BLASTX nr result
ID: Rehmannia23_contig00033043
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00033043
(358 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera] 197 2e-48
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 186 3e-45
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 183 2e-44
emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera] 182 3e-44
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] 179 4e-43
emb|CAN81655.1| hypothetical protein VITISV_042593 [Vitis vinifera] 150 2e-34
emb|CAN74721.1| hypothetical protein VITISV_006958 [Vitis vinifera] 147 2e-33
emb|CAN77976.1| hypothetical protein VITISV_010462 [Vitis vinifera] 137 1e-30
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ... 133 2e-29
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc... 129 3e-28
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc... 129 4e-28
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo... 129 4e-28
gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sa... 128 7e-28
emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera] 128 7e-28
gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subc... 128 7e-28
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ... 128 9e-28
dbj|BAB03249.1| polyprotein [Oryza sativa] 128 9e-28
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc... 128 9e-28
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc... 128 9e-28
gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subc... 128 9e-28
>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
Length = 1316
Score = 197 bits (500), Expect = 2e-48
Identities = 88/119 (73%), Positives = 104/119 (87%)
Frame = -2
Query: 357 RNFESNKINVSSYLLECSNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAK 178
++ +NKI+ S+YLL+ SN+WH RLGHVN++TL RL++L+ LP F ID +HKCE CVE+K
Sbjct: 582 KSINNNKIDSSAYLLKSSNIWHGRLGHVNYDTLCRLIHLDYLPKFNIDPNHKCETCVESK 641
Query: 177 MAKTPFHSVERETEPLELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
+ K PFHSVER TEPL+L HSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE
Sbjct: 642 LTKVPFHSVERSTEPLDLFHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 700
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 186 bits (472), Expect = 3e-45
Identities = 83/114 (72%), Positives = 100/114 (87%)
Frame = -2
Query: 342 NKINVSSYLLECSNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAKTP 163
NK + S+Y+LE SNLWH RLGHVN++TL+RL+NL +P F+I+S+HKCE CVEAK+ ++
Sbjct: 458 NKASTSTYMLESSNLWHGRLGHVNYDTLRRLINLNHIPTFQINSNHKCETCVEAKLTRSS 517
Query: 162 FHSVERETEPLELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
F SVER TEPL+LIHSDICDLKFVQTRGG KYFITF+DD T+YCYVYLLKSKDE
Sbjct: 518 FQSVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDE 571
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 183 bits (464), Expect = 2e-44
Identities = 82/114 (71%), Positives = 99/114 (86%)
Frame = -2
Query: 342 NKINVSSYLLECSNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAKTP 163
NK + S+Y+LE SNLWH RL HVN++TL+RL+NL +P F+I+S+HKCE CVEAK+ ++
Sbjct: 458 NKASTSTYMLESSNLWHGRLRHVNYDTLRRLINLNHIPTFQINSNHKCETCVEAKLTRSS 517
Query: 162 FHSVERETEPLELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
F SVER TEPL+LIHSDICDLKFVQTRGG KYFITF+DD T+YCYVYLLKSKDE
Sbjct: 518 FQSVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDE 571
>emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]
Length = 839
Score = 182 bits (463), Expect = 3e-44
Identities = 83/118 (70%), Positives = 96/118 (81%)
Frame = -2
Query: 354 NFESNKINVSSYLLECSNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKM 175
+F +NK++ S YL+E WH RLGHVN TLK L+N+ LL F ID HKCE+CVEAKM
Sbjct: 251 DFNNNKVSTSVYLIESFTFWHNRLGHVNNKTLKMLINMNLLHFFSIDFKHKCEVCVEAKM 310
Query: 174 AKTPFHSVERETEPLELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
AK PFHS+ER T+P +LIH+DICDLKFVQTRGGK YFITFIDDC RYCYVYLL+SKDE
Sbjct: 311 AKPPFHSIERNTKPPDLIHNDICDLKFVQTRGGKMYFITFIDDCIRYCYVYLLRSKDE 368
>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
Length = 701
Score = 179 bits (453), Expect = 4e-43
Identities = 77/115 (66%), Positives = 98/115 (85%)
Frame = -2
Query: 345 SNKINVSSYLLECSNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAKT 166
+NK S+YLLE SN+WH RLGHVNFN+L++L+N++ +PNF+ID HKC+ CVEAK+ ++
Sbjct: 446 NNKATSSAYLLESSNIWHGRLGHVNFNSLRKLINMKHIPNFQIDLKHKCKTCVEAKLTRS 505
Query: 165 PFHSVERETEPLELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
F ++R +EPL+LIHSDICD K +QTRGG KYFITFIDDCT+YCYVYLLKSKDE
Sbjct: 506 SFQIIQRNSEPLDLIHSDICDFKSIQTRGGNKYFITFIDDCTKYCYVYLLKSKDE 560
>emb|CAN81655.1| hypothetical protein VITISV_042593 [Vitis vinifera]
Length = 627
Score = 150 bits (379), Expect = 2e-34
Identities = 74/118 (62%), Positives = 86/118 (72%)
Frame = -2
Query: 354 NFESNKINVSSYLLECSNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKM 175
+F +NK + YL+E LWH RLGHV+ TLKRL+N+ LLP+F ID HKCE+CVEAKM
Sbjct: 260 DFNNNKASTFVYLIESFTLWHDRLGHVSNKTLKRLINMNLLPSFSIDFKHKCEVCVEAKM 319
Query: 174 AKTPFHSVERETEPLELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
AK PFHS+ER TE L+LIHSDI K YFITFIDDCTRY YVYLL+SK E
Sbjct: 320 AKPPFHSIERNTESLDLIHSDI----------WKMYFITFIDDCTRYYYVYLLRSKYE 367
>emb|CAN74721.1| hypothetical protein VITISV_006958 [Vitis vinifera]
Length = 487
Score = 147 bits (370), Expect = 2e-33
Identities = 66/108 (61%), Positives = 84/108 (77%)
Frame = -2
Query: 324 SYLLECSNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAKTPFHSVER 145
+Y++E LWH RLGHVN++++ ++ NL LL F I+ KCEICVE+K A+ PF S+ER
Sbjct: 189 AYIVESCELWHSRLGHVNYHSMYKMANLGLLLKFDINETQKCEICVESKFARKPFKSIER 248
Query: 144 ETEPLELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
+E LEL+HSD+CDLK TRGG KYFITFIDD +R+CYVYLL SKDE
Sbjct: 249 SSELLELVHSDLCDLKMTPTRGGIKYFITFIDDYSRFCYVYLLHSKDE 296
>emb|CAN77976.1| hypothetical protein VITISV_010462 [Vitis vinifera]
Length = 288
Score = 137 bits (345), Expect = 1e-30
Identities = 64/109 (58%), Positives = 81/109 (74%)
Frame = -2
Query: 327 SSYLLECSNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAKTPFHSVE 148
S+Y++E LWH RLGHVN+ ++ ++ NL LL F I+ KCEICVE+K A+ PF S+E
Sbjct: 124 SAYIVESCELWHSRLGHVNYRSMYKMSNLGLLXKFDINETQKCEICVESKFARKPFKSIE 183
Query: 147 RETEPLELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
R E LEL+ SD+ DLK TRGG KYFITFIDD +++CYVYLL SKDE
Sbjct: 184 RSGELLELVXSDLXDLKMNXTRGGIKYFITFIDDYSKFCYVYLLHSKDE 232
>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
Length = 1309
Score = 133 bits (335), Expect = 2e-29
Identities = 62/119 (52%), Positives = 83/119 (69%), Gaps = 1/119 (0%)
Frame = -2
Query: 354 NFESNKINVSSYLLECSNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKM 175
N S +NV +N+WH RL HVNF +KRL ++ L+P +K KC ICV+AK
Sbjct: 432 NHSSYHVNVVCNNDSINNIWHSRLCHVNFEAIKRLSDMSLIPEYKHVKGVKCGICVQAKQ 491
Query: 174 AKTPFHSVE-RETEPLELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
+ PFH+VE R T PLELIHSDIC++ + +GGK+YF+T IDD TR+CY+YLL++KDE
Sbjct: 492 PRKPFHTVEGRSTTPLELIHSDICEMNGIIIKGGKRYFLTLIDDATRFCYIYLLRTKDE 550
>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1303
Score = 129 bits (325), Expect = 3e-28
Identities = 62/115 (53%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
Frame = -2
Query: 342 NKINVSSYLLECSNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAKTP 163
N +N S + E SN+WH RL HVNF L RL N+ L+P F + KC CV++K + P
Sbjct: 530 NAVNHISEIDE-SNVWHSRLCHVNFGCLTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKP 588
Query: 162 FHSVE-RETEPLELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
+ E R PLEL+HSD+C++ V T+GGKKYF+T IDDCTR+CYVYLLK+KDE
Sbjct: 589 HKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDE 643
>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1413
Score = 129 bits (324), Expect = 4e-28
Identities = 61/117 (52%), Positives = 81/117 (69%), Gaps = 3/117 (2%)
Frame = -2
Query: 342 NKINVSSYLLEC--SNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAK 169
N NV +++ E SN+WH RL HVNF + RL N+ L+P F + KC CV++K +
Sbjct: 527 NNHNVVNHISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPR 586
Query: 168 TPFHSVE-RETEPLELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
P + E R PLEL+HSD+C++ V T+GGKKYF+T IDDCTR+CYVYLLK+KDE
Sbjct: 587 KPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDE 643
>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
Length = 1394
Score = 129 bits (324), Expect = 4e-28
Identities = 61/117 (52%), Positives = 81/117 (69%), Gaps = 3/117 (2%)
Frame = -2
Query: 342 NKINVSSYLLEC--SNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAK 169
N NV +++ E SN+WH RL HVNF + RL N+ L+P F + KC CV++K +
Sbjct: 508 NNHNVVNHISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPR 567
Query: 168 TPFHSVE-RETEPLELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
P + E R PLEL+HSD+C++ V T+GGKKYF+T IDDCTR+CYVYLLK+KDE
Sbjct: 568 KPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDE 624
>gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1408
Score = 128 bits (322), Expect = 7e-28
Identities = 58/103 (56%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Frame = -2
Query: 306 SNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAKTPFHSVE-RETEPL 130
SN+WH RL HVNF + RL N+ L+P F + KC CV++K + P + E R PL
Sbjct: 536 SNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPL 595
Query: 129 ELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
ELIHSD+C++ V T+GGKKYF+T IDDCTR+CYVYLLK+KDE
Sbjct: 596 ELIHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDE 638
>emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera]
Length = 565
Score = 128 bits (322), Expect = 7e-28
Identities = 59/115 (51%), Positives = 83/115 (72%)
Frame = -2
Query: 345 SNKINVSSYLLECSNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAKT 166
+N + S+Y+++ + WH RLGHVNF+ +K++V L L+P +++H KCE CVE+K K
Sbjct: 312 NNTSSSSAYIVDSCDTWHGRLGHVNFSYMKKMVELSLIPKLSLENHGKCESCVESKTTKK 371
Query: 165 PFHSVERETEPLELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
SVERE + L LIHSD+ DLK TR GK+++ITFIDD +RY VYLL++KDE
Sbjct: 372 SCKSVERELDLLSLIHSDLGDLKNTMTRDGKRFYITFIDDYSRYTRVYLLRNKDE 426
>gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1479
Score = 128 bits (322), Expect = 7e-28
Identities = 58/103 (56%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Frame = -2
Query: 306 SNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAKTPFHSVE-RETEPL 130
SN+WH RL HVNF + RL N+ L+P F + KC CV++K + P + E R PL
Sbjct: 607 SNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPL 666
Query: 129 ELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
ELIHSD+C++ V T+GGKKYF+T IDDCTR+CYVYLLK+KDE
Sbjct: 667 ELIHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDE 709
>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
Length = 1268
Score = 128 bits (321), Expect = 9e-28
Identities = 57/103 (55%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Frame = -2
Query: 306 SNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAKTPFHSVE-RETEPL 130
SN+WH RL HVNF + RL N+ L+P F + KC CV++K + P + E R PL
Sbjct: 396 SNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPL 455
Query: 129 ELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
EL+HSD+C++ V T+GGKKYF+T IDDCTR+CYVYLLK+KDE
Sbjct: 456 ELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDE 498
>dbj|BAB03249.1| polyprotein [Oryza sativa]
Length = 1268
Score = 128 bits (321), Expect = 9e-28
Identities = 57/103 (55%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Frame = -2
Query: 306 SNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAKTPFHSVE-RETEPL 130
SN+WH RL HVNF + RL N+ L+P F + KC CV++K + P + E R PL
Sbjct: 396 SNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPL 455
Query: 129 ELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
EL+HSD+C++ V T+GGKKYF+T IDDCTR+CYVYLLK+KDE
Sbjct: 456 ELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDE 498
>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1448
Score = 128 bits (321), Expect = 9e-28
Identities = 57/103 (55%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Frame = -2
Query: 306 SNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAKTPFHSVE-RETEPL 130
SN+WH RL HVNF + RL N+ L+P F + KC CV++K + P + E R PL
Sbjct: 576 SNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPL 635
Query: 129 ELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
EL+HSD+C++ V T+GGKKYF+T IDDCTR+CYVYLLK+KDE
Sbjct: 636 ELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDE 678
>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1298
Score = 128 bits (321), Expect = 9e-28
Identities = 57/103 (55%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Frame = -2
Query: 306 SNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAKTPFHSVE-RETEPL 130
SN+WH RL HVNF + RL N+ L+P F + KC CV++K + P + E R PL
Sbjct: 541 SNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPL 600
Query: 129 ELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
EL+HSD+C++ V T+GGKKYF+T IDDCTR+CYVYLLK+KDE
Sbjct: 601 ELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDE 643
>gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1357
Score = 128 bits (321), Expect = 9e-28
Identities = 57/103 (55%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Frame = -2
Query: 306 SNLWHVRLGHVNFNTLKRLVNLELLPNFKIDSHHKCEICVEAKMAKTPFHSVE-RETEPL 130
SN+WH RL HVNF + RL N+ L+P F + KC CV++K + P + E R PL
Sbjct: 485 SNVWHSRLCHVNFGCMMRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPL 544
Query: 129 ELIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDE 1
EL+HSD+C++ V T+GGKKYF+T IDDCTR+CYVYLLK+KDE
Sbjct: 545 ELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDE 587