BLASTX nr result

ID: Rehmannia23_contig00033016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00033016
         (452 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_588284.1| hypothetical protein ZeamMp020 [Zea mays subsp....    70   3e-21
gb|AFW86835.1| hypothetical protein ZEAMMB73_214691 [Zea mays]         58   1e-06

>ref|YP_588284.1| hypothetical protein ZeamMp020 [Zea mays subsp. mays]
           gi|94502700|ref|YP_588308.1| hypothetical protein
           ZeamMp046 [Zea mays subsp. mays]
           gi|40795138|gb|AAR91182.1| hypothetical protein
           (mitochondrion) [Zea mays] gi|40795139|gb|AAR91183.1|
           hypothetical protein (mitochondrion) [Zea mays]
          Length = 99

 Score = 69.7 bits (169), Expect(2) = 3e-21
 Identities = 38/74 (51%), Positives = 48/74 (64%), Gaps = 7/74 (9%)
 Frame = +1

Query: 142 EEIKHGNKKK-KFLFDHFDRGGWRKWTKQTRISHRR------NRGKESY*KLS*PTFVEP 300
           ++IKHGNKK  K LF HF RGGW KW KQT I   +      +R ++++ + +   FV P
Sbjct: 2   DKIKHGNKKHLKCLFYHFYRGGWIKWAKQTHIFQSKRWVPFSSRQRKNHLENAPNPFVGP 61

Query: 301 CIVSDPNLPGARLP 342
           CIVSDPNLPGA  P
Sbjct: 62  CIVSDPNLPGASPP 75



 Score = 57.8 bits (138), Expect(2) = 3e-21
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = +3

Query: 330 SAPPIEASEVGEPYDGQLSPAVRRGLSC 413
           ++PP+EASEVGEPYDGQLSPAVRRGLSC
Sbjct: 72  ASPPLEASEVGEPYDGQLSPAVRRGLSC 99


>gb|AFW86835.1| hypothetical protein ZEAMMB73_214691 [Zea mays]
          Length = 77

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/76 (47%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
 Frame = +3

Query: 204 MEKVDKTDSHXXXXXXXXXXXXXXXXTHLRRAMY-----CK*SEP--ARSAPPIEASEVG 362
           M+KV KTDSH                  L+  +      C  S+P    ++PP+EASEVG
Sbjct: 1   MDKVGKTDSHFSIEKMGSFFVSTKKRIILKTLLNPFVGPCIVSDPNLPGASPPLEASEVG 60

Query: 363 EPYDGQLSPAVRRGLS 410
           EPYDGQLSPAVRRGLS
Sbjct: 61  EPYDGQLSPAVRRGLS 76


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