BLASTX nr result
ID: Rehmannia23_contig00033321
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00033321
(528 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 232 3e-59
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 231 6e-59
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera] 223 2e-56
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc... 214 9e-54
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 213 2e-53
gb|AAU90262.1| integrase core domain containing protein [Oryza s... 212 5e-53
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 209 4e-52
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 207 1e-51
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 207 1e-51
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 207 2e-51
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 206 3e-51
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 206 3e-51
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana] 206 3e-51
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana] 206 3e-51
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 206 3e-51
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|... 206 3e-51
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 206 3e-51
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana] 206 3e-51
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops... 206 3e-51
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 205 6e-51
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 232 bits (592), Expect = 3e-59
Identities = 107/175 (61%), Positives = 132/175 (75%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+SF D SRYTW+Y LK KS T +AFL FK AE Q ++K Q+D G E++ L
Sbjct: 396 YYVSFXDAYSRYTWVYXLKTKSQTREAFLMFKAQAELQFGCKLKTFQTDWGGEFRSLKTY 455
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
QNGIIHR+SCP+T +QNG+ ERKHRHI+E L+LLA +S+P YW DA ++AVFLINR
Sbjct: 456 FEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVFLINR 515
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
+P++VLK K PYE KPNYS LKVFGCLC+PHLRPYNKHKL+FRS+P F+G
Sbjct: 516 LPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLG 570
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 231 bits (590), Expect = 6e-59
Identities = 107/175 (61%), Positives = 134/175 (76%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YYI FID SR+TWIY+LK+KS+ + FLHFK+ E Q +IKA+QSD G EY+
Sbjct: 584 YYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLGHKIKAVQSDWGGEYRSFTQY 643
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
L NGIIHRISCPYT +QNGLAERKHRHI+E ++LLA +S+P YWD+A ++V+LINR
Sbjct: 644 LTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINR 703
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
+P+ VLK KSP EV KP+YS LKVFGC+CYP+LRP+N HKL+FRS P F+G
Sbjct: 704 LPTPVLKNKSPLEVLFHQKPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLG 758
>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
Length = 1242
Score = 223 bits (568), Expect = 2e-56
Identities = 104/175 (59%), Positives = 128/175 (73%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+SF D SRYT +Y LK KS T +AFL FK AE Q ++ Q D G E++ L
Sbjct: 642 YYVSFXDAYSRYTXVYFLKTKSQTREAFLMFKAQAELQFGCKLXTFQXDWGGEFRSLKTY 701
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
QNGIIHR+SCP+T +QNG+ ERKHRHI+E L+LLA +S+P YW DA ++ VFLINR
Sbjct: 702 FEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTXVFLINR 761
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
+P++VLK K PYE KPNYS LKVFGCLC+PHLRPYNKHKL+FRS+P F+G
Sbjct: 762 LPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLG 816
>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1016
Score = 214 bits (545), Expect = 9e-54
Identities = 98/175 (56%), Positives = 125/175 (71%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+SFID S++TWIYLLKNKS+ F F+ E N +I ++Q+D G EY+ LH
Sbjct: 146 YYVSFIDDFSKFTWIYLLKNKSEVFSKFHEFQQRVERLFNRKIISMQTDWGGEYEKLHSF 205
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
+ GI H +SCPY QQNG AERKHRHI+E L+LLAH+SVP +WD+A +A +LINR
Sbjct: 206 FTKIGISHHVSCPYAHQQNGSAERKHRHIVEVGLALLAHASVPLKFWDEAFLAATYLINR 265
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
+PSKV++Y +P E KPNYS L+ FGC C+P+LRPYNK KLEFRS VF+G
Sbjct: 266 LPSKVIQYSAPLERLLDQKPNYSALRTFGCACWPNLRPYNKRKLEFRSKQCVFLG 320
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 213 bits (543), Expect = 2e-53
Identities = 100/175 (57%), Positives = 128/175 (73%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+SFID S++TWIYLLK KS+ F F++L E N +I A+Q+D G EY+ LH
Sbjct: 533 YYVSFIDDYSKFTWIYLLKYKSEVFDKFHEFQSLVERLFNRKIVAMQTDWGGEYQKLHSF 592
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
+ GI H +SCP+T QQNG AERKHRHI+E L+LLA+SS+P +W +A SAV+LINR
Sbjct: 593 FNKVGITHHVSCPHTHQQNGSAERKHRHIVEVGLALLAYSSMPLKFWGEAFLSAVYLINR 652
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
PS+VL SP E GHKP+Y+ L+VFGC C+P+LRPYNKHKL+FRST F+G
Sbjct: 653 TPSRVLHDVSPLERLLGHKPDYNALRVFGCACWPNLRPYNKHKLQFRSTTCTFLG 707
>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
Group] gi|108710062|gb|ABF97857.1| retrotransposon
protein, putative, Ty1-copia subclass, expressed [Oryza
sativa Japonica Group]
Length = 1021
Score = 212 bits (539), Expect = 5e-53
Identities = 98/175 (56%), Positives = 125/175 (71%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+SFID S++TWIYLLK KS+ + F F+ L E N +I A+QSD G EY+ L+ I
Sbjct: 450 YYVSFIDDFSKFTWIYLLKKKSEVLQKFSEFQQLVERLFNRKIIAMQSDWGGEYEKLNAI 509
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
+ GI H +SCPY QQNG AERKHRHI+E LSLLAH+S+P +WD+A +A +LINR
Sbjct: 510 FTKIGITHHVSCPYAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLTATYLINR 569
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
PSKV++Y +P E KPNYS L+ FGC C+P+LRPYN KL+FRS VF+G
Sbjct: 570 TPSKVIQYSTPLERLLNQKPNYSSLRTFGCACWPNLRPYNNRKLQFRSKQCVFLG 624
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 209 bits (531), Expect = 4e-52
Identities = 97/175 (55%), Positives = 127/175 (72%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+SFID S++TWIYLL++KSD K+F F++L E +I A QSD G EY+ L+
Sbjct: 535 YYVSFIDDYSKFTWIYLLRHKSDVYKSFCEFQHLVERMFGRKIIAFQSDWGGEYEKLNAH 594
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
GI H++SCP+T QQNG AERKHRHI+E L+LLA SS+P YWD A +AV+LINR
Sbjct: 595 FKTIGIHHQVSCPHTHQQNGAAERKHRHIVEVGLALLAQSSMPLKYWDHAFLAAVYLINR 654
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
PSK + + +P TG P+YS L++FGC C+P+LRPYN+HKL+FRST VF+G
Sbjct: 655 TPSKTIAHDTPLHKLTGATPDYSSLRIFGCACWPNLRPYNQHKLQFRSTRCVFLG 709
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 207 bits (527), Expect = 1e-51
Identities = 94/175 (53%), Positives = 128/175 (73%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
Y+I F+D SR++WIY L +K F+ FK+L ENQ N+RI+ ++SD G E+K
Sbjct: 598 YFILFVDDFSRFSWIYPLHSKDQALSVFIKFKSLVENQFNSRIQCLRSDNGGEFKAFSSY 657
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
LA +GI + SCPYTP+QNG AERK RHIIET L+LLA +S+P +W A +A+FLINR
Sbjct: 658 LATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTAIFLINR 717
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
+P+KVL Y+SP+++ G PNY K+FGCLCYP++RPYNK+KL +RS+ VF+G
Sbjct: 718 LPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLG 772
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 207 bits (527), Expect = 1e-51
Identities = 96/175 (54%), Positives = 126/175 (72%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+SFID S++TWIYLLK KS+ F F+ L E +I A+Q+D G EY+ LHD
Sbjct: 526 YYVSFIDDFSKFTWIYLLKQKSEVFHKFHEFQQLVERIFYRKIIAMQTDWGGEYEKLHDF 585
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
+ GI H +SCP+T QQNG AERKHRHI+E LSLLAH+S+P +WD+A +A +LINR
Sbjct: 586 FTKIGISHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFIAATYLINR 645
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
PSKV++Y++P E KP+Y+ L+VFGC C+P+LRPYN KL+FRS VF+G
Sbjct: 646 TPSKVIQYETPLEHLFHQKPSYTSLRVFGCACWPNLRPYNARKLQFRSKQCVFLG 700
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 207 bits (526), Expect = 2e-51
Identities = 93/175 (53%), Positives = 120/175 (68%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
Y+I F+D SRYTW+YLL++K F FK ENQ + +IK +QSD G E++
Sbjct: 512 YFILFVDDYSRYTWLYLLQSKDQALPIFKQFKLQVENQFDAKIKCLQSDNGGEFRSFMSF 571
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
L ++GI+HR SCPY QNG ERKHRH++ET L+LLAH+ +P +W A +A FLINR
Sbjct: 572 LQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINR 631
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
MPSKVL+ SPY P+Y FL+VFGCLCYP +RPYN HKL++RS VF+G
Sbjct: 632 MPSKVLQNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLG 686
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 206 bits (523), Expect = 3e-51
Identities = 94/175 (53%), Positives = 126/175 (72%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+ F+DH +RYTW+Y LK KS F+ FK+L EN+ TRI + SD G E+ L D
Sbjct: 542 YYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDY 601
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
L+Q+GI H S P+TP+ NGL+ERKHRHI+E L+LL+H+SVP++YW A + AV+LINR
Sbjct: 602 LSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINR 661
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
+P+ +L+ +SP++ G PNY LKVFGC CYP LRPYN+HKLE +S F+G
Sbjct: 662 LPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMG 716
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 206 bits (523), Expect = 3e-51
Identities = 94/175 (53%), Positives = 126/175 (72%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+ F+DH +RYTW+Y LK KS F+ FK+L EN+ TRI + SD G E+ L D
Sbjct: 397 YYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDY 456
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
L+Q+GI H S P+TP+ NGL+ERKHRHI+E L+LL+H+SVP++YW A + AV+LINR
Sbjct: 457 LSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINR 516
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
+P+ +L+ +SP++ G PNY LKVFGC CYP LRPYN+HKLE +S F+G
Sbjct: 517 LPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMG 571
>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 206 bits (523), Expect = 3e-51
Identities = 94/175 (53%), Positives = 126/175 (72%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+ F+DH +RYTW+Y LK KS F+ FK+L EN+ TRI + SD G E+ L D
Sbjct: 542 YYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDY 601
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
L+Q+GI H S P+TP+ NGL+ERKHRHI+E L+LL+H+SVP++YW A + AV+LINR
Sbjct: 602 LSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINR 661
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
+P+ +L+ +SP++ G PNY LKVFGC CYP LRPYN+HKLE +S F+G
Sbjct: 662 LPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMG 716
>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 206 bits (523), Expect = 3e-51
Identities = 94/175 (53%), Positives = 126/175 (72%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+ F+DH +RYTW+Y LK KS F+ FK+L EN+ TRI + SD G E+ L D
Sbjct: 542 YYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDY 601
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
L+Q+GI H S P+TP+ NGL+ERKHRHI+E L+LL+H+SVP++YW A + AV+LINR
Sbjct: 602 LSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINR 661
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
+P+ +L+ +SP++ G PNY LKVFGC CYP LRPYN+HKLE +S F+G
Sbjct: 662 LPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMG 716
>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 206 bits (523), Expect = 3e-51
Identities = 94/175 (53%), Positives = 126/175 (72%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+ F+DH +RYTW+Y LK KS F+ FK+L EN+ TRI + SD G E+ L D
Sbjct: 542 YYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDY 601
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
L+Q+GI H S P+TP+ NGL+ERKHRHI+E L+LL+H+SVP++YW A + AV+LINR
Sbjct: 602 LSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINR 661
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
+P+ +L+ +SP++ G PNY LKVFGC CYP LRPYN+HKLE +S F+G
Sbjct: 662 LPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMG 716
>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 206 bits (523), Expect = 3e-51
Identities = 94/175 (53%), Positives = 126/175 (72%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+ F+DH +RYTW+Y LK KS F+ FK+L EN+ TRI + SD G E+ L D
Sbjct: 542 YYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDY 601
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
L+Q+GI H S P+TP+ NGL+ERKHRHI+E L+LL+H+SVP++YW A + AV+LINR
Sbjct: 602 LSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINR 661
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
+P+ +L+ +SP++ G PNY LKVFGC CYP LRPYN+HKLE +S F+G
Sbjct: 662 LPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMG 716
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 206 bits (523), Expect = 3e-51
Identities = 94/175 (53%), Positives = 126/175 (72%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+ F+DH +RYTW+Y LK KS F+ FK+L EN+ TRI + SD G E+ L D
Sbjct: 542 YYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDY 601
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
L+Q+GI H S P+TP+ NGL+ERKHRHI+E L+LL+H+SVP++YW A + AV+LINR
Sbjct: 602 LSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINR 661
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
+P+ +L+ +SP++ G PNY LKVFGC CYP LRPYN+HKLE +S F+G
Sbjct: 662 LPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMG 716
>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
Length = 1048
Score = 206 bits (523), Expect = 3e-51
Identities = 92/175 (52%), Positives = 126/175 (72%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+ F+DH +RYTW+Y LK KS + F+ FKNL EN+ TRI SD G E+ L +
Sbjct: 539 YYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALREY 598
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
+Q+GI H S P+TP+ NGL+ERKHRHI+ET L+LL+H+S+P++YW A AV+LINR
Sbjct: 599 FSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINR 658
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
+P+ +L+ +SP++ G PNY L+VFGC CYP LRPYN+HKL+ +S VF+G
Sbjct: 659 LPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLG 713
>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
transposon [Arabidopsis thaliana]
Length = 1456
Score = 206 bits (523), Expect = 3e-51
Identities = 94/175 (53%), Positives = 126/175 (72%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+ F+DH +RYTW+Y LK KS F+ FK+L EN+ TRI + SD G E+ L D
Sbjct: 523 YYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDY 582
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
L+Q+GI H S P+TP+ NGL+ERKHRHI+E L+LL+H+SVP++YW A + AV+LINR
Sbjct: 583 LSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINR 642
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
+P+ +L+ +SP++ G PNY LKVFGC CYP LRPYN+HKLE +S F+G
Sbjct: 643 LPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMG 697
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 205 bits (521), Expect = 6e-51
Identities = 92/175 (52%), Positives = 126/175 (72%)
Frame = +3
Query: 3 YYISFIDHASRYTWIYLLKNKSDTSKAFLHFKNLAENQCNTRIKAIQSDGGTEYKPLHDI 182
YY+ F+DH +RYTW+Y LK KS + F+ FKNL EN+ TRI SD G E+ L +
Sbjct: 509 YYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALWEY 568
Query: 183 LAQNGIIHRISCPYTPQQNGLAERKHRHIIETALSLLAHSSVPQSYWDDAVTSAVFLINR 362
+Q+GI H S P+TP+ NGL+ERKHRHI+ET L+LL+H+S+P++YW A AV+LINR
Sbjct: 569 FSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINR 628
Query: 363 MPSKVLKYKSPYEVFTGHKPNYSFLKVFGCLCYPHLRPYNKHKLEFRSTPGVFIG 527
+P+ +L+ +SP++ G PNY L+VFGC CYP LRPYN+HKL+ +S VF+G
Sbjct: 629 LPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLG 683