BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00032935
         (380 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS65318.1| hypothetical protein M569_09460 [Genlisea aurea]       197   2e-48
ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containi...   192   5e-47
ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containi...   191   1e-46
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
gb|EMJ28460.1| hypothetical protein PRUPE_ppa017811mg [Prunus pe...   168   6e-40
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi...   168   8e-40
ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containi...   164   1e-38
ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containi...   163   3e-38
ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citr...   162   6e-38
gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis]     159   3e-37
ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containi...   153   2e-35
ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containi...   151   1e-34
gb|EOY00680.1| Pentatricopeptide repeat superfamily protein isof...   150   2e-34
ref|XP_002312667.1| pentatricopeptide repeat-containing family p...   147   1e-33
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,...   144   2e-32
gb|ESW31683.1| hypothetical protein PHAVU_002G258900g [Phaseolus...   140   2e-31
ref|XP_002889980.1| pentatricopeptide repeat-containing protein ...   139   5e-31
ref|NP_172763.1| pentatricopeptide repeat-containing protein [Ar...   138   9e-31
ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutr...   136   3e-30
ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Caps...   136   3e-30

>gb|EPS65318.1| hypothetical protein M569_09460 [Genlisea aurea]
          Length = 519

 Score =  197 bits (500), Expect = 2e-48
 Identities = 96/127 (75%), Positives = 108/127 (85%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSE-NLVDDALKVLSLMGEKGRQPDVVSY 178
           NFELI  LFDDMD L IVPD+WAFNIY+NLLCSE + VD+AL+VL LM EKGR PDVV+Y
Sbjct: 96  NFELIFALFDDMDVLGIVPDLWAFNIYINLLCSEEDFVDEALRVLRLMAEKGRDPDVVTY 155

Query: 179 TIIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMR 358
           T IISGLCR KRYDEAV +W+ MI+ G+ PD+KACRALVLGLC  GKVDLAYELT+GDMR
Sbjct: 156 TTIISGLCRAKRYDEAVRLWRTMIETGIVPDSKACRALVLGLCQVGKVDLAYELTLGDMR 215

Query: 359 GKVRFSA 379
           GKV F A
Sbjct: 216 GKVDFDA 222



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/102 (34%), Positives = 57/102 (55%)
 Frame = +2

Query: 59  DIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEAVEMW 238
           D   +N+ V+  C    +D AL +   M   GRQPD++++ +++   C  +  DEA ++ 
Sbjct: 221 DASVYNVLVDGFCRSGRIDKALAIKDFMKRNGRQPDLITHNVLLRHCCDSRMVDEARKLM 280

Query: 239 KIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRGK 364
             M K G+ PD  +  AL+ GLC S +VD AY+L + +M  K
Sbjct: 281 AKMEKGGMKPDAFSYNALLKGLCRSRRVDRAYKLLITEMDAK 322


>ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Solanum lycopersicum]
          Length = 511

 Score =  192 bits (487), Expect = 5e-47
 Identities = 88/125 (70%), Positives = 110/125 (88%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           NF+LI RL +DMD + IVP+ WA+N+Y+NLLCSENLVD AL+++ +MGEKGR+PDVVSYT
Sbjct: 94  NFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYT 153

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRG 361
           I+ISGLCR+ R+D AVEMW  MI+KGL PDNKAC+ALV GLC SGKVDLAYELT+G +RG
Sbjct: 154 IVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGKVDLAYELTLGILRG 213

Query: 362 KVRFS 376
           +V+F+
Sbjct: 214 QVKFN 218



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/110 (30%), Positives = 56/110 (50%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           N  +   L D M S+ + PD   +   ++ LC    +  A  +   M E+G  PDV+SY 
Sbjct: 374 NSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVISYN 433

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLA 331
            +ISG C+  R  EA+ +++ M  +GLNPD    + ++ GL     + +A
Sbjct: 434 ALISGFCKASRVTEALSLYEDMQTRGLNPDEITFKLIIGGLIQGKNLSVA 483



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/98 (29%), Positives = 51/98 (52%)
 Frame = +2

Query: 71  FNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEAVEMWKIMI 250
           +N  +N  C    +D A  + + M   G +PD+V+Y + ++  C     +EA+++ + M 
Sbjct: 222 YNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLVTYNVFLNYCCNELMLEEAMKLIEKME 281

Query: 251 KKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRGK 364
             GL PD  +   L+ G C + ++D AY+L V  M  K
Sbjct: 282 GIGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETK 319



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/106 (31%), Positives = 54/106 (50%)
 Frame = +2

Query: 23  LFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLC 202
           LF +M+  +I+PD+  F I +     E     A  ++  M   G  PD V YT II  LC
Sbjct: 346 LFKEMEQKKILPDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLC 405

Query: 203 RVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           +  +   A  +++ M+++G+ PD  +  AL+ G C + +V  A  L
Sbjct: 406 KTGKLGVAESIFRDMVEQGVAPDVISYNALISGFCKASRVTEALSL 451


>ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like isoform X1 [Solanum tuberosum]
          Length = 511

 Score =  191 bits (484), Expect = 1e-46
 Identities = 87/125 (69%), Positives = 110/125 (88%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           NF+LI RL +DMD + IVP+ WA+N+Y+NLLCSENLVD AL+++ +MGEKGR+PDVVSYT
Sbjct: 94  NFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYT 153

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRG 361
           I+ISGLCR+ R+D AVEMW  MI+KGL PDNKAC+ALV GLC SG+VDLAYELT+G +RG
Sbjct: 154 IVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGRVDLAYELTLGILRG 213

Query: 362 KVRFS 376
           +V+F+
Sbjct: 214 QVKFN 218



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/98 (30%), Positives = 51/98 (52%)
 Frame = +2

Query: 71  FNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEAVEMWKIMI 250
           +N  +N  C    +D A  + + M   G +PD+V+Y + ++  C     +EAV++ + M 
Sbjct: 222 YNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLVTYNVFLNYCCNELMLEEAVKLIEKME 281

Query: 251 KKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRGK 364
             GL PD  +   L+ G C + ++D AY+L V  M  K
Sbjct: 282 GNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETK 319



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/106 (32%), Positives = 55/106 (51%)
 Frame = +2

Query: 23  LFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLC 202
           LF++M+  +IVPD+  F I +     E     A  ++  M   G  PD V YT II  LC
Sbjct: 346 LFEEMEQKKIVPDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLC 405

Query: 203 RVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           +  +   A  +++ M+++G+ PD  +  AL+ G C + +V  A  L
Sbjct: 406 KTGKLGVAESIFRDMVEQGVAPDVISYNALISGFCKASRVTEALSL 451



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/110 (30%), Positives = 55/110 (50%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           N  +   L D M S+ + PD   +   ++ LC    +  A  +   M E+G  PDV+SY 
Sbjct: 374 NSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVISYN 433

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLA 331
            +ISG C+  R  EA+ +++ M  + LNPD    + ++ GL     + +A
Sbjct: 434 ALISGFCKASRVTEALSLYEDMQARDLNPDEITFKLIIGGLIQEKNLSVA 483



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
 Frame = +2

Query: 56  PDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEAVE- 232
           PD+  +N+++N  C+E ++++A+K++  M   G +PD  SY  ++ G C+  R D+A + 
Sbjct: 252 PDLVTYNVFLNYCCNELMLEEAVKLIEKMEGNGLEPDGYSYNQLLRGFCKANRLDKAYKL 311

Query: 233 MWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           M   M  KGL  D  +   ++  LC +     AY L
Sbjct: 312 MVDKMETKGL-VDVVSYNTIIRALCKTDHSKKAYNL 346


>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|296081374|emb|CBI16807.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  179 bits (455), Expect = 3e-43
 Identities = 83/125 (66%), Positives = 103/125 (82%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           NF LI +L +DMD L  VPDIWA+NIY+NLLC EN +D AL V+  M EKGR+PD+V+YT
Sbjct: 94  NFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYT 153

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRG 361
           I+I+GLCR  R+D AVE+W+ M++KG +PD KACRALVLGLC  GKVDLAYELTVG MRG
Sbjct: 154 IVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRG 213

Query: 362 KVRFS 376
           +++FS
Sbjct: 214 RIKFS 218



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/98 (30%), Positives = 52/98 (53%)
 Frame = +2

Query: 71  FNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEAVEMWKIMI 250
           +N  +N  C    +D A  ++S M   G +PD+V+Y ++++  C     +EA  + K M 
Sbjct: 222 YNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKME 281

Query: 251 KKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRGK 364
           + G+ PD  +   L+ GLC + ++D AY + V  M  K
Sbjct: 282 RSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAK 319



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/107 (32%), Positives = 54/107 (50%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +LF++M    I PD+  F I +     E   + A K+L  M   G  PD V YT I+  L
Sbjct: 345 KLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHL 404

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           C+  +   A  ++  M++ G+ PD  +  AL+ GLC + +V  A  L
Sbjct: 405 CKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHL 451



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 36/104 (34%), Positives = 53/104 (50%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +L D M  L ++PD   +   V+ LC    +  A  V   M E G  PDVVSY  +I+GL
Sbjct: 380 KLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGL 439

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLA 331
           CR  R  EA+ +++ M   G  PD    + ++ GL    K+ +A
Sbjct: 440 CRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVA 483



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +2

Query: 56  PDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEA-VE 232
           PD+  +N+ +N  C E L+++A  ++  M   G +PDV SY  ++ GLC+  R D+A + 
Sbjct: 252 PDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMM 311

Query: 233 MWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRGK 364
           M   M  KGL  D  +   ++  LC +     AY+L   +M GK
Sbjct: 312 MVNKMEAKGL-CDVVSYNTIIKALCTASHTKRAYKL-FEEMGGK 353


>gb|EMJ28460.1| hypothetical protein PRUPE_ppa017811mg [Prunus persica]
          Length = 541

 Score =  168 bits (426), Expect = 6e-40
 Identities = 78/125 (62%), Positives = 98/125 (78%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           NF LI +L  DMD L  VPDIWAFNIY+NLLC EN    AL+V   M +KGR+PDVVSYT
Sbjct: 94  NFTLIEKLIRDMDRLGAVPDIWAFNIYLNLLCQENRAHFALEVFHRMVDKGREPDVVSYT 153

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRG 361
           I+I GLC+ +++D+AV++W  MI+KG  PDN AC ALV+GLCD GKVDLAY L +G+M+G
Sbjct: 154 ILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACTALVVGLCDGGKVDLAYNLVIGEMKG 213

Query: 362 KVRFS 376
           +V+FS
Sbjct: 214 QVKFS 218



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/104 (32%), Positives = 55/104 (52%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +L D M  + ++PD   +   V+ LC    +  A  V S M EKG  PD VS+  +I+GL
Sbjct: 380 KLLDQMTVMGLLPDRIFYTTIVDHLCKSGKIAMAYSVFSDMLEKGIAPDAVSFNALINGL 439

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLA 331
           C+  R  EA+ +++ M  +G  PD    + ++ GL    K+ +A
Sbjct: 440 CKASRVSEAMHLYEEMQNRGCCPDEVTFKLIIGGLIRENKLSVA 483



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 35/107 (32%), Positives = 55/107 (51%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +LF++M     +PD+  F I +     E   D A K+L  M   G  PD + YT I+  L
Sbjct: 345 KLFEEMGQKGTMPDVVTFTILIEAFLREGSSDIANKLLDQMTVMGLLPDRIFYTTIVDHL 404

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           C+  +   A  ++  M++KG+ PD  +  AL+ GLC + +V  A  L
Sbjct: 405 CKSGKIAMAYSVFSDMLEKGIAPDAVSFNALINGLCKASRVSEAMHL 451



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
 Frame = +2

Query: 23  LFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLC 202
           +F DM    I PD  +FN  +N LC  + V +A+ +   M  +G  PD V++ +II GL 
Sbjct: 416 VFSDMLEKGIAPDAVSFNALINGLCKASRVSEAMHLYEEMQNRGCCPDEVTFKLIIGGLI 475

Query: 203 RVKRYDEAVEMWKIMIKKGLNPDNKACRAL--VLGLCDSGKVDLAYELTVGD 352
           R  +   A  +W  M++KG   D      L  +L  C+   V +     +G+
Sbjct: 476 RENKLSVACRVWDQMMEKGFTLDGAVSERLMKLLLFCECQTVQMGMGEGLGE 527



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/94 (32%), Positives = 48/94 (51%)
 Frame = +2

Query: 59  DIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEAVEMW 238
           ++ ++N  +   C  +    A K+   MG+KG  PDVV++TI+I    R    D A ++ 
Sbjct: 323 NVVSYNTIITAFCRAHRTGRAYKLFEEMGQKGTMPDVVTFTILIEAFLREGSSDIANKLL 382

Query: 239 KIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
             M   GL PD      +V  LC SGK+ +AY +
Sbjct: 383 DQMTVMGLLPDRIFYTTIVDHLCKSGKIAMAYSV 416


>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
           gi|449494962|ref|XP_004159696.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  168 bits (425), Expect = 8e-40
 Identities = 79/125 (63%), Positives = 100/125 (80%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           NF LI RL +DM  L  +PDIWAFNIY+NLL  ENL++ ALK    M  KGR+PDVV+YT
Sbjct: 94  NFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYT 153

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRG 361
           II+  LC+ K+YD+AVE W+ M+ KGL+PD KAC ALV+GLCD GKVDLAYELTVG+M+G
Sbjct: 154 IIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYELTVGEMKG 213

Query: 362 KVRFS 376
           +++F+
Sbjct: 214 EMKFN 218



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/96 (32%), Positives = 51/96 (53%)
 Frame = +2

Query: 8   ELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTII 187
           E+   +F DM  + I PD+ ++N  +N LC  + V +A+ +   M  +G  PD V++ +I
Sbjct: 410 EMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLI 469

Query: 188 ISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALV 295
           I GL R K    A ++W  M++KG   D      L+
Sbjct: 470 IGGLLRKKELSLACQVWDQMMEKGYTLDKFLSETLI 505



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/95 (33%), Positives = 50/95 (52%)
 Frame = +2

Query: 56  PDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEAVEM 235
           PD+  +NI +N  C   +++ A K +  M   G +PDV SY  ++ GLC+  R D+A ++
Sbjct: 252 PDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKL 311

Query: 236 WKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
              M +KGL  D  +   ++  LC S     AY L
Sbjct: 312 MNTMWEKGL-CDTVSYNTVIGALCKSFATRKAYRL 345



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/104 (28%), Positives = 54/104 (51%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           RLF++M    + PD+  F   +     E     A  +L  M +    PD++ YT ++   
Sbjct: 344 RLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYF 403

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLA 331
           C+ ++ + A  +++ MI+ G++PD  +  AL+ GLC + KV  A
Sbjct: 404 CKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEA 447



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/106 (29%), Positives = 54/106 (50%)
 Frame = +2

Query: 23  LFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLC 202
           L   M    ++PD+  +   V+  C    ++ A  V   M E G  PDVVSY  +I+GLC
Sbjct: 380 LLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLC 439

Query: 203 RVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           +  +  EA+ +++ M  +G  PD    + ++ GL    ++ LA ++
Sbjct: 440 KASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQV 485


>ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568860947|ref|XP_006483973.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 517

 Score =  164 bits (415), Expect = 1e-38
 Identities = 78/124 (62%), Positives = 96/124 (77%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           NF LI  L D+MD L  +PDIWAFNIY+NLL  EN +D AL+V   M  KGR+PD V+YT
Sbjct: 94  NFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYT 153

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRG 361
           I+I GLC+ K++D+AV+ W+ MI+ G+ PDNKAC ALV+GLC  GKVDLAYELTVG M+G
Sbjct: 154 IVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 213

Query: 362 KVRF 373
           KV F
Sbjct: 214 KVEF 217



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/107 (31%), Positives = 57/107 (53%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +L + M  + + PD   +   ++ LC    +  A  V   M E+G  PDV+SY  +I+GL
Sbjct: 380 KLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGL 439

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           C+  R  EA+ +++ M  +G +PD    + L+ GL    K++LA  L
Sbjct: 440 CKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRL 486



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/91 (31%), Positives = 50/91 (54%)
 Frame = +2

Query: 23  LFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLC 202
           +F DM    I PD+ ++N  +N LC  + V +A+ +   M  +G  PD V++ ++I GL 
Sbjct: 416 VFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLV 475

Query: 203 RVKRYDEAVEMWKIMIKKGLNPDNKACRALV 295
           + K+ + A  +W  M++KG   D     AL+
Sbjct: 476 QEKKLELACRLWDQMMEKGFTLDKTVSAALI 506



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
 Frame = +2

Query: 56  PDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEA-VE 232
           PD+  +N  +N  C E ++D+A K++  M   G +PDV SY  ++ GLC   + D+A + 
Sbjct: 252 PDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMF 311

Query: 233 MWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           M K M  KGL  D  +   ++   C  G+   AY+L
Sbjct: 312 MVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKL 346



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/107 (31%), Positives = 53/107 (49%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +LF++M    I  D+  F I +     E     A K+L+ M      PD + YT II  L
Sbjct: 345 KLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCL 404

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           C+ +    A  ++  M+++G+ PD  +  AL+ GLC S +V  A  L
Sbjct: 405 CKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 451



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/98 (30%), Positives = 49/98 (50%)
 Frame = +2

Query: 71  FNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEAVEMWKIMI 250
           +N  ++  C    +  A+ + S M   G +PD+V+Y  I++  C     DEA ++   M 
Sbjct: 222 YNALISGFCRTGRICRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEME 281

Query: 251 KKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRGK 364
             G+ PD  +   L+ GLC+S ++D AY   V  M  K
Sbjct: 282 SCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAK 319


>ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 516

 Score =  163 bits (412), Expect = 3e-38
 Identities = 77/125 (61%), Positives = 93/125 (74%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           NF LI +L  DMD L  VPDIWAFNIY+NLLC EN +  AL+V   M +KGR+PDVVSYT
Sbjct: 95  NFTLIEKLLRDMDRLGSVPDIWAFNIYLNLLCQENRIHYALEVFDRMADKGREPDVVSYT 154

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRG 361
           I+I GLC+  R+D AVE+W  MI KG  PD  AC ALV+GLC  GKVDLAY+L +G+M+G
Sbjct: 155 IVIHGLCKAGRFDNAVEIWNGMISKGFRPDTIACTALVVGLCGGGKVDLAYDLVIGEMKG 214

Query: 362 KVRFS 376
            V F+
Sbjct: 215 GVEFN 219



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/107 (33%), Positives = 53/107 (49%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +LF +M    I+PD+  F I +     E   D A K+L  M      PD + YT II  L
Sbjct: 346 KLFQEMFQKGILPDVVTFTILIGAFLREGSSDVAKKLLDQMTGMDLLPDRIFYTTIIDHL 405

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           C+  +   A +M+  M++KG+  D     AL+ GLC + +V  A  L
Sbjct: 406 CKSGKIAMACDMFNDMLEKGITADVVLYNALISGLCRASRVTEAMHL 452



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/104 (30%), Positives = 54/104 (51%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +L D M  + ++PD   +   ++ LC    +  A  + + M EKG   DVV Y  +ISGL
Sbjct: 381 KLLDQMTGMDLLPDRIFYTTIIDHLCKSGKIAMACDMFNDMLEKGITADVVLYNALISGL 440

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLA 331
           CR  R  EA+ +++ M  +G  PD    + ++ GL    ++ +A
Sbjct: 441 CRASRVTEAMHLYEEMQTRGCFPDEVTYKVVIGGLIKDKRLSVA 484


>ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citrus clementina]
           gi|557540418|gb|ESR51462.1| hypothetical protein
           CICLE_v10031251mg [Citrus clementina]
          Length = 517

 Score =  162 bits (409), Expect = 6e-38
 Identities = 77/124 (62%), Positives = 95/124 (76%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           NF LI  L D+MD L  +PDIWAFNIY+NLL  EN +D AL+V   M  KGR+PD V+YT
Sbjct: 94  NFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYT 153

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRG 361
           I+I GLC+ K++D+AV+ W+ MI+ G+ PDNKAC ALV+GLC  GKVDLAYE TVG M+G
Sbjct: 154 IVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYERTVGAMKG 213

Query: 362 KVRF 373
           KV F
Sbjct: 214 KVEF 217



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/107 (31%), Positives = 57/107 (53%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +L + M  + + PD   +   ++ LC    +  A  V   M E+G  PDV+SY  +I+GL
Sbjct: 380 KLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGL 439

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           C+  R  EA+ +++ M  +G +PD    + L+ GL    K++LA  L
Sbjct: 440 CKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRL 486



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/91 (31%), Positives = 50/91 (54%)
 Frame = +2

Query: 23  LFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLC 202
           +F DM    I PD+ ++N  +N LC  + V +A+ +   M  +G  PD V++ ++I GL 
Sbjct: 416 VFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLV 475

Query: 203 RVKRYDEAVEMWKIMIKKGLNPDNKACRALV 295
           + K+ + A  +W  M++KG   D     AL+
Sbjct: 476 QEKKLELACRLWDQMMEKGFTLDKTVSAALI 506



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
 Frame = +2

Query: 56  PDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEA-VE 232
           PD+  +N  +N  C E ++D+A K++  M   G +PDV SY  ++ GLC   + D+A + 
Sbjct: 252 PDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMF 311

Query: 233 MWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           M K M  KGL  D  +   ++   C  G+   AY+L
Sbjct: 312 MVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKL 346



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/107 (31%), Positives = 53/107 (49%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +LF++M    I  D+  F I +     E     A K+L+ M      PD + YT II  L
Sbjct: 345 KLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCL 404

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           C+ +    A  ++  M+++G+ PD  +  AL+ GLC S +V  A  L
Sbjct: 405 CKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 451



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/98 (30%), Positives = 49/98 (50%)
 Frame = +2

Query: 71  FNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEAVEMWKIMI 250
           +N  ++  C    +  A+ + S M   G +PD+V+Y  I++  C     DEA ++   M 
Sbjct: 222 YNALISGFCRTGRIRRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEME 281

Query: 251 KKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRGK 364
             G+ PD  +   L+ GLC+S ++D AY   V  M  K
Sbjct: 282 SCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAK 319


>gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis]
          Length = 513

 Score =  159 bits (403), Expect = 3e-37
 Identities = 75/125 (60%), Positives = 97/125 (77%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           NF L+ +L +DMD L  +PDIWAFNIY+N+LC E+ V  AL+V   M E+GR+PDVV+YT
Sbjct: 94  NFLLVEKLLEDMDKLGCIPDIWAFNIYLNVLCGEHRVQLALEVFRRMVERGREPDVVTYT 153

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRG 361
           I+I GLC+  ++D AVE W  MIKKG  PD  AC ALV+GLC+ GKVDLAYELTVG ++G
Sbjct: 154 ILIDGLCKAWKFDAAVEAWCGMIKKGFVPDTIACTALVVGLCEGGKVDLAYELTVGALKG 213

Query: 362 KVRFS 376
           +V+F+
Sbjct: 214 RVKFN 218



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 40/104 (38%), Positives = 58/104 (55%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           RL D M  + ++PD   + I V+ LC    +  A  V S M E+G  PDV+SY  II+GL
Sbjct: 380 RLLDQMTGMGLLPDCLFYTIIVDHLCKAGKIGMAHSVFSDMVERGITPDVISYNAIINGL 439

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLA 331
           C+  R  EAV +++ M  +GL PD    + ++ GL    K+ LA
Sbjct: 440 CKAFRVSEAVHLYEEMQARGLCPDEVTFKLIIGGLIKENKLPLA 483



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/107 (31%), Positives = 56/107 (52%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +LF++M    I PD+  F I +    S    D A ++L  M   G  PD + YTII+  L
Sbjct: 345 QLFEEMRQKGIEPDVVTFTILIKAFLSVGSSDVAKRLLDQMTGMGLLPDCLFYTIIVDHL 404

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           C+  +   A  ++  M+++G+ PD  +  A++ GLC + +V  A  L
Sbjct: 405 CKAGKIGMAHSVFSDMVERGITPDVISYNAIINGLCKAFRVSEAVHL 451



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/98 (29%), Positives = 49/98 (50%)
 Frame = +2

Query: 71  FNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEAVEMWKIMI 250
           +N  ++  C    +D A  +   M   G +PD+V+Y +++   C     DEA ++   M 
Sbjct: 222 YNSLISGFCRAGRIDKAQVIKDFMKRDGCEPDLVTYNVLLIYCCDKLMLDEANKLINTME 281

Query: 251 KKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRGK 364
           + G+ PD+ +   L+ GLC + + D AY L V  M  K
Sbjct: 282 RIGMKPDSYSYNKLLKGLCRAHRPDKAYLLMVDSMESK 319


>ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like isoform X1 [Glycine max]
           gi|571471241|ref|XP_006585252.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 521

 Score =  153 bits (387), Expect = 2e-35
 Identities = 74/126 (58%), Positives = 93/126 (73%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           N  LI  L  DMDSL  VPDIWAFN Y+NLLC +N ++ AL++   M  KGR PDVVSYT
Sbjct: 99  NLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYT 158

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRG 361
           III  LC  KR+DEA ++W+ +I KGL+PD KAC ALV+GLC  G+VDLAYEL VG ++G
Sbjct: 159 IIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKG 218

Query: 362 KVRFSA 379
            V+ ++
Sbjct: 219 GVKVNS 224



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 37/107 (34%), Positives = 58/107 (54%)
 Frame = +2

Query: 11  LILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIII 190
           ++ +L D+M  +R++PD   +   V+ LC    VD A  V   M E G  PDV+SY  ++
Sbjct: 382 VVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALL 441

Query: 191 SGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLA 331
           +G C+  R  +A+ ++  M  KGL PD    + +V GL    K+ LA
Sbjct: 442 NGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLA 488



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/98 (31%), Positives = 52/98 (53%)
 Frame = +2

Query: 71  FNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEAVEMWKIMI 250
           +N  ++  C    VD A+K+ + M   G  PD+V+Y I+++  C     DEAV + + M 
Sbjct: 227 YNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETME 286

Query: 251 KKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRGK 364
           + G+ PD  +   L+ G C +  VD A+ + V  M+ K
Sbjct: 287 RSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTK 324



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/100 (31%), Positives = 53/100 (53%)
 Frame = +2

Query: 23  LFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLC 202
           LF++M    I PD+  FNI ++    E       K+L  M +    PD + YT ++  LC
Sbjct: 351 LFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLC 410

Query: 203 RVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKV 322
           +  + D A  +++ M++ G+NPD  +  AL+ G C + +V
Sbjct: 411 KNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRV 450



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
 Frame = +2

Query: 53  VPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEA-V 229
           VPD+  +NI +N  C E +VD+A++++  M   G +PD+ SY  ++ G C+    D A +
Sbjct: 256 VPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHL 315

Query: 230 EMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
            M + M  KG+  D  +   ++   C + +    YEL
Sbjct: 316 MMVERMQTKGM-CDVVSYNTVITAFCKARRTRKGYEL 351



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/91 (31%), Positives = 47/91 (51%)
 Frame = +2

Query: 23  LFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLC 202
           +F DM    + PD+ ++N  +N  C  + V DA+ +   M  KG  PD V+Y +I+ GL 
Sbjct: 421 VFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLI 480

Query: 203 RVKRYDEAVEMWKIMIKKGLNPDNKACRALV 295
           R K+   A  +W  M+++G   +      LV
Sbjct: 481 RGKKISLACRVWDQMMERGFTLNRHLSETLV 511



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
 Frame = +2

Query: 17  LRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDA-LKVLSLMGEKGRQPDVVSYTIIIS 193
           +RL + M+   + PD++++N  +   C  N+VD A L ++  M  KG   DVVSY  +I+
Sbjct: 279 VRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKG-MCDVVSYNTVIT 337

Query: 194 GLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
             C+ +R  +  E+++ M  KG+ PD      L+      G   +  +L
Sbjct: 338 AFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKL 386


>ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cicer arietinum]
          Length = 516

 Score =  151 bits (381), Expect = 1e-34
 Identities = 72/123 (58%), Positives = 90/123 (73%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           NF LI  L  DMD+L  VPDIWAFNIY+NLLC EN ++ AL++   M  KGR+PDVVSY 
Sbjct: 95  NFSLIDYLLRDMDALGFVPDIWAFNIYLNLLCRENQLETALQLFRTMPLKGREPDVVSYN 154

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRG 361
           II++ LC+ KR DE   +W+ +I+KGL PD K C ALV+GLC +G VDLAYEL VG + G
Sbjct: 155 IIVNALCKAKRVDEVARVWRSLIEKGLKPDFKVCAALVVGLCSAGNVDLAYELIVGVING 214

Query: 362 KVR 370
            V+
Sbjct: 215 GVK 217



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 39/104 (37%), Positives = 55/104 (52%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +L D M ++ IVPD+  +   V+ LC    VD A  V   M E G  PDVVSY  +I+G 
Sbjct: 381 KLLDQMTTMGIVPDLIFYTTIVDRLCKAWKVDIAHGVFCDMVENGVSPDVVSYNALINGF 440

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLA 331
           C+  R  +A+ ++  M  KGL PD    + +V GL    K+  A
Sbjct: 441 CKASRVMDAMCLYDEMQDKGLYPDGVTFKLIVGGLIRENKISEA 484



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/91 (32%), Positives = 50/91 (54%)
 Frame = +2

Query: 23  LFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLC 202
           +F DM    + PD+ ++N  +N  C  + V DA+ +   M +KG  PD V++ +I+ GL 
Sbjct: 417 VFCDMVENGVSPDVVSYNALINGFCKASRVMDAMCLYDEMQDKGLYPDGVTFKLIVGGLI 476

Query: 203 RVKRYDEAVEMWKIMIKKGLNPDNKACRALV 295
           R  +  EA ++W  M++KG   D +    LV
Sbjct: 477 RENKISEACKVWDQMMEKGFTLDRRLSETLV 507



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = +2

Query: 53  VPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEA-V 229
           VPD+  +NI +N  C E ++D+ +K++  M   G +PD+ SY  ++ G C+  + D A +
Sbjct: 252 VPDLVTYNILLNYCCDEVMLDEVVKLVESMERSGVEPDLYSYNELLKGFCKANQVDRAYL 311

Query: 230 EMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
            M K M  KG+  D  +   ++   C + +++  YEL
Sbjct: 312 TMVKRMQTKGM-CDVVSYNTIIAAFCKARRIERGYEL 347



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/100 (32%), Positives = 53/100 (53%)
 Frame = +2

Query: 23  LFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLC 202
           LF++M    I PD+  F + +     E   D A K+L  M   G  PD++ YT I+  LC
Sbjct: 347 LFEEMRRKGIQPDVITFTVLIEAFFKEGGSDVAKKLLDQMTTMGIVPDLIFYTTIVDRLC 406

Query: 203 RVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKV 322
           +  + D A  ++  M++ G++PD  +  AL+ G C + +V
Sbjct: 407 KAWKVDIAHGVFCDMVENGVSPDVVSYNALINGFCKASRV 446



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
 Frame = +2

Query: 14  ILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDA-LKVLSLMGEKGRQPDVVSYTIII 190
           +++L + M+   + PD++++N  +   C  N VD A L ++  M  KG   DVVSY  II
Sbjct: 274 VVKLVESMERSGVEPDLYSYNELLKGFCKANQVDRAYLTMVKRMQTKG-MCDVVSYNTII 332

Query: 191 SGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           +  C+ +R +   E+++ M +KG+ PD      L+      G  D+A +L
Sbjct: 333 AAFCKARRIERGYELFEEMRRKGIQPDVITFTVLIEAFFKEGGSDVAKKL 382



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/98 (30%), Positives = 50/98 (51%)
 Frame = +2

Query: 71  FNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEAVEMWKIMI 250
           +N  ++  C    +D AL +   M   G  PD+V+Y I+++  C     DE V++ + M 
Sbjct: 223 YNALISGFCRMGRIDKALAIKGFMSRNGCVPDLVTYNILLNYCCDEVMLDEVVKLVESME 282

Query: 251 KKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRGK 364
           + G+ PD  +   L+ G C + +VD AY   V  M+ K
Sbjct: 283 RSGVEPDLYSYNELLKGFCKANQVDRAYLTMVKRMQTK 320


>gb|EOY00680.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|508708784|gb|EOY00681.1| Pentatricopeptide
           repeat superfamily protein isoform 1 [Theobroma cacao]
           gi|508708785|gb|EOY00682.1| Pentatricopeptide repeat
           superfamily protein isoform 1 [Theobroma cacao]
           gi|508708786|gb|EOY00683.1| Pentatricopeptide repeat
           superfamily protein isoform 1 [Theobroma cacao]
          Length = 516

 Score =  150 bits (379), Expect = 2e-34
 Identities = 71/120 (59%), Positives = 88/120 (73%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           NF  I  L +DMD L  VPDIWAFNIY+NLLC E  ++ AL+V   + +KGR PDVV+YT
Sbjct: 94  NFNFIELLLNDMDKLNYVPDIWAFNIYLNLLCREKKIELALEVFHSLVKKGRDPDVVTYT 153

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRG 361
           I+I GLC+  ++D AV  W+ M+ KG  PDNKAC ALV+GLCD GKVDLAYEL V  ++G
Sbjct: 154 IMIDGLCKAGKFDNAVGFWREMVGKGFRPDNKACCALVVGLCDGGKVDLAYELVVEVIKG 213



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 36/107 (33%), Positives = 54/107 (50%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +LF++M    I PD+  F   +    +E   D A  +L  M   G  PD + YT II  L
Sbjct: 346 KLFEEMGRKGIAPDVVTFTTLIKACLTEGSSDIAKALLDRMSGMGLLPDCIFYTAIIDHL 405

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           C+  + + A  ++  MIK+G+NPD  +  AL+ G C S +   A  L
Sbjct: 406 CKNGKVEMAHSVFDDMIKQGVNPDVVSYNALINGFCKSNRASEAIHL 452



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
 Frame = +2

Query: 8   ELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTII 187
           E+   +FDDM    + PD+ ++N  +N  C  N   +A+ +   M  +G  PD V++ +I
Sbjct: 412 EMAHSVFDDMIKQGVNPDVVSYNALINGFCKSNRASEAIHLYEEMQTRGFSPDEVTFKLI 471

Query: 188 ISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGL--CDSG 316
           I GL R K+  +A ++W  M++KG   D      L+  +   DSG
Sbjct: 472 IGGLIREKKLSKACKVWDQMMEKGFTLDGAVSETLINAIHSVDSG 516



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/103 (31%), Positives = 54/103 (52%)
 Frame = +2

Query: 23  LFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLC 202
           L D M  + ++PD   +   ++ LC    V+ A  V   M ++G  PDVVSY  +I+G C
Sbjct: 382 LLDRMSGMGLLPDCIFYTAIIDHLCKNGKVEMAHSVFDDMIKQGVNPDVVSYNALINGFC 441

Query: 203 RVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLA 331
           +  R  EA+ +++ M  +G +PD    + ++ GL    K+  A
Sbjct: 442 KSNRASEAIHLYEEMQTRGFSPDEVTFKLIIGGLIREKKLSKA 484


>ref|XP_002312667.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222852487|gb|EEE90034.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 512

 Score =  147 bits (371), Expect = 1e-33
 Identities = 69/119 (57%), Positives = 88/119 (73%)
 Frame = +2

Query: 5   FELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTI 184
           F  I  L  DM+ L  VPDIWAFNIY+NLL  EN  + AL+V   M E+GR+PDVV++TI
Sbjct: 95  FTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTI 154

Query: 185 IISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRG 361
           II GLC++K++D AV+ W  M+ KG+ PDNKAC AL +GLCD G+VDLAYEL +G + G
Sbjct: 155 IIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISG 213



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 35/101 (34%), Positives = 53/101 (52%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +LF++M    I PD+  F I +     E   D A K+L LM   G  PD + YT II   
Sbjct: 346 KLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHH 405

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKV 322
           C+  + + A  ++  M++KG+ PD  +  AL+ G C S +V
Sbjct: 406 CKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRV 446



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/107 (28%), Positives = 55/107 (51%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           N ++  +L D M  + ++PD   +   ++  C    V+ A  +   M EKG  PDVVSY 
Sbjct: 375 NSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYN 434

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKV 322
            +I+G C+  R  E + +++ M+++G  PD    + ++  L    K+
Sbjct: 435 ALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKL 481



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/94 (32%), Positives = 49/94 (52%)
 Frame = +2

Query: 59  DIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEAVEMW 238
           D+ ++N  +   CS +    A K+   MG KG  PDVV++TI+I    R    D A ++ 
Sbjct: 324 DVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLL 383

Query: 239 KIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
            +M   GL PD      ++   C SGKV++A+ +
Sbjct: 384 DLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSI 417



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/96 (29%), Positives = 48/96 (50%)
 Frame = +2

Query: 8   ELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTII 187
           E+   +F DM    I PD+ ++N  +N  C    V + + +   M ++G  PD V+Y +I
Sbjct: 412 EMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLI 471

Query: 188 ISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALV 295
           I  L R  +  +A  +W  M+++GL  D      L+
Sbjct: 472 IGALVRENKLSDACRVWDQMMERGLTLDRGISEMLI 507


>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  144 bits (362), Expect = 2e-32
 Identities = 68/126 (53%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           NF  I  L  DM++L  +PDIWAFNIY++LL  E  +D AL+V   + + GR+PDVV+YT
Sbjct: 94  NFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYT 153

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMR- 358
           III G+C++K++D A++ W+ MI KG +PDNKAC A+V+GLCD  KVDLAYEL +  M+ 
Sbjct: 154 IIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKS 213

Query: 359 GKVRFS 376
           G+V+ S
Sbjct: 214 GRVKLS 219



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/110 (28%), Positives = 58/110 (52%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           +F +  +L D M  + + PD   +   ++ LC    V+ A  +   M E+G  PDV+S+ 
Sbjct: 375 SFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFN 434

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLA 331
            +I+G C+  R  EA+ +++ M  +G  PD    + ++ GL +  K+ +A
Sbjct: 435 ALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIA 484



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 34/107 (31%), Positives = 57/107 (53%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +LF++M    I PD+  F I++     +   + A K+L  M E G  PD + YT II  L
Sbjct: 346 KLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHL 405

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           C+  + + A  ++  M+++G++PD  +  AL+ G C   +V  A  L
Sbjct: 406 CKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHL 452



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/117 (29%), Positives = 57/117 (48%)
 Frame = +2

Query: 5   FELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTI 184
           +ELI+   D M S R+      +N  ++  C    +D A  + S M   G +PD+V+Y +
Sbjct: 204 YELII---DVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNV 260

Query: 185 IISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDM 355
            ++  C     D+A ++ K+M + G+ PD  +   L+ G+C     D AY L    M
Sbjct: 261 FLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKM 317



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/98 (32%), Positives = 49/98 (50%)
 Frame = +2

Query: 8   ELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTII 187
           E+   +F DM    I PD+ +FN  +N  C  + V +A+ +   M  +G  PD V+Y +I
Sbjct: 412 EMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLI 471

Query: 188 ISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLG 301
           I GL   K+   A  +W  M+ KG   D    + L+ G
Sbjct: 472 IGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRG 509



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/94 (30%), Positives = 49/94 (52%)
 Frame = +2

Query: 59  DIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEAVEMW 238
           D+ ++N  +   C       A K+   MG+KG  PDVV++TI I        ++ A ++ 
Sbjct: 324 DVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLL 383

Query: 239 KIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
             M + GL+PD      ++  LC SGKV++A+ +
Sbjct: 384 DQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSI 417


>gb|ESW31683.1| hypothetical protein PHAVU_002G258900g [Phaseolus vulgaris]
          Length = 518

 Score =  140 bits (353), Expect = 2e-31
 Identities = 67/123 (54%), Positives = 88/123 (71%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           N  LI  L  DM +L  VPDIWAFN Y++ LC  N ++ AL++   M  +GR+PDVVSYT
Sbjct: 97  NLPLIHDLLLDMHALGFVPDIWAFNTYLSFLCRHNRLETALELFHSMPSEGREPDVVSYT 156

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRG 361
           II+  LC+ +RYDEA  +W+ +  KGL+PD KAC ALV+GLC  G+VDLAYEL VG ++G
Sbjct: 157 IIVDALCKAQRYDEAARVWRGLTGKGLSPDFKACVALVVGLCGGGRVDLAYELVVGVIKG 216

Query: 362 KVR 370
            V+
Sbjct: 217 GVK 219



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 37/110 (33%), Positives = 59/110 (53%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           + +++ +L D+M  L I+PD   +   V+ LC    VD A  V   M E G  PDV+SY 
Sbjct: 377 SIQVVKKLLDEMTRLGILPDRIFYTAVVDHLCKTGKVDTADSVFRDMVENGVNPDVISYN 436

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLA 331
            +++G C+  R  +A+ ++  M + GL PD    + +V GL    K+ LA
Sbjct: 437 ALVNGFCKASRVMDAMRLYDEMQRNGLYPDEVTFKLIVGGLIRGKKLSLA 486



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/100 (33%), Positives = 54/100 (54%)
 Frame = +2

Query: 23  LFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLC 202
           LF++M    I PD+  FNI ++    E  +    K+L  M   G  PD + YT ++  LC
Sbjct: 349 LFEEMCGKGIRPDMVTFNILIDAFLREGSIQVVKKLLDEMTRLGILPDRIFYTAVVDHLC 408

Query: 203 RVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKV 322
           +  + D A  +++ M++ G+NPD  +  ALV G C + +V
Sbjct: 409 KTGKVDTADSVFRDMVENGVNPDVISYNALVNGFCKASRV 448



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
 Frame = +2

Query: 17  LRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDA-LKVLSLMGEKGRQPDVVSYTIIIS 193
           LRL + M+   + PD +++N  +   C  N+VD A L ++  M  KG   DVVSY  +I+
Sbjct: 277 LRLVETMERSGVEPDFYSYNELLKCFCKANMVDRAYLMLVERMQTKG-MCDVVSYNTLIT 335

Query: 194 GLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
             C+V+R     E+++ M  KG+ PD      L+      G + +  +L
Sbjct: 336 AFCKVRRTRRGYELFEEMCGKGIRPDMVTFNILIDAFLREGSIQVVKKL 384



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/91 (34%), Positives = 48/91 (52%)
 Frame = +2

Query: 23  LFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLC 202
           +F DM    + PD+ ++N  VN  C  + V DA+++   M   G  PD V++ +I+ GL 
Sbjct: 419 VFRDMVENGVNPDVISYNALVNGFCKASRVMDAMRLYDEMQRNGLYPDEVTFKLIVGGLI 478

Query: 203 RVKRYDEAVEMWKIMIKKGLNPDNKACRALV 295
           R K+   A  +W  M++KGL  D      LV
Sbjct: 479 RGKKLSLACRVWDQMMEKGLTLDKHLSETLV 509



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/102 (29%), Positives = 52/102 (50%)
 Frame = +2

Query: 59  DIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGLCRVKRYDEAVEMW 238
           +I  +N  ++  C    VD A+K+ + M   G  PD+V+Y  +++  C     DEA+ + 
Sbjct: 221 NILVYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYNTLLNYCCDEGMLDEALRLV 280

Query: 239 KIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRGK 364
           + M + G+ PD  +   L+   C +  VD AY + V  M+ K
Sbjct: 281 ETMERSGVEPDFYSYNELLKCFCKANMVDRAYLMLVERMQTK 322


>ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335822|gb|EFH66239.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 517

 Score =  139 bits (349), Expect = 5e-31
 Identities = 65/118 (55%), Positives = 89/118 (75%)
 Frame = +2

Query: 5   FELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTI 184
           FELI  L  DM++L  +PDIWAFNIY++LLC EN V  A++    M ++GR+PDVVSYTI
Sbjct: 95  FELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTI 154

Query: 185 IISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMR 358
           +I+GL R  +  +AVE+W  MI+ G++PDNKAC ALV+GLC + KVDLAYE+   +++
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIK 212



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 40/121 (33%), Positives = 62/121 (51%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           N +   +LF++M    IV ++  F   +     E     A K+L  M E G  PD + YT
Sbjct: 340 NTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRG 361
            I+  LC+    D+A  ++  MI+  + PD  +  +L+ GLC SG+V  A +L   DM+G
Sbjct: 400 TILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKL-FEDMKG 458

Query: 362 K 364
           K
Sbjct: 459 K 459



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 36/113 (31%), Positives = 57/113 (50%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           N  +  +L D M  L + PD   +   ++ LC    VD A  + + M E    PD +SY 
Sbjct: 375 NSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYN 434

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
            +ISGLCR  R  EA+++++ M  K   PD    + ++ GL    K+  AY++
Sbjct: 435 SLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKV 487



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/102 (30%), Positives = 49/102 (48%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           N +    +F+DM    I PD  ++N  ++ LC    V +A+K+   M  K   PD +++ 
Sbjct: 410 NVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFK 469

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLC 307
            II GL R K+   A ++W  M+ KG   D      L+   C
Sbjct: 470 FIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511


>ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g13040, mitochondrial; Flags: Precursor
           gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis
           thaliana] gi|332190841|gb|AEE28962.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  138 bits (347), Expect = 9e-31
 Identities = 63/118 (53%), Positives = 89/118 (75%)
 Frame = +2

Query: 5   FELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTI 184
           F+LI  L  DM++L  +PDIWAFN+Y++LLC EN V  A++    M ++GR+PDVVSYTI
Sbjct: 95  FDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTI 154

Query: 185 IISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMR 358
           +I+GL R  +  +AVE+W  MI+ G++PDNKAC ALV+GLC + KVDLAYE+   +++
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIK 212



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 38/115 (33%), Positives = 60/115 (52%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           RLF++M    +V ++  +   +     E     A K+L  M E G  PD + YT I+  L
Sbjct: 346 RLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHL 405

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRGK 364
           C+    D+A  ++  MI+  + PD  +  +L+ GLC SG+V  A +L   DM+GK
Sbjct: 406 CKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKL-FEDMKGK 459



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 37/113 (32%), Positives = 57/113 (50%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           N  +  +L D M  L + PD   +   ++ LC    VD A  V + M E    PD +SY 
Sbjct: 375 NSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYN 434

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
            +ISGLCR  R  EA+++++ M  K   PD    + ++ GL    K+  AY++
Sbjct: 435 SLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKV 487



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/102 (30%), Positives = 49/102 (48%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           N +    +F+DM    I PD  ++N  ++ LC    V +A+K+   M  K   PD +++ 
Sbjct: 410 NVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFK 469

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLC 307
            II GL R K+   A ++W  M+ KG   D      L+   C
Sbjct: 470 FIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511


>ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutrema salsugineum]
           gi|557094935|gb|ESQ35517.1| hypothetical protein
           EUTSA_v10007381mg [Eutrema salsugineum]
          Length = 517

 Score =  136 bits (343), Expect = 3e-30
 Identities = 64/118 (54%), Positives = 87/118 (73%)
 Frame = +2

Query: 5   FELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTI 184
           F+LI  L  DM++L  +PDIWAFNIY++LLC E  V  A++    M  +GR+PDVVSYTI
Sbjct: 95  FDLIDALLRDMETLGYIPDIWAFNIYLDLLCREREVGFAVQTFFCMVRRGREPDVVSYTI 154

Query: 185 IISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMR 358
           +I+GL R  +  +AVE W  MI+ G+NPDNKAC +LV+GLCD+ KVDLAYE+   +++
Sbjct: 155 LINGLFRAGKVTDAVEFWNEMIRSGINPDNKACASLVVGLCDARKVDLAYEMVAEEIK 212



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 39/113 (34%), Positives = 58/113 (51%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           N  +  +L D M  L + PD   +   ++ LC    VD A  V + M E G  PD +SY 
Sbjct: 375 NSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHGITPDAISYN 434

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
            +ISGLCR  R  EA++++K M  K   PD    + ++ GL    K+  AY++
Sbjct: 435 ALISGLCRSCRVTEAMKLFKDMQSKECCPDELTFKFIIGGLIREKKLSAAYKV 487



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/115 (33%), Positives = 59/115 (51%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +LF++M    IV ++  +   +     E     A K+L  M E G  PD + YT I+  L
Sbjct: 346 KLFEEMRQKGIVTNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHL 405

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRGK 364
           C+    D+A  ++  MI+ G+ PD  +  AL+ GLC S +V  A +L   DM+ K
Sbjct: 406 CKSGNVDKAYGVFNDMIEHGITPDAISYNALISGLCRSCRVTEAMKL-FKDMQSK 459



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/102 (30%), Positives = 49/102 (48%)
 Frame = +2

Query: 2   NFELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYT 181
           N +    +F+DM    I PD  ++N  ++ LC    V +A+K+   M  K   PD +++ 
Sbjct: 410 NVDKAYGVFNDMIEHGITPDAISYNALISGLCRSCRVTEAMKLFKDMQSKECCPDELTFK 469

Query: 182 IIISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLC 307
            II GL R K+   A ++W  M+ KG   D      L+   C
Sbjct: 470 FIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511


>ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Capsella rubella]
           gi|482573572|gb|EOA37759.1| hypothetical protein
           CARUB_v10012598mg [Capsella rubella]
          Length = 517

 Score =  136 bits (343), Expect = 3e-30
 Identities = 64/118 (54%), Positives = 88/118 (74%)
 Frame = +2

Query: 5   FELILRLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTI 184
           F+LI  L  DM++L  +PDIWAFNIY++LLC EN V  A++    M ++GR+PDVVSYTI
Sbjct: 95  FDLIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTI 154

Query: 185 IISGLCRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMR 358
           +I+GL R  +  +AVE+W  MI+ G+ PDNKAC ALV+GLC + KVDLAYE+   +++
Sbjct: 155 LINGLFRAGKVTDAVEIWNEMIRSGVRPDNKACAALVVGLCHARKVDLAYEMVAEEIK 212



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 37/107 (34%), Positives = 54/107 (50%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +L D M  L + PD   +   +N LC    +D A  V S M E    PD +SY  +I GL
Sbjct: 381 KLLDQMTELGLSPDRIFYTTILNHLCKSGNIDKAYGVFSDMIEHRITPDAISYNSLICGL 440

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYEL 340
           CR  R  EA+++++ M  K   PD    + ++ GL    KV  AY++
Sbjct: 441 CRACRVTEAIKLFEDMQSKECCPDELTFKFIIGGLIRENKVSAAYKV 487



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/115 (30%), Positives = 59/115 (51%)
 Frame = +2

Query: 20  RLFDDMDSLRIVPDIWAFNIYVNLLCSENLVDDALKVLSLMGEKGRQPDVVSYTIIISGL 199
           +LF++M    IV ++  +   +     E     A K+L  M E G  PD + YT I++ L
Sbjct: 346 KLFEEMRQKGIVTNVVTYTSLIKAFLREGKSSVAKKLLDQMTELGLSPDRIFYTTILNHL 405

Query: 200 CRVKRYDEAVEMWKIMIKKGLNPDNKACRALVLGLCDSGKVDLAYELTVGDMRGK 364
           C+    D+A  ++  MI+  + PD  +  +L+ GLC + +V  A +L   DM+ K
Sbjct: 406 CKSGNIDKAYGVFSDMIEHRITPDAISYNSLICGLCRACRVTEAIKL-FEDMQSK 459