BLASTX nr result

ID: Rehmannia23_contig00033606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00033606
         (405 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004236502.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...    72   7e-11
gb|EPS62963.1| hypothetical protein M569_11827, partial [Genlise...    71   2e-10
ref|XP_006345206.1| PREDICTED: putative ATP-dependent helicase H...    70   3e-10
ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...    62   8e-08
emb|CBI15349.3| unnamed protein product [Vitis vinifera]               62   8e-08
ref|XP_006582030.1| PREDICTED: putative ATP-dependent helicase H...    61   1e-07
gb|EOY22146.1| Nucleic acid binding,ATP-dependent helicases,ATP ...    57   2e-06
ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ...    57   2e-06

>ref|XP_004236502.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Solanum lycopersicum]
          Length = 1225

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
 Frame = +2

Query: 2   FLVIVPFVKKDRQHRVEASETPSEGPNPDVKFAAELAESAWSDLRQDLSSYQEISNHEN- 178
           FLV+VP+ KKDRQ   E +ETP+    P      + AE+AWSD+ +DLS    IS +EN 
Sbjct: 73  FLVLVPYTKKDRQQN-EKTETPASSSVPVGGSTLKEAETAWSDMMEDLSYLSSISRNENQ 131

Query: 179 ----LAEAGFKSMNPENAHDKGTSSRTTKSKNELIKGKEKGTPYDVLLSILQTSGDNLFD 346
               L E  ++  + +N       S   K K  +   K +G   +++LSIL++S +++ D
Sbjct: 132 DEVLLDETRYRDSDGQNCSVPMNFSSQVKRKRSIKDDKMEGHADELVLSILKSSSNDMDD 191

Query: 347 EQILKKFIEFMDCSSCLSN 403
           E+  K F++ +   +C ++
Sbjct: 192 EK-AKIFVQVLASINCFTD 209


>gb|EPS62963.1| hypothetical protein M569_11827, partial [Genlisea aurea]
          Length = 316

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 48/132 (36%), Positives = 67/132 (50%)
 Frame = +2

Query: 2   FLVIVPFVKKDRQHRVEASETPSEGPNPDVKFAAELAESAWSDLRQDLSSYQEISNHENL 181
           FL +VPFVKK  +    A  +            ++LA+SAWSDL +DLSS +E S+ +N 
Sbjct: 67  FLALVPFVKKSSKQTQNAEPSEVGKLRSHEALESKLADSAWSDLMEDLSSLRESSDRDNA 126

Query: 182 AEAGFKSMNPENAHDKGTSSRTTKSKNELIKGKEKGTPYDVLLSILQTSGDNLFDEQILK 361
            ++G K+ N      +G      KS     K K++    D LLSIL  S  +  D   ++
Sbjct: 127 FQSGLKATN------QGAFPAVLKS-----KVKKELHSSDALLSILLPSSGDAVDAHAVE 175

Query: 362 KFIEFMDCSSCL 397
           K IE M  SSCL
Sbjct: 176 KLIELMHSSSCL 187


>ref|XP_006345206.1| PREDICTED: putative ATP-dependent helicase HRQ1-like [Solanum
           tuberosum]
          Length = 1276

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
 Frame = +2

Query: 2   FLVIVPFVKKDRQHRVEASETPSEGPNPDVKFAAELAESAWSDLRQDLSSYQEISNHEN- 178
           FLV+VP+ KKDRQ   + +ETP+    P      + AE+AWSD+ +DLS    IS +EN 
Sbjct: 127 FLVLVPYTKKDRQQN-KKTETPASSSVPVGGSTLKEAETAWSDMMEDLSYLSSISRNENQ 185

Query: 179 ----LAEAGFKSMNPENAHDKGTSSRTTKSKNELIKGKEKGTPYDVLLSILQTSGDNLFD 346
               L E  ++  +  N       S   K K  +   K +G   +++LSIL++S +++ D
Sbjct: 186 NKVLLDETRYRDSDGHNCSVPMNCSSQVKRKRSIKDDKMEGHADELVLSILKSSSNDMDD 245

Query: 347 EQILKKFIEFMDCSSCLSN 403
           E+  K F++ +   +C ++
Sbjct: 246 EK-AKIFVQVLASINCFTD 263


>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Vitis vinifera]
          Length = 1231

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 8/140 (5%)
 Frame = +2

Query: 2   FLVIVPFVKKDRQHRVEA--SETPSEGPNPDVKFAAELAESAWSDLRQDLSSYQEISNHE 175
           F+V+VPF KK RQ    A  SE P++ P       +  A+SAWSD+ QDL +   +SN+E
Sbjct: 57  FMVLVPFTKKVRQCNQSATTSEVPNQSP------VSNFADSAWSDMMQDLRTLSNMSNNE 110

Query: 176 NLAEAGFKSMN-----PENAHDKGTSSRTTKSKNELIKG-KEKGTPYDVLLSILQTSGDN 337
           N  +  F S +          ++ +++ T + K +   G K++G+  D++LS+L++    
Sbjct: 111 N--QTNFDSGSVIEGVRNELMEEASATYTLERKRKKFHGDKQEGSSDDLILSLLKSPCKI 168

Query: 338 LFDEQILKKFIEFMDCSSCL 397
             D+Q  +  I  ++  +CL
Sbjct: 169 FLDKQNCEILIRVLESVNCL 188


>emb|CBI15349.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 8/140 (5%)
 Frame = +2

Query: 2   FLVIVPFVKKDRQHRVEA--SETPSEGPNPDVKFAAELAESAWSDLRQDLSSYQEISNHE 175
           F+V+VPF KK RQ    A  SE P++ P       +  A+SAWSD+ QDL +   +SN+E
Sbjct: 76  FMVLVPFTKKVRQCNQSATTSEVPNQSP------VSNFADSAWSDMMQDLRTLSNMSNNE 129

Query: 176 NLAEAGFKSMN-----PENAHDKGTSSRTTKSKNELIKG-KEKGTPYDVLLSILQTSGDN 337
           N  +  F S +          ++ +++ T + K +   G K++G+  D++LS+L++    
Sbjct: 130 N--QTNFDSGSVIEGVRNELMEEASATYTLERKRKKFHGDKQEGSSDDLILSLLKSPCKI 187

Query: 338 LFDEQILKKFIEFMDCSSCL 397
             D+Q  +  I  ++  +CL
Sbjct: 188 FLDKQNCEILIRVLESVNCL 207


>ref|XP_006582030.1| PREDICTED: putative ATP-dependent helicase HRQ1-like isoform X1
           [Glycine max]
          Length = 1215

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
 Frame = +2

Query: 2   FLVIVPFVKKDRQ-HRVEASETPSEGPNPDVKFAAELAESAWSDLRQDLSSYQEISNHEN 178
           FLV+VPF KK+++  R   S+T S  P      +  LA+S WS +++DLS   +    EN
Sbjct: 75  FLVLVPFAKKEKEPSRTHESDTVSNVPT-----STTLADSTWSTIKEDLSLLHDDDTTEN 129

Query: 179 LAEAGFKSMNPENAHDKGTSSRTTKSKNELIKGKEKGTPYDVLLSILQTSGDNLFDEQIL 358
                    N  N+  K      T+S   L   K+   PY ++L  LQ S + +  E   
Sbjct: 130 CD-------NASNSESKKEEMLQTQSIAGLGSEKQIELPYHLILDTLQDSSEGVLGEHNC 182

Query: 359 KKFIEFMDCSSCLSN 403
           + F++ ++  +CLS+
Sbjct: 183 EVFVKVLESVNCLSD 197


>gb|EOY22146.1| Nucleic acid binding,ATP-dependent helicases,ATP
           binding,helicases,ATP-dependent helicases isoform 1
           [Theobroma cacao]
          Length = 1208

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
 Frame = +2

Query: 2   FLVIVPFVKKDRQHRVEASETPSEGPNPDVKFAAELAESAWSDLRQDLSSYQEISNHENL 181
           F V++PF KKD+       E PS   N     A   A+S +SD+ Q+ SS ++ S +   
Sbjct: 69  FFVLIPFTKKDKPR----IEKPSFSNNAST--ATSFADSTYSDMMQEFSSLRDESGN--- 119

Query: 182 AEAGFKSMNPENAHDKGTSSR-TTKSKNELIKGKEKGTPYDVLLSILQTSGDNLFDEQIL 358
              G  + N  N + K       T  ++E    K++G  YD L ++L++S  +LF+++  
Sbjct: 120 --FGEDNSNNNNVYFKSKRKEGVTIDRDE----KKEGRAYDFLWNVLRSSDGDLFEKKNC 173

Query: 359 KKFIEFMDCSSCLSN 403
            KF+E +   +CLS+
Sbjct: 174 DKFVEVLRSVNCLSS 188


>ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 1189

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
 Frame = +2

Query: 2   FLVIVPFVKKDRQHRVEASETPSEGPNPDVKFAAEL---------AESAWSDLRQDLSSY 154
           FLV++PF+KK+R           + PNPD  F+  L         A+S +SD+ Q+ SS+
Sbjct: 57  FLVLIPFIKKERP----------KAPNPD--FSTNLPKQTSNSSYADSVYSDMMQEFSSF 104

Query: 155 QEISNHENLAEAGFKSMNPENAHDKGTSSRTTKSKNELIKGKEK--GTPYDVLLSILQTS 328
            + S+  NL+        P N     T+S+  K K       E   G  Y  L S+ Q+S
Sbjct: 105 SKESS--NLS-------TPPNYEPDSTNSQGHKRKRVFKYRYEDDGGGQYAFLWSVFQSS 155

Query: 329 GDNLFDEQILKKFIEFMDCSSCLSN 403
             N+ D+   +KF+E ++  +CL++
Sbjct: 156 NKNILDDSNCEKFVEVLESLNCLTS 180


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