BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00033719
         (414 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY09326.1| Mitochondrial RNAediting factor 1 [Theobroma cacao]    119   4e-25
ref|XP_006493918.1| PREDICTED: putative pentatricopeptide repeat...   115   6e-24
gb|EPS65002.1| hypothetical protein M569_09774, partial [Genlise...   115   8e-24
ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   111   9e-23
ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat...   111   9e-23
ref|XP_004234835.1| PREDICTED: putative pentatricopeptide repeat...   108   7e-22
ref|XP_002322703.2| hypothetical protein POPTR_0016s05390g [Popu...   107   2e-21
ref|XP_006349560.1| PREDICTED: putative pentatricopeptide repeat...   106   3e-21
ref|XP_003625160.1| Pentatricopeptide repeat-containing protein ...    94   2e-17
ref|XP_004493520.1| PREDICTED: putative pentatricopeptide repeat...    94   2e-17
ref|XP_004301443.1| PREDICTED: putative pentatricopeptide repeat...    94   2e-17
gb|EXB53136.1| hypothetical protein L484_006956 [Morus notabilis]      89   5e-16
ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat...    80   3e-13
gb|ESW34235.1| hypothetical protein PHAVU_001G135800g [Phaseolus...    80   4e-13
ref|NP_200075.1| pentatricopeptide repeat protein MEF1 [Arabidop...    80   4e-13
ref|XP_002864185.1| pentatricopeptide repeat-containing protein ...    80   4e-13
ref|XP_006280222.1| hypothetical protein CARUB_v10026131mg [Caps...    78   1e-12

>gb|EOY09326.1| Mitochondrial RNAediting factor 1 [Theobroma cacao]
          Length = 595

 Score =  119 bits (298), Expect = 4e-25
 Identities = 56/85 (65%), Positives = 67/85 (78%)
 Frame = +3

Query: 159 PQNSLNQQSFELNHRVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYS 338
           PQN LNQ SFE N+R +CN L+  T  ++L KG  LHAH+IK+GLQTIPLI HHL+NFYS
Sbjct: 9   PQNPLNQNSFEQNYRNICNVLLSLTHSRSLPKGLQLHAHIIKAGLQTIPLISHHLLNFYS 68

Query: 339 KLQLPYWSEQIFRETLVKSSTTWSS 413
           K QLP +S QIF ET ++SSTTWSS
Sbjct: 69  KTQLPLFSRQIFFETPIRSSTTWSS 93


>ref|XP_006493918.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Citrus sinensis]
          Length = 610

 Score =  115 bits (288), Expect = 6e-24
 Identities = 53/85 (62%), Positives = 64/85 (75%)
 Frame = +3

Query: 159 PQNSLNQQSFELNHRVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYS 338
           PQN LNQ SFEL +R +C  L+  T  +NL KG  LHAH+IKSGLQTIPL+ HHLINFYS
Sbjct: 24  PQNPLNQSSFELTYREICTLLLSLTYARNLTKGLQLHAHIIKSGLQTIPLVSHHLINFYS 83

Query: 339 KLQLPYWSEQIFRETLVKSSTTWSS 413
           K Q P ++ Q+F E  +KS+TTWSS
Sbjct: 84  KTQRPLFARQVFDEATLKSATTWSS 108


>gb|EPS65002.1| hypothetical protein M569_09774, partial [Genlisea aurea]
          Length = 575

 Score =  115 bits (287), Expect = 8e-24
 Identities = 53/84 (63%), Positives = 66/84 (78%)
 Frame = +3

Query: 162 QNSLNQQSFELNHRVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYSK 341
           QN  N  +FE N R++CN LVD    +NL +GQSLH HV+KSG+Q IP +CHHLINFYSK
Sbjct: 1   QNFSNHINFESNCRLICNDLVDCISRRNLRRGQSLHGHVVKSGIQLIPQVCHHLINFYSK 60

Query: 342 LQLPYWSEQIFRETLVKSSTTWSS 413
           ++LPY SEQ+F E+ +KSSTTWSS
Sbjct: 61  VELPYRSEQVFIESQLKSSTTWSS 84


>ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  111 bits (278), Expect = 9e-23
 Identities = 53/84 (63%), Positives = 65/84 (77%)
 Frame = +3

Query: 162 QNSLNQQSFELNHRVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYSK 341
           QN LNQ SFE N+R +CN L+ FTR ++L +G  LHAH++K GLQTIPL+ H+LIN YSK
Sbjct: 13  QNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSK 72

Query: 342 LQLPYWSEQIFRETLVKSSTTWSS 413
            QLP +S Q+F ET  KSSTTWSS
Sbjct: 73  TQLPLFSLQVFDETPKKSSTTWSS 96


>ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  111 bits (278), Expect = 9e-23
 Identities = 53/84 (63%), Positives = 65/84 (77%)
 Frame = +3

Query: 162 QNSLNQQSFELNHRVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYSK 341
           QN LNQ SFE N+R +CN L+ FTR ++L +G  LHAH++K GLQTIPL+ H+LIN YSK
Sbjct: 13  QNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSK 72

Query: 342 LQLPYWSEQIFRETLVKSSTTWSS 413
            QLP +S Q+F ET  KSSTTWSS
Sbjct: 73  TQLPLFSLQVFDETPKKSSTTWSS 96


>ref|XP_004234835.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Solanum lycopersicum]
          Length = 596

 Score =  108 bits (270), Expect = 7e-22
 Identities = 51/84 (60%), Positives = 64/84 (76%)
 Frame = +3

Query: 162 QNSLNQQSFELNHRVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYSK 341
           Q +   QSF LN+R +CN+L+  T+ ++L KG +LHAH+IKSG+Q IPL+ HHLINFYSK
Sbjct: 11  QETTFSQSFNLNYRAICNNLLSLTQSRSLPKGLALHAHIIKSGIQIIPLVSHHLINFYSK 70

Query: 342 LQLPYWSEQIFRETLVKSSTTWSS 413
           LQ P  S  +F ETL KSSTTWSS
Sbjct: 71  LQRPIDSTLVFDETLSKSSTTWSS 94


>ref|XP_002322703.2| hypothetical protein POPTR_0016s05390g [Populus trichocarpa]
           gi|550320891|gb|EEF04464.2| hypothetical protein
           POPTR_0016s05390g [Populus trichocarpa]
          Length = 627

 Score =  107 bits (267), Expect = 2e-21
 Identities = 51/85 (60%), Positives = 64/85 (75%)
 Frame = +3

Query: 159 PQNSLNQQSFELNHRVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYS 338
           PQNS N+   E  +  +C+ L+  TR ++LLKGQ +HAH+IKSGLQ IPL+CH+LINFYS
Sbjct: 41  PQNSPNRFCSEKKYGHICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYS 100

Query: 339 KLQLPYWSEQIFRETLVKSSTTWSS 413
           K QLP  S Q+F E+  KSSTTWSS
Sbjct: 101 KTQLPLLSSQVFEESERKSSTTWSS 125


>ref|XP_006349560.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Solanum tuberosum]
          Length = 596

 Score =  106 bits (265), Expect = 3e-21
 Identities = 50/84 (59%), Positives = 63/84 (75%)
 Frame = +3

Query: 162 QNSLNQQSFELNHRVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYSK 341
           Q +   QSF LN+R +CN+L+  T+ ++L KG +LHAH+IKSG+Q IPL+ HHLINFYSK
Sbjct: 11  QQTTFSQSFNLNYRAICNNLLSLTQSRSLPKGLALHAHIIKSGIQIIPLVSHHLINFYSK 70

Query: 342 LQLPYWSEQIFRETLVKSSTTWSS 413
           LQ P  S  +F ET  KSSTTWSS
Sbjct: 71  LQRPIDSTLVFHETHSKSSTTWSS 94


>ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360204|gb|ABN08217.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355500175|gb|AES81378.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 596

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 48/83 (57%), Positives = 59/83 (71%)
 Frame = +3

Query: 165 NSLNQQSFELNHRVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYSKL 344
           +S NQQ     +R +CN L+  T  ++L KG  LHAH+IK GLQTIPL+ HHLINFYSK 
Sbjct: 12  HSFNQQPL---YRNLCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKT 68

Query: 345 QLPYWSEQIFRETLVKSSTTWSS 413
            LPY S QIF ++  KS+TTWSS
Sbjct: 69  HLPYSSLQIFHDSPHKSATTWSS 91


>ref|XP_004493520.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cicer arietinum]
          Length = 594

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 47/85 (55%), Positives = 58/85 (68%)
 Frame = +3

Query: 159 PQNSLNQQSFELNHRVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYS 338
           P   LN+Q     +R +CN L+  T  ++L KG  LHAH++K GLQTIPL+ HHLINFYS
Sbjct: 9   PLKLLNEQPL---YRKICNTLLSLTYSRSLPKGLQLHAHILKLGLQTIPLLSHHLINFYS 65

Query: 339 KLQLPYWSEQIFRETLVKSSTTWSS 413
           K  LPY S QIF ++  KS TTWSS
Sbjct: 66  KTHLPYSSLQIFNDSPHKSPTTWSS 90


>ref|XP_004301443.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Fragaria vesca subsp. vesca]
          Length = 590

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/82 (59%), Positives = 57/82 (69%)
 Frame = +3

Query: 168 SLNQQSFELNHRVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYSKLQ 347
           SLN      +H  +CN L+  T  + L KG  LHAHVIKSGLQ+IPL+ HHLINFYSK Q
Sbjct: 9   SLNPNPNHSSH--ICNLLLSLTHARALPKGLQLHAHVIKSGLQSIPLVSHHLINFYSKNQ 66

Query: 348 LPYWSEQIFRETLVKSSTTWSS 413
           LP +S QIF+    KSSTTWSS
Sbjct: 67  LPLFSRQIFQHFPHKSSTTWSS 88


>gb|EXB53136.1| hypothetical protein L484_006956 [Morus notabilis]
          Length = 616

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 42/73 (57%), Positives = 55/73 (75%)
 Frame = +3

Query: 195 NHRVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYSKLQLPYWSEQIF 374
           +++ +C+ L+  TR ++L KG  LHA +IKSG+Q+IPL+ HHLINFYSK Q P  S Q+F
Sbjct: 42  DYKQICDLLLSQTRSRSLPKGLQLHAQIIKSGIQSIPLVSHHLINFYSKTQFPLHSLQVF 101

Query: 375 RETLVKSSTTWSS 413
            ET  KSSTTWSS
Sbjct: 102 DETPHKSSTTWSS 114


>ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Glycine max]
          Length = 582

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 39/71 (54%), Positives = 48/71 (67%)
 Frame = +3

Query: 201 RVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYSKLQLPYWSEQIFRE 380
           R +C  LV FT  ++L KG  LH  VIK G + IPL+CHHLINFYSK  LP+ S ++F  
Sbjct: 8   RDICKVLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDS 67

Query: 381 TLVKSSTTWSS 413
              KS+TTWSS
Sbjct: 68  FPHKSATTWSS 78


>gb|ESW34235.1| hypothetical protein PHAVU_001G135800g [Phaseolus vulgaris]
          Length = 583

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 37/71 (52%), Positives = 48/71 (67%)
 Frame = +3

Query: 201 RVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYSKLQLPYWSEQIFRE 380
           R +C  LV  T  ++L KG  LHA+VIK G + +PL+CHH INFYSK  LP+ S ++F  
Sbjct: 9   RDICKVLVCLTHSRSLPKGLQLHAYVIKLGFEALPLVCHHFINFYSKTNLPHSSHKLFDS 68

Query: 381 TLVKSSTTWSS 413
              KS+TTWSS
Sbjct: 69  FPHKSATTWSS 79


>ref|NP_200075.1| pentatricopeptide repeat protein MEF1 [Arabidopsis thaliana]
           gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g52630 gi|8953718|dbj|BAA98081.1|
           selenium-binding protein-like [Arabidopsis thaliana]
           gi|332008860|gb|AED96243.1| pentatricopeptide repeat
           protein MEF1 [Arabidopsis thaliana]
          Length = 588

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 39/85 (45%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
 Frame = +3

Query: 168 SLNQQSFEL---NHRVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYS 338
           +LN  +F +   N+  +C+ L+   R ++ +KG  LH +V+KSGL  IPL+ ++LINFYS
Sbjct: 2   ALNSSAFFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYS 61

Query: 339 KLQLPYWSEQIFRETLVKSSTTWSS 413
           K QLP+ S + F ++  KSSTTWSS
Sbjct: 62  KSQLPFDSRRAFEDSPQKSSTTWSS 86


>ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297310020|gb|EFH40444.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 588

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 37/85 (43%), Positives = 59/85 (69%), Gaps = 3/85 (3%)
 Frame = +3

Query: 168 SLNQQSFEL---NHRVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYS 338
           +LN  +F +   N+  +C+ L+   R ++++KG  LH +++KSGL  IPL+ ++LINFYS
Sbjct: 2   ALNSSAFFVPCHNYNQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYS 61

Query: 339 KLQLPYWSEQIFRETLVKSSTTWSS 413
           K QLP+ S + F ++  KS+TTWSS
Sbjct: 62  KSQLPFDSRRAFEDSPQKSATTWSS 86


>ref|XP_006280222.1| hypothetical protein CARUB_v10026131mg [Capsella rubella]
           gi|482548926|gb|EOA13120.1| hypothetical protein
           CARUB_v10026131mg [Capsella rubella]
          Length = 588

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/85 (44%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
 Frame = +3

Query: 168 SLNQQSFEL---NHRVVCNHLVDFTRGKNLLKGQSLHAHVIKSGLQTIPLICHHLINFYS 338
           +LN  +F +   N+  +C+ L+   R ++ +KG  LH +V+KSGL  IPL+ ++LINFYS
Sbjct: 2   ALNSSAFFVPCHNYNQICDLLLSSARTRSTVKGLQLHGYVVKSGLSLIPLVANNLINFYS 61

Query: 339 KLQLPYWSEQIFRETLVKSSTTWSS 413
           K QLP+ S + F ++  KS+TTWSS
Sbjct: 62  KSQLPFDSRRAFEDSPQKSATTWSS 86