDAKRVLEILRQDGPGFDARLVLDELRIRPSGILVREVLLGILKNINSE 129
Query: 309 NKNRCAKLGYKFFVWSGEQENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
NK RCAKL YKFFVW +QE YRHT N YH++MNI+AE EEFKA+WRLVDEMIEK YP
Sbjct: 130 NKTRCAKLAYKFFVWCSQQEAYRHTANAYHLIMNIYAECEEFKAVWRLVDEMIEKDYP 187
>ref|XP_003556107.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like isoformX2 [Glycine max]
gi|571567703|ref|XP_006606113.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g55630-like isoform X3 [Glycine max]
gi|571567708|ref|XP_006606114.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g55630-like isoform X4 [Glycine max]
Length = 480
Score = 178 bits (451), Expect = 8e-43
Identities = 94/160 (58%), Positives = 111/160 (69%), Gaps = 3/160 (1%)
Frame = +3
Query: 12 DFLNESWKSTNID---KVDEKNSTLYDSHGYWGAKGGFEGNVSARKGFVDEVKSDAARIL 182
+F+ E K D VDE+ D WG K + S RKGF++ VK DA R+L
Sbjct: 36 EFIEEPLKKLGSDYDSTVDERLHVNED----WGFK---QKQFSLRKGFLETVKLDAKRVL 88
Query: 183 EVLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYANKNRCAKLGYKFFVWSGE 362
EVL QDGPG DA+ +L +L VR SGLLVREVL GILK IN NK RCAKL YKFFVW +
Sbjct: 89 EVLRQDGPGLDARLVLGELHVRPSGLLVREVLFGILKNINCQNKTRCAKLAYKFFVWCSQ 148
Query: 363 QENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
QE Y+HTVN YH++M+I+AE EEFKA+WRLVDEMIEKG P
Sbjct: 149 QEGYQHTVNAYHLVMSIYAECEEFKALWRLVDEMIEKGLP 188
>ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like isoform X1 [Glycine max]
gi|571484383|ref|XP_006589544.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g60050-like isoform X2 [Glycine max]
gi|571484385|ref|XP_006589545.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g60050-like isoform X3 [Glycine max]
Length = 480
Score = 177 bits (449), Expect = 1e-42
Identities = 93/160 (58%), Positives = 110/160 (68%), Gaps = 3/160 (1%)
Frame = +3
Query: 12 DFLNESWKSTNID---KVDEKNSTLYDSHGYWGAKGGFEGNVSARKGFVDEVKSDAARIL 182
+F+ E K D VDE+ D WG S RKGF++ VK DA R+L
Sbjct: 36 EFIEEPLKKLGPDYDTNVDERLHLKED----WGYN---RKQFSLRKGFLETVKLDAKRVL 88
Query: 183 EVLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYANKNRCAKLGYKFFVWSGE 362
EVL QDGPG DA+ +L +L VR+SGLLVREVL GILK IN NK RCAKL YKFFVW +
Sbjct: 89 EVLRQDGPGLDARLVLGELHVRLSGLLVREVLFGILKHINCENKTRCAKLAYKFFVWCSQ 148
Query: 363 QENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
QE Y+HTVN YH++MNI+AE EEFKA+WRLVDEM+EKG P
Sbjct: 149 QEGYQHTVNAYHLVMNIYAECEEFKALWRLVDEMVEKGLP 188
>gb|ESW15401.1| hypothetical protein PHAVU_007G069900g [Phaseolus vulgaris]
gi|561016598|gb|ESW15402.1| hypothetical protein
PHAVU_007G069900g [Phaseolus vulgaris]
gi|561016599|gb|ESW15403.1| hypothetical protein
PHAVU_007G069900g [Phaseolus vulgaris]
gi|561016600|gb|ESW15404.1| hypothetical protein
PHAVU_007G069900g [Phaseolus vulgaris]
gi|561016601|gb|ESW15405.1| hypothetical protein
PHAVU_007G069900g [Phaseolus vulgaris]
Length = 481
Score = 177 bits (448), Expect = 2e-42
Identities = 84/118 (71%), Positives = 96/118 (81%)
Frame = +3
Query: 129 SARKGFVDEVKSDAARILEVLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYA 308
S RKGF++ VK DA R+LEVL QDGPG DA+ +L +L V+ SGLLVREVL GILK IN
Sbjct: 73 SLRKGFLENVKLDAKRVLEVLRQDGPGLDARLVLGELHVKPSGLLVREVLFGILKIINSE 132
Query: 309 NKNRCAKLGYKFFVWSGEQENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
NK RCAKL YKFFVW +QE YRHTVN YH++MNI+AE EEFKA+WRLVDEMIEKG P
Sbjct: 133 NKTRCAKLAYKFFVWCSQQEGYRHTVNAYHLIMNIYAECEEFKALWRLVDEMIEKGLP 190
>ref|XP_003638369.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355504304|gb|AES85507.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 501
Score = 175 bits (444), Expect = 5e-42
Identities = 81/117 (69%), Positives = 96/117 (82%)
Frame = +3
Query: 129 SARKGFVDEVKSDAARILEVLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYA 308
S R+GF++ VK DA R LEVL QDGPG DA+ +L +LG+R SG+LVREVL GILK IN
Sbjct: 76 SLRQGFIESVKLDAKRALEVLRQDGPGLDARLVLEELGIRPSGILVREVLFGILKNINSE 135
Query: 309 NKNRCAKLGYKFFVWSGEQENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGY 479
NK RCAKL YKFFVW G+QE+YRHT N YH++MNI+AE +EFKA+WRLVDEMI KGY
Sbjct: 136 NKTRCAKLAYKFFVWCGQQEDYRHTANAYHLIMNIYAECKEFKALWRLVDEMIGKGY 192
>gb|EPS57950.1| hypothetical protein M569_16866, partial [Genlisea aurea]
Length = 400
Score = 167 bits (423), Expect = 1e-39
Identities = 77/108 (71%), Positives = 92/108 (85%)
Frame = +3
Query: 159 KSDAARILEVLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYANKNRCAKLGY 338
K+ A +IL+VLHQDGPG D K +LS+L V VSGL+VREVLLGILK I YANKNRCAKLGY
Sbjct: 1 KTAAQKILQVLHQDGPGIDMKLLLSELDVNVSGLVVREVLLGILKMITYANKNRCAKLGY 60
Query: 339 KFFVWSGEQENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
KFFVWS EQ+ ++HT++ YH MM++FAE E KAMWRL+DEM+EKGYP
Sbjct: 61 KFFVWSSEQQGFKHTLDAYHTMMSVFAECGELKAMWRLLDEMVEKGYP 108
>ref|XP_004308089.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Fragaria vesca subsp. vesca]
Length = 486
Score = 166 bits (421), Expect = 2e-39
Identities = 77/118 (65%), Positives = 94/118 (79%)
Frame = +3
Query: 129 SARKGFVDEVKSDAARILEVLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYA 308
S R+ F ++V+ +R+LEVL +D PGFDAK L +L V+VSG +VR VL ILK +NY
Sbjct: 76 SVRRSFFEDVRRCTSRVLEVLEKDEPGFDAKAALDELDVKVSGPVVRGVLFEILKVVNYG 135
Query: 309 NKNRCAKLGYKFFVWSGEQENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
NK RCAKLG+KFFVWSG++ENYRHT YH+MM IFA+ EEFKAMWRLVDEMIEKG+P
Sbjct: 136 NKMRCAKLGFKFFVWSGQKENYRHTAEAYHLMMKIFADCEEFKAMWRLVDEMIEKGHP 193
>ref|XP_002894516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297340358|gb|EFH70775.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 477
Score = 162 bits (409), Expect = 6e-38
Identities = 84/160 (52%), Positives = 108/160 (67%), Gaps = 1/160 (0%)
Frame = +3
Query: 6 IEDFLNESWKSTNID-KVDEKNSTLYDSHGYWGAKGGFEGNVSARKGFVDEVKSDAARIL 182
IE+ L SW+S+ +D DE + HG +S R+ F++ K A+R+L
Sbjct: 40 IEEPLKISWESSEMDCGFDE------EEHGE---------KISVRRRFMESAKLGASRVL 84
Query: 183 EVLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYANKNRCAKLGYKFFVWSGE 362
+ L QD PGF+ K L DL V +SGLLVREVL+GIL+T++Y NK RCAKL YKFFVW G
Sbjct: 85 DTLQQDCPGFNTKSALDDLNVTISGLLVREVLVGILRTLSYDNKTRCAKLAYKFFVWFGG 144
Query: 363 QENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
QEN+RHT N YH++M IFAE E+KAM RL+DEMI+ GYP
Sbjct: 145 QENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYP 184
>ref|XP_004157226.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Cucumis sativus]
Length = 476
Score = 160 bits (404), Expect = 2e-37
Identities = 74/118 (62%), Positives = 93/118 (78%)
Frame = +3
Query: 129 SARKGFVDEVKSDAARILEVLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYA 308
S R+ F+ + K DA +++E+L QDGPGFD L +L ++VSG+LV EVL GILK+ +
Sbjct: 66 SLRRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVL 125
Query: 309 NKNRCAKLGYKFFVWSGEQENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
NK +CAKLGYKFF+WSG ENYRHTVN YH++M IFAE EEFKAMWR++DEM EKGYP
Sbjct: 126 NKTQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYP 183
>ref|XP_004140840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Cucumis sativus]
Length = 476
Score = 159 bits (403), Expect = 3e-37
Identities = 74/118 (62%), Positives = 93/118 (78%)
Frame = +3
Query: 129 SARKGFVDEVKSDAARILEVLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYA 308
S R+ F+ + K DA +++E+L QDGPGFD L +L ++VSG+LV EVL GILK+ +
Sbjct: 66 SFRRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVL 125
Query: 309 NKNRCAKLGYKFFVWSGEQENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
NK +CAKLGYKFF+WSG ENYRHTVN YH++M IFAE EEFKAMWR++DEM EKGYP
Sbjct: 126 NKTQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYP 183
>ref|XP_006307100.1| hypothetical protein CARUB_v10008686mg [Capsella rubella]
gi|482575811|gb|EOA39998.1| hypothetical protein
CARUB_v10008686mg [Capsella rubella]
Length = 580
Score = 159 bits (402), Expect = 4e-37
Identities = 79/159 (49%), Positives = 106/159 (66%)
Frame = +3
Query: 6 IEDFLNESWKSTNIDKVDEKNSTLYDSHGYWGAKGGFEGNVSARKGFVDEVKSDAARILE 185
IE+ + +W+S+ +D EK + +S R+ F+D K A+R+L+
Sbjct: 143 IEEPMKVTWESSEMDCGFEKEE--------------HDEKISIRRRFLDSAKLGASRVLD 188
Query: 186 VLHQDGPGFDAKPILSDLGVRVSGLLVREVLLGILKTINYANKNRCAKLGYKFFVWSGEQ 365
L QD PGF+ K L +L V +SGLLVREVL+GIL+T++Y NK RCAKL YKFFVW G Q
Sbjct: 189 TLQQDCPGFNTKSALDELDVTISGLLVREVLVGILRTLSYDNKTRCAKLAYKFFVWCGAQ 248
Query: 366 ENYRHTVNVYHMMMNIFAESEEFKAMWRLVDEMIEKGYP 482
E++RHT N YH++M IFAE E+KAM RL+DEMI+ GYP
Sbjct: 249 ESFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYP 287