BLASTX nr result
ID: Rehmannia23_contig00032783
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00032783
(645 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-... 228 9e-58
ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-... 228 1e-57
gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus pe... 204 1e-50
ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis t... 203 3e-50
ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutr... 202 5e-50
ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arab... 201 2e-49
ref|XP_006606108.1| PREDICTED: DNA mismatch repair protein MSH3-... 200 3e-49
ref|XP_006606107.1| PREDICTED: DNA mismatch repair protein MSH3-... 200 3e-49
ref|XP_006606106.1| PREDICTED: DNA mismatch repair protein MSH3-... 200 3e-49
ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-... 200 3e-49
ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-... 200 3e-49
ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Caps... 200 3e-49
ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-... 198 1e-48
ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-... 198 1e-48
gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis] 195 1e-47
ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-... 195 1e-47
ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-... 194 1e-47
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-... 194 1e-47
emb|CBI37346.3| unnamed protein product [Vitis vinifera] 193 3e-47
emb|CBI29513.3| unnamed protein product [Vitis vinifera] 192 5e-47
>ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
lycopersicum]
Length = 1117
Score = 228 bits (582), Expect = 9e-58
Identities = 133/211 (63%), Positives = 142/211 (67%), Gaps = 14/211 (6%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXPKITTTVSFSPAKRIRTSQLNATHNK 414
MGK KQQVISRFF KI TVSFSPAKR+RTSQL + NK
Sbjct: 1 MGKPKQQVISRFFAPKPKNEEDPSTSTTPCTPPP-KIVATVSFSPAKRLRTSQLISPQNK 59
Query: 413 LQ--------------KLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSNC 276
L KLS LHQKFLD+LLEPS LLEPS+ C
Sbjct: 60 LSSSYDDYPTKPTKTPKLS--THVDNPSTPLPNPTLHQKFLDKLLEPSYHLLEPSK---C 114
Query: 275 TQFQKPKYTPLEQQVVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFL 96
+ PKYTPLEQQVVELK KYPDVLLMIEVGY+YRFFG+DAENAARVLGIYAHMDHNFL
Sbjct: 115 HEIANPKYTPLEQQVVELKTKYPDVLLMIEVGYRYRFFGQDAENAARVLGIYAHMDHNFL 174
Query: 95 TASVPTFRLNVHVRRLVNAGYKVGVVKQTET 3
TASVPTFRLN+HVRRLV+AGYKVGVVKQTET
Sbjct: 175 TASVPTFRLNIHVRRLVSAGYKVGVVKQTET 205
>ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
tuberosum]
Length = 1117
Score = 228 bits (580), Expect = 1e-57
Identities = 133/211 (63%), Positives = 141/211 (66%), Gaps = 14/211 (6%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXPKITTTVSFSPAKRIRTSQLNATHNK 414
MGK KQQVISRFF KI TVSFSPAKR RTSQL + NK
Sbjct: 1 MGKPKQQVISRFFAPKPKNEEDASTLTTPCTPPP-KIAATVSFSPAKRFRTSQLISPQNK 59
Query: 413 LQ--------------KLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSNC 276
L KLS LHQKFLD+LLEPS LLEPS+ C
Sbjct: 60 LSSSYDDHPPKPTKTPKLS--THVDNPPTPLHNPTLHQKFLDKLLEPSYHLLEPSK---C 114
Query: 275 TQFQKPKYTPLEQQVVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFL 96
+ PKYTPLEQQVVELK KYPDVLLMIEVGY+YRFFG+DAENAARVLGIYAHMDHNFL
Sbjct: 115 HEIANPKYTPLEQQVVELKTKYPDVLLMIEVGYRYRFFGQDAENAARVLGIYAHMDHNFL 174
Query: 95 TASVPTFRLNVHVRRLVNAGYKVGVVKQTET 3
TASVPTFRLN+HVRRLV+AGYKVGVVKQTET
Sbjct: 175 TASVPTFRLNIHVRRLVSAGYKVGVVKQTET 205
>gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus persica]
Length = 1096
Score = 204 bits (520), Expect = 1e-50
Identities = 122/212 (57%), Positives = 138/212 (65%), Gaps = 15/212 (7%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXP-------------KITTTVSFSPAK 453
MGKQKQQVISRFF KIT TV+FSP+K
Sbjct: 1 MGKQKQQVISRFFAPKPKTTNPSSSSSSSFPPSSSSSANPHHPPTPPPKITATVNFSPSK 60
Query: 452 R-IRTSQLNATHNKLQKLSH-AXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSN 279
R + +S L ++ K KL + LHQKFL +LLEPS D+ EPS +SN
Sbjct: 61 RTLLSSHLTSSSPKPSKLPKLSPHTHNPIPTAPNPSLHQKFLQKLLEPSSDVPEPSPSSN 120
Query: 278 CTQFQKPKYTPLEQQVVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNF 99
K+TPLEQQVV+LK +YPDVLLM+EVGYKYRFFG+DAE AARVLGIYAHMDHNF
Sbjct: 121 ----PPAKFTPLEQQVVDLKKRYPDVLLMVEVGYKYRFFGQDAEIAARVLGIYAHMDHNF 176
Query: 98 LTASVPTFRLNVHVRRLVNAGYKVGVVKQTET 3
LTASVPTFRLNVHVRRLV+AGYKVGVVKQTET
Sbjct: 177 LTASVPTFRLNVHVRRLVSAGYKVGVVKQTET 208
>ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis thaliana]
gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA
mismatch repair protein MSH3; Short=AtMSH3; AltName:
Full=MutS protein homolog 3 gi|3319876|emb|CAA07684.1|
Msh3 protein [Arabidopsis thaliana]
gi|332659675|gb|AEE85075.1| DNA mismatch repair protein
MSH3 [Arabidopsis thaliana]
Length = 1081
Score = 203 bits (517), Expect = 3e-50
Identities = 118/198 (59%), Positives = 131/198 (66%), Gaps = 1/198 (0%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXPKITTTVSFSPAKR-IRTSQLNATHN 417
MGKQKQQ ISRFF PKI+ TVSFSP+KR + + L A
Sbjct: 1 MGKQKQQTISRFFAPKPKSPTHEPNPVAESSTPPPKISATVSFSPSKRKLLSDHLAAASP 60
Query: 416 KLQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSNCTQFQKPKYTPLEQ 237
K KLS LHQ+FL R LEPS + P +S+ KYTPLEQ
Sbjct: 61 KKPKLS-----PHTQNPVPDPNLHQRFLQRFLEPSPEEYVPETSSS------RKYTPLEQ 109
Query: 236 QVVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASVPTFRLNVHV 57
QVVELK KYPDV+LM+EVGY+YRFFGEDAE AARVLGIYAHMDHNF+TASVPTFRLN HV
Sbjct: 110 QVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASVPTFRLNFHV 169
Query: 56 RRLVNAGYKVGVVKQTET 3
RRLVNAGYK+GVVKQTET
Sbjct: 170 RRLVNAGYKIGVVKQTET 187
>ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutrema salsugineum]
gi|557114467|gb|ESQ54750.1| hypothetical protein
EUTSA_v10024274mg [Eutrema salsugineum]
Length = 1088
Score = 202 bits (515), Expect = 5e-50
Identities = 116/198 (58%), Positives = 131/198 (66%), Gaps = 1/198 (0%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXPKITTTVSFSPAKR-IRTSQLNATHN 417
MGKQKQQVISRFF PKI+ TVSFSP+KR + + L+A
Sbjct: 1 MGKQKQQVISRFFAPKPKSLPQEPNPVAESSTPPPKISATVSFSPSKRKLLSDHLSAASP 60
Query: 416 KLQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSNCTQFQKPKYTPLEQ 237
K KLS LH++FL R LEPS + P +S KYTPLEQ
Sbjct: 61 KKHKLS-----PHTQNPTPDPSLHRRFLQRFLEPSPEESAPESSSR-------KYTPLEQ 108
Query: 236 QVVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASVPTFRLNVHV 57
QVVELK KYPDV+LM+EVGY+YRFFGEDAE AARVLGIYAHMDHNF+TAS+PTFRL HV
Sbjct: 109 QVVELKSKYPDVILMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASIPTFRLQFHV 168
Query: 56 RRLVNAGYKVGVVKQTET 3
RRLVNAGYK+GVVKQTET
Sbjct: 169 RRLVNAGYKIGVVKQTET 186
>ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
lyrata] gi|297313441|gb|EFH43864.1| hypothetical protein
ARALYDRAFT_492273 [Arabidopsis lyrata subsp. lyrata]
Length = 1078
Score = 201 bits (510), Expect = 2e-49
Identities = 117/198 (59%), Positives = 131/198 (66%), Gaps = 1/198 (0%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXPKITTTVSFSPAKR-IRTSQLNATHN 417
MGKQKQQ ISRFF PKI+ TVSFSP+KR + + L A
Sbjct: 1 MGKQKQQTISRFFAPKPKSPTQEPNPVPESSTPPPKISATVSFSPSKRKLLSDHLAAASP 60
Query: 416 KLQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSNCTQFQKPKYTPLEQ 237
K KLS LHQ+FL R LEPS + P +S+ KYTPLEQ
Sbjct: 61 KKPKLS-----PHTQNPIPDPNLHQRFLQRFLEPSPEESVPETSSSSR-----KYTPLEQ 110
Query: 236 QVVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASVPTFRLNVHV 57
QVVELK KYPDV+LM+EVGY+YRFFGEDAE AARVLGIYAHMDH+F+TASVPTFRLN HV
Sbjct: 111 QVVELKRKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHSFMTASVPTFRLNFHV 170
Query: 56 RRLVNAGYKVGVVKQTET 3
RRLVNAGYK+GVVKQTET
Sbjct: 171 RRLVNAGYKIGVVKQTET 188
>ref|XP_006606108.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X5
[Glycine max]
Length = 835
Score = 200 bits (509), Expect = 3e-49
Identities = 117/197 (59%), Positives = 132/197 (67%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXPKITTTVSFSPAKRIRTSQLNATHNK 414
MGKQKQQVISRFF KI+ TV+FSPAKR TS T K
Sbjct: 1 MGKQKQQVISRFFAPKPKSPPPPPPPPP-------KISATVTFSPAKRRLTSNFT-TSRK 52
Query: 413 LQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSNCTQFQKPKYTPLEQQ 234
KLS LHQ+FL +LLEPS P+ +S + P YTPLEQQ
Sbjct: 53 HPKLS------PHTQNPVPPSLHQRFLQKLLEPSTPQQHPASSS-----KPPTYTPLEQQ 101
Query: 233 VVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASVPTFRLNVHVR 54
V++LK K+PDVLLM+EVGYKYRFFG+DAE+A+RVLGIYAHMDHNFLTAS+PTFRLNVHVR
Sbjct: 102 VLDLKAKHPDVLLMVEVGYKYRFFGQDAEHASRVLGIYAHMDHNFLTASIPTFRLNVHVR 161
Query: 53 RLVNAGYKVGVVKQTET 3
RLV AGYKVGVVKQTET
Sbjct: 162 RLVTAGYKVGVVKQTET 178
>ref|XP_006606107.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X4
[Glycine max]
Length = 967
Score = 200 bits (509), Expect = 3e-49
Identities = 117/197 (59%), Positives = 132/197 (67%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXPKITTTVSFSPAKRIRTSQLNATHNK 414
MGKQKQQVISRFF KI+ TV+FSPAKR TS T K
Sbjct: 1 MGKQKQQVISRFFAPKPKSPPPPPPPPP-------KISATVTFSPAKRRLTSNFT-TSRK 52
Query: 413 LQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSNCTQFQKPKYTPLEQQ 234
KLS LHQ+FL +LLEPS P+ +S + P YTPLEQQ
Sbjct: 53 HPKLS------PHTQNPVPPSLHQRFLQKLLEPSTPQQHPASSS-----KPPTYTPLEQQ 101
Query: 233 VVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASVPTFRLNVHVR 54
V++LK K+PDVLLM+EVGYKYRFFG+DAE+A+RVLGIYAHMDHNFLTAS+PTFRLNVHVR
Sbjct: 102 VLDLKAKHPDVLLMVEVGYKYRFFGQDAEHASRVLGIYAHMDHNFLTASIPTFRLNVHVR 161
Query: 53 RLVNAGYKVGVVKQTET 3
RLV AGYKVGVVKQTET
Sbjct: 162 RLVTAGYKVGVVKQTET 178
>ref|XP_006606106.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X3
[Glycine max]
Length = 968
Score = 200 bits (509), Expect = 3e-49
Identities = 117/197 (59%), Positives = 132/197 (67%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXPKITTTVSFSPAKRIRTSQLNATHNK 414
MGKQKQQVISRFF KI+ TV+FSPAKR TS T K
Sbjct: 1 MGKQKQQVISRFFAPKPKSPPPPPPPPP-------KISATVTFSPAKRRLTSNFT-TSRK 52
Query: 413 LQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSNCTQFQKPKYTPLEQQ 234
KLS LHQ+FL +LLEPS P+ +S + P YTPLEQQ
Sbjct: 53 HPKLS------PHTQNPVPPSLHQRFLQKLLEPSTPQQHPASSS-----KPPTYTPLEQQ 101
Query: 233 VVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASVPTFRLNVHVR 54
V++LK K+PDVLLM+EVGYKYRFFG+DAE+A+RVLGIYAHMDHNFLTAS+PTFRLNVHVR
Sbjct: 102 VLDLKAKHPDVLLMVEVGYKYRFFGQDAEHASRVLGIYAHMDHNFLTASIPTFRLNVHVR 161
Query: 53 RLVNAGYKVGVVKQTET 3
RLV AGYKVGVVKQTET
Sbjct: 162 RLVTAGYKVGVVKQTET 178
>ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X2
[Glycine max]
Length = 991
Score = 200 bits (509), Expect = 3e-49
Identities = 117/197 (59%), Positives = 132/197 (67%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXPKITTTVSFSPAKRIRTSQLNATHNK 414
MGKQKQQVISRFF KI+ TV+FSPAKR TS T K
Sbjct: 1 MGKQKQQVISRFFAPKPKSPPPPPPPPP-------KISATVTFSPAKRRLTSNFT-TSRK 52
Query: 413 LQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSNCTQFQKPKYTPLEQQ 234
KLS LHQ+FL +LLEPS P+ +S + P YTPLEQQ
Sbjct: 53 HPKLS------PHTQNPVPPSLHQRFLQKLLEPSTPQQHPASSS-----KPPTYTPLEQQ 101
Query: 233 VVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASVPTFRLNVHVR 54
V++LK K+PDVLLM+EVGYKYRFFG+DAE+A+RVLGIYAHMDHNFLTAS+PTFRLNVHVR
Sbjct: 102 VLDLKAKHPDVLLMVEVGYKYRFFGQDAEHASRVLGIYAHMDHNFLTASIPTFRLNVHVR 161
Query: 53 RLVNAGYKVGVVKQTET 3
RLV AGYKVGVVKQTET
Sbjct: 162 RLVTAGYKVGVVKQTET 178
>ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1
[Glycine max]
Length = 1070
Score = 200 bits (509), Expect = 3e-49
Identities = 117/197 (59%), Positives = 132/197 (67%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXPKITTTVSFSPAKRIRTSQLNATHNK 414
MGKQKQQVISRFF KI+ TV+FSPAKR TS T K
Sbjct: 1 MGKQKQQVISRFFAPKPKSPPPPPPPPP-------KISATVTFSPAKRRLTSNFT-TSRK 52
Query: 413 LQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSNCTQFQKPKYTPLEQQ 234
KLS LHQ+FL +LLEPS P+ +S + P YTPLEQQ
Sbjct: 53 HPKLS------PHTQNPVPPSLHQRFLQKLLEPSTPQQHPASSS-----KPPTYTPLEQQ 101
Query: 233 VVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASVPTFRLNVHVR 54
V++LK K+PDVLLM+EVGYKYRFFG+DAE+A+RVLGIYAHMDHNFLTAS+PTFRLNVHVR
Sbjct: 102 VLDLKAKHPDVLLMVEVGYKYRFFGQDAEHASRVLGIYAHMDHNFLTASIPTFRLNVHVR 161
Query: 53 RLVNAGYKVGVVKQTET 3
RLV AGYKVGVVKQTET
Sbjct: 162 RLVTAGYKVGVVKQTET 178
>ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Capsella rubella]
gi|482551725|gb|EOA15918.1| hypothetical protein
CARUB_v10004012mg [Capsella rubella]
Length = 1182
Score = 200 bits (508), Expect = 3e-49
Identities = 115/198 (58%), Positives = 132/198 (66%), Gaps = 1/198 (0%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXPKITTTVSFSPAKR-IRTSQLNATHN 417
MGKQKQQ ISRFF PKI+ TVSFSP+KR + + L+A
Sbjct: 90 MGKQKQQTISRFFAPKPKSPTEEPIPVAESSSPAPKISATVSFSPSKRKLLSEHLSAASP 149
Query: 416 KLQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSNCTQFQKPKYTPLEQ 237
K KLS LH++FL R LEPS + P+ +S KYTPLEQ
Sbjct: 150 KKPKLS-----PHTQNPIPDPNLHRRFLQRFLEPSPEESVPATSS------ARKYTPLEQ 198
Query: 236 QVVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASVPTFRLNVHV 57
QVVELK KYPDV+LM+EVGY+YRFFGEDAE AARVLGIYAHMDH+F+TAS+PTFRLN HV
Sbjct: 199 QVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHSFMTASIPTFRLNFHV 258
Query: 56 RRLVNAGYKVGVVKQTET 3
RRLVNAGYK+GVVKQTET
Sbjct: 259 RRLVNAGYKIGVVKQTET 276
>ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Cicer
arietinum]
Length = 1076
Score = 198 bits (504), Expect = 1e-48
Identities = 120/198 (60%), Positives = 132/198 (66%), Gaps = 1/198 (0%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXPKITTTVSFSPAKRIRTSQLNATHNK 414
MGKQKQQVISRFF KI++TV+FSP+KR S L + NK
Sbjct: 1 MGKQKQQVISRFFAPKPKTPSSTTASPPSSSTP--KISSTVTFSPSKRRLISHLTSP-NK 57
Query: 413 LQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSNCTQFQKP-KYTPLEQ 237
KLS LH +FL +LLEP+ L S KP K+TPLE
Sbjct: 58 QPKLS--PHTNNPVPSPPNPSLHNRFLHKLLEPTHPQLPSS--------SKPVKFTPLEH 107
Query: 236 QVVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASVPTFRLNVHV 57
QVVELK KYPDVLLMIEVGYKYRFFG+DAENAARVLGIYAHMDHNFLTAS+PTFRLNVHV
Sbjct: 108 QVVELKAKYPDVLLMIEVGYKYRFFGQDAENAARVLGIYAHMDHNFLTASIPTFRLNVHV 167
Query: 56 RRLVNAGYKVGVVKQTET 3
RRLV+AGYKVGVVKQTET
Sbjct: 168 RRLVSAGYKVGVVKQTET 185
>ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
Length = 1094
Score = 198 bits (503), Expect = 1e-48
Identities = 116/206 (56%), Positives = 138/206 (66%), Gaps = 9/206 (4%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXPKITTTVSFSPAKRIRTSQLNAT--- 423
MGKQKQQVISRFF K++ TV+FSP+KR+ +S + +
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSLSSSSSSPA-----KVSATVTFSPSKRLISSAIASQLTP 55
Query: 422 --HNKLQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPS----RNSNCTQFQK 261
+K KLS LHQ+FLD+LLEP+ D +PS R SN K
Sbjct: 56 PKSSKRPKLS--PHTHNPLPSIPNPSLHQRFLDKLLEPTDDSFQPSNQNPRTSNGAD-PK 112
Query: 260 PKYTPLEQQVVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASVP 81
KYTPLEQQVV+LK +YPDVLLM+EVGY+YRFFG+DA AARVLGIYAH+DHNF+TAS+P
Sbjct: 113 YKYTPLEQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAVIAARVLGIYAHLDHNFMTASIP 172
Query: 80 TFRLNVHVRRLVNAGYKVGVVKQTET 3
TFRLNVHVRRLV+AGYKVGVVKQTET
Sbjct: 173 TFRLNVHVRRLVSAGYKVGVVKQTET 198
>gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis]
Length = 1080
Score = 195 bits (495), Expect = 1e-47
Identities = 113/205 (55%), Positives = 131/205 (63%), Gaps = 8/205 (3%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXP--------KITTTVSFSPAKRIRTS 438
MGKQKQQVISRFF KI+ TV+FSP+KR+ +S
Sbjct: 1 MGKQKQQVISRFFAPKPKTPSSSNPSNPSSSSSSLSSLPIPPPKISATVTFSPSKRLLSS 60
Query: 437 QLNATHNKLQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSNCTQFQKP 258
++ +K KL H+KFL +LLEP+ +L E S
Sbjct: 61 SNSSPSSKPPKLPKLSTPTPPPSL------HEKFLQKLLEPTHNLPEKPPPSQAQNGAAV 114
Query: 257 KYTPLEQQVVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASVPT 78
KYTPLEQQVVELK K+PDVLLM+EVGYKYRFFG+DAE AARVLGIYAH+DH+FLTASVPT
Sbjct: 115 KYTPLEQQVVELKRKHPDVLLMVEVGYKYRFFGDDAEIAARVLGIYAHVDHSFLTASVPT 174
Query: 77 FRLNVHVRRLVNAGYKVGVVKQTET 3
FRL+VHVRRLV AGYKVGVVKQTET
Sbjct: 175 FRLSVHVRRLVGAGYKVGVVKQTET 199
>ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-like [Fragaria vesca
subsp. vesca]
Length = 1106
Score = 195 bits (495), Expect = 1e-47
Identities = 114/205 (55%), Positives = 130/205 (63%), Gaps = 8/205 (3%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXP--------KITTTVSFSPAKRIRTS 438
M KQKQQVISRFF KIT TV+FSP+KR+ +S
Sbjct: 1 MKKQKQQVISRFFAPKSKPQNPSFPSSSAPLNPNDPPPPTPPPKITATVAFSPSKRLLSS 60
Query: 437 QLNATHNKLQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSNCTQFQKP 258
L ++ + + H HQKFL +LLEPS + +P SN P
Sbjct: 61 HLTSSPKRPKLSPHTHNPIPTTPNPSL---HQKFLQKLLEPSTSIPQPPPPSN------P 111
Query: 257 KYTPLEQQVVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASVPT 78
K TPLE QVV+LK +YPDVLLM+EVGYKYRFFGEDAE AAR LGIYAHMDH+FLTASVPT
Sbjct: 112 KLTPLELQVVDLKKRYPDVLLMVEVGYKYRFFGEDAEIAARNLGIYAHMDHSFLTASVPT 171
Query: 77 FRLNVHVRRLVNAGYKVGVVKQTET 3
FRLNVHVRRLV+AGYKVGVVKQTET
Sbjct: 172 FRLNVHVRRLVSAGYKVGVVKQTET 196
>ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
Length = 966
Score = 194 bits (494), Expect = 1e-47
Identities = 117/218 (53%), Positives = 138/218 (63%), Gaps = 21/218 (9%)
Frame = -2
Query: 593 MGKQKQQVISRFF------------XXXXXXXXXXXXXXXXXXXXXPKITTTVSFSPAKR 450
MGKQKQQVISRFF K++ TV+FSP+KR
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSLSSSSSSSSSATAADITPPTQPFSPAKVSATVTFSPSKR 60
Query: 449 IRTSQLNA-----THNKLQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPS-- 291
+ +S + + +K KLS LHQ+FLDRLLEP+ D +PS
Sbjct: 61 LISSAIASQLTPPKSSKRPKLS--PHTHNPLPSIPNPSLHQRFLDRLLEPTDDSFQPSNQ 118
Query: 290 --RNSNCTQFQKPKYTPLEQQVVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYA 117
R SN K KYTPLEQQVV+LK +YPDVLLM+EVGY+YRFFG+DA AARVLGIYA
Sbjct: 119 NPRTSNGAD-PKYKYTPLEQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAVIAARVLGIYA 177
Query: 116 HMDHNFLTASVPTFRLNVHVRRLVNAGYKVGVVKQTET 3
H+DHNF+TAS+PTFRLNVHVRRLV+AGYKVGVVKQTET
Sbjct: 178 HLDHNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTET 215
>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
Length = 1137
Score = 194 bits (494), Expect = 1e-47
Identities = 117/214 (54%), Positives = 137/214 (64%), Gaps = 17/214 (7%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXP-------------KITTTVSFSPAK 453
MGKQKQQVISRFF P KI+TTV+FSP+K
Sbjct: 1 MGKQKQQVISRFFAPKPKAPSSSSSSIPSSPSPSPSPSSLPNPPTPPPKISTTVTFSPSK 60
Query: 452 RIRTSQLNATHN--KLQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSN 279
R+ +S ++ + K K+SH HQKF+ +LLEPS +S
Sbjct: 61 RLPSSHVSPSTKPPKAPKISHPIDPSL----------HQKFVQKLLEPS--------SST 102
Query: 278 CTQFQKP--KYTPLEQQVVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDH 105
T+ P KYTPLEQQVV+LK KYPDVLLM+EVGY+YRFFGEDAE AARVLGIYAH+DH
Sbjct: 103 PTKLPLPTTKYTPLEQQVVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAARVLGIYAHVDH 162
Query: 104 NFLTASVPTFRLNVHVRRLVNAGYKVGVVKQTET 3
NFLTAS+PTFRLNVHVRRLV+AG+KVGVVKQTET
Sbjct: 163 NFLTASIPTFRLNVHVRRLVSAGFKVGVVKQTET 196
>emb|CBI37346.3| unnamed protein product [Vitis vinifera]
Length = 490
Score = 193 bits (491), Expect = 3e-47
Identities = 116/214 (54%), Positives = 137/214 (64%), Gaps = 17/214 (7%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXP-------------KITTTVSFSPAK 453
MGKQKQQVISRFF P KI+TTV+FSP+K
Sbjct: 1 MGKQKQQVISRFFAPKSKAPSSSSSSIPSSPSPSPSPSSLPNPPTPPPKISTTVTFSPSK 60
Query: 452 RIRTSQLNATHN--KLQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRNSN 279
R+ +S ++ + K K+SH HQKF+ +LL+PS +S
Sbjct: 61 RLPSSHVSPSTKPPKAPKISHPIDPSL----------HQKFVQKLLQPS--------SST 102
Query: 278 CTQFQKP--KYTPLEQQVVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDH 105
T+ P KYTPLEQQVV+LK KYPDVLLM+EVGY+YRFFGEDAE AARVLGIYAH+DH
Sbjct: 103 PTKLPLPTTKYTPLEQQVVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAARVLGIYAHVDH 162
Query: 104 NFLTASVPTFRLNVHVRRLVNAGYKVGVVKQTET 3
NFLTAS+PTFRLNVHVRRLV+AG+KVGVVKQTET
Sbjct: 163 NFLTASIPTFRLNVHVRRLVSAGFKVGVVKQTET 196
>emb|CBI29513.3| unnamed protein product [Vitis vinifera]
Length = 470
Score = 192 bits (489), Expect = 5e-47
Identities = 117/216 (54%), Positives = 136/216 (62%), Gaps = 19/216 (8%)
Frame = -2
Query: 593 MGKQKQQVISRFFXXXXXXXXXXXXXXXXXXXXXP---------------KITTTVSFSP 459
MGKQKQQVISRFF P KI+TTV+FSP
Sbjct: 1 MGKQKQQVISRFFAPKSKAPSSSSFSIPSSPSPSPSPSPSSLPNPPTPPPKISTTVTFSP 60
Query: 458 AKRIRTSQLNATHN--KLQKLSHAXXXXXXXXXXXXXXLHQKFLDRLLEPSQDLLEPSRN 285
+KR+ +S ++ + K K+SH HQKFL +LLEPS +
Sbjct: 61 SKRLPSSHVSPSTKPPKAPKISHPIDPSL----------HQKFLQKLLEPS--------S 102
Query: 284 SNCTQFQKP--KYTPLEQQVVELKDKYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHM 111
S T+ P KYTPLEQQVV+LK KYPDVLLM+EVGY+YRFFGEDAE AARVL IYAH+
Sbjct: 103 STPTKLPLPTTKYTPLEQQVVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAARVLAIYAHV 162
Query: 110 DHNFLTASVPTFRLNVHVRRLVNAGYKVGVVKQTET 3
DHNFLTAS+PTFRLNVHVRRLV+AG+KVGVVKQTET
Sbjct: 163 DHNFLTASIPTFRLNVHVRRLVSAGFKVGVVKQTET 198