BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00032118
         (973 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]          87   1e-14
emb|CAE01996.2| OSJNBb0033G08.12 [Oryza sativa Japonica Group]         74   1e-14
gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subc...    71   2e-14
gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Jap...    72   3e-14
gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Jap...    72   3e-14
gb|AAO37471.1| putative polyprotein [Oryza sativa Japonica Group...    72   4e-14
ref|XP_006472991.1| PREDICTED: uncharacterized protein LOC102614...    84   6e-14
ref|XP_006490831.1| PREDICTED: uncharacterized protein LOC102615...    84   8e-14
ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623...    84   8e-14
dbj|BAB39950.1| putative polyprotein [Oryza sativa Japonica Group]     70   1e-13
emb|CAE02456.1| OSJNBa0042D13.9 [Oryza sativa Japonica Group]          67   3e-13
gb|ABA93911.1| retrotransposon protein, putative, Ty3-gypsy subc...    71   4e-13
gb|AAV32123.1| putative polyprotein [Oryza sativa Japonica Group]      71   4e-13
emb|CAD40750.1| OSJNBa0081G05.3 [Oryza sativa Japonica Group]          67   4e-13
emb|CAH66306.1| OSIGBa0135K14.3 [Oryza sativa Indica Group] gi|1...    67   4e-13
gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subc...    68   1e-12
gb|AAL58173.1|AC093181_19 putative polyprotein [Oryza sativa Jap...    68   1e-12
gb|AAO73254.1| putative GAG-POL precursor [Oryza sativa Japonica...    68   1e-12
gb|AAV24920.1| putative polyprotein [Oryza sativa Japonica Group...    69   1e-12
gb|ABA93648.1| retrotransposon protein, putative, Ty3-gypsy subc...    70   1e-12

>emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]
          Length = 1455

 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 15/237 (6%)
 Frame = +3

Query: 117 QEEEQMIHMKASNFEKMLEKMLEDRKKKSKKAMEA-------PPQDP--PGEGGNVEKRN 269
           +E    +H+  S  + +LE   E R  +  +  EA       PP  P  P  GG +  R+
Sbjct: 28  EETSTEVHLTMSELDCLLETAAE-RGARRIRQQEARTRGRWIPPLSPSAPASGG-MHARS 85

Query: 270 E---VPDDLEEVASQXXXXXXXXXXXXXXXXXNKPRDIHELSEQIEHVTRQLDDLRRRGA 440
           E   +  + ++  S+                     +  +    +  + R++  L R   
Sbjct: 86  EPRRLRAEAKQTFSRGERPIGSHRNGTYRPFPGMDNNNQQFINMVTELKREVQALNRDRD 145

Query: 441 VTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNR---DPQEHLTAFDHMMQLYGQSD 611
            T++  + GSPF+P ILA  +  + +L +   Y G+R   DP++H+  F  +M +    D
Sbjct: 146 GTAEEDEMGSPFAPHILAPEIPVSMRLSNPVVYTGDRNARDPRDHINQFLAVMDILSTPD 205

Query: 612 AMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTI 782
                IF +TLTG+AQ WF  LPRG++ S+++L   F+ QFA  +R  ++  HL T+
Sbjct: 206 HALCWIFRSTLTGRAQAWFSQLPRGSIRSFDELRELFVRQFACNRRYPKTIGHLMTM 262


>emb|CAE01996.2| OSJNBb0033G08.12 [Oryza sativa Japonica Group]
          Length = 1847

 Score = 73.6 bits (179), Expect(2) = 1e-14
 Identities = 36/121 (29%), Positives = 62/121 (51%)
 Frame = +3

Query: 426 RRRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNRDPQEHLTAFDHMMQLYGQ 605
           +++GAV     ++G P S  I    + P FK P +P+Y G  DP+E L+ ++  ++    
Sbjct: 402 QQQGAVNRAGGEKGLPLSGGIKTRPIPPQFKFPPVPRYSGETDPKEFLSIYESAIEAAHG 461

Query: 606 SDAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTIR 785
            +   A++    L G A+ W+  LP  ++ S+EQL   F+  F    +  ++  HL  IR
Sbjct: 462 DENTKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYKEPKTQQHLLGIR 521

Query: 786 Q 788
           Q
Sbjct: 522 Q 522



 Score = 33.5 bits (75), Expect(2) = 1e-14
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLMEV 963
           +S RE++ RF+    +VQD+    + N    GL +G L   +A + P   E L+ +
Sbjct: 526 ESIREYMRRFSQARCQVQDITKASVINAASAGLLEGELTRKIANKEPQTLEHLLRI 581


>gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1767

 Score = 71.2 bits (173), Expect(2) = 2e-14
 Identities = 36/120 (30%), Positives = 59/120 (49%)
 Frame = +3

Query: 429 RRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNRDPQEHLTAFDHMMQLYGQS 608
           ++GAV     ++G P S  I    + P FK P +P+Y G  DP+E L+ ++  ++     
Sbjct: 292 QQGAVNRAGGEKGLPLSGGIKTRPIPPQFKFPPVPRYSGETDPKEFLSIYESAIEAAHGD 351

Query: 609 DAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTIRQ 788
           +   A +    L G A+ W+  LP  ++ S+EQL   F+  F       ++  HL  IRQ
Sbjct: 352 ENTKAMVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQ 411



 Score = 35.4 bits (80), Expect(2) = 2e-14
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLMEVT 966
           +S RE++ RF+    +VQD+    + N    GL +G L   +A + P   E L+ +T
Sbjct: 415 ESIREYMRRFSQARCQVQDITEASVINAASAGLLEGELTRKIANKEPQTLEHLLRIT 471


>gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Japonica Group]
           gi|31431922|gb|AAP53628.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 1292

 Score = 72.0 bits (175), Expect(2) = 3e-14
 Identities = 36/120 (30%), Positives = 60/120 (50%)
 Frame = +3

Query: 429 RRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNRDPQEHLTAFDHMMQLYGQS 608
           ++GAV     ++G P S  I    + P FK P +P+Y G  DP+E L+ ++  ++     
Sbjct: 35  QQGAVNRAGGEKGLPLSGGIKTRPIPPQFKFPPVPRYSGETDPKEFLSIYESAIEAAHGD 94

Query: 609 DAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTIRQ 788
           +   A++    L G A+ W+  LP  ++ S+EQL   F+  F       ++  HL  IRQ
Sbjct: 95  ENTKAKVIHLALDGIARSWYFNLPDNSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQ 154



 Score = 33.5 bits (75), Expect(2) = 3e-14
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLM 957
           +S RE++ RF+    +VQD+    + N    GL +G L   +A + P+  E L+
Sbjct: 158 ESIREYMRRFSQARCQVQDITEASVINAASAGLLEGELTRKIANKEPLTLEHLL 211


>gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1291

 Score = 72.0 bits (175), Expect(2) = 3e-14
 Identities = 36/120 (30%), Positives = 60/120 (50%)
 Frame = +3

Query: 429 RRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNRDPQEHLTAFDHMMQLYGQS 608
           ++GAV     ++G P S  I    + P FK P +P+Y G  DP+E L+ ++  ++     
Sbjct: 35  QQGAVNRAGGEKGLPLSGGIKTRPIPPQFKFPPVPRYSGETDPKEFLSIYESAIEAAHGD 94

Query: 609 DAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTIRQ 788
           +   A++    L G A+ W+  LP  ++ S+EQL   F+  F       ++  HL  IRQ
Sbjct: 95  ENTKAKVIHLALDGIARSWYFNLPDNSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQ 154



 Score = 33.5 bits (75), Expect(2) = 3e-14
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLM 957
           +S RE++ RF+    +VQD+    + N    GL +G L   +A + P+  E L+
Sbjct: 158 ESIREYMRRFSQARCQVQDITEASVINAASAGLLEGELTRKIANKEPLTLEHLL 211


>gb|AAO37471.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|41393196|gb|AAS01919.1| putative polyprotein [Oryza
           sativa Japonica Group] gi|108709171|gb|ABF96966.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1535

 Score = 72.4 bits (176), Expect(2) = 4e-14
 Identities = 36/120 (30%), Positives = 60/120 (50%)
 Frame = +3

Query: 429 RRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNRDPQEHLTAFDHMMQLYGQS 608
           ++GAV     ++G P S  I    + P FK P +P+Y G  DP+E L+ ++  ++     
Sbjct: 292 QQGAVNRAGGEKGLPLSGGIKTRPIPPQFKFPPVPRYSGETDPKEFLSIYESAIEAAHGD 351

Query: 609 DAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTIRQ 788
           +   A++    L G A+ W+  LP  ++ S+EQL   F+  F       ++  HL  IRQ
Sbjct: 352 ENTKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQ 411



 Score = 32.7 bits (73), Expect(2) = 4e-14
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLMEV 963
           +S RE++ RF+    +VQD+    + N    GL +G L   +A + P   E L+ +
Sbjct: 415 ESIREYMRRFSQARCQVQDIIEASVINAASAGLLEGELTRKIANKEPQTLEHLLRI 470


>ref|XP_006472991.1| PREDICTED: uncharacterized protein LOC102614032 [Citrus sinensis]
          Length = 497

 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 44/144 (30%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
 Frame = +3

Query: 378 ELSEQIEHVTRQLDDL--RRRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNR 551
           +L E++  + + +DD+  R R      +    SP + EI+  V+  +F+LPDL +Y G  
Sbjct: 151 QLEEEVRRLAQIIDDMQGRNRAPGWRIMLDGESPLAAEIMRAVIPRDFRLPDL-RYSGRT 209

Query: 552 DPQEHLTAFDHMMQLYGQSDAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQ 731
           DP  H+  F+ +  + G S +   R+F  +L G+A+EW+  LPRG++ ++EQ+ ++F  Q
Sbjct: 210 DPLVHIERFNDITGVQGLSQSQRCRVFPLSLEGRAREWYRKLPRGSIKTFEQMCQEFAEQ 269

Query: 732 FASQKRTRRSASHLFTIRQGVKVT 803
           F+           L +++QG + T
Sbjct: 270 FSGAMAPEDDMMELKSMKQGEQET 293


>ref|XP_006490831.1| PREDICTED: uncharacterized protein LOC102615566 [Citrus sinensis]
          Length = 593

 Score = 84.0 bits (206), Expect = 8e-14
 Identities = 44/144 (30%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
 Frame = +3

Query: 378 ELSEQIEHVTRQLDDL--RRRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNR 551
           +L E++  + + +DD+  R R      +    SP + EI+  V+  +F+LPDL +Y G  
Sbjct: 48  QLEEEVRRLAQIIDDMQGRNRAPGWRIMLDGESPLAAEIMRAVIPRDFRLPDL-RYSGRT 106

Query: 552 DPQEHLTAFDHMMQLYGQSDAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQ 731
           DP  H+  F+ +  + G S +   R+F  +L G+A+EW+  LPRG++ ++EQ+ ++F  Q
Sbjct: 107 DPLVHIERFNDITGVQGLSPSQRCRVFPLSLEGRAREWYRKLPRGSIKTFEQMCQEFAEQ 166

Query: 732 FASQKRTRRSASHLFTIRQGVKVT 803
           F+           L +++QG + T
Sbjct: 167 FSGAMSPEDDMMELKSMKQGEQET 190


>ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623105 [Citrus sinensis]
          Length = 1407

 Score = 84.0 bits (206), Expect = 8e-14
 Identities = 44/144 (30%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
 Frame = +3

Query: 378 ELSEQIEHVTRQLDDL--RRRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNR 551
           +L E++  + + +DD+  R R      +    SP + EI+  V+  +F+LPDL +Y G  
Sbjct: 180 QLEEEVRRLAQIIDDMQGRNRAPGWRIMLDGESPLAAEIMRAVIPRDFRLPDL-RYSGRT 238

Query: 552 DPQEHLTAFDHMMQLYGQSDAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQ 731
           DP  H+  F+ +  + G S +   R+F  +L G+A+EW+  LPRG++ ++EQ+ ++F  Q
Sbjct: 239 DPLMHIERFNDITGVQGLSPSQRCRVFPLSLEGRAREWYRKLPRGSIKTFEQMCQEFAEQ 298

Query: 732 FASQKRTRRSASHLFTIRQGVKVT 803
           F+           L +++QG + T
Sbjct: 299 FSGAMSPEDDMMELKSMKQGEQET 322


>dbj|BAB39950.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1579

 Score = 70.1 bits (170), Expect(2) = 1e-13
 Identities = 36/120 (30%), Positives = 59/120 (49%)
 Frame = +3

Query: 429 RRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNRDPQEHLTAFDHMMQLYGQS 608
           ++ AV     ++G P S  I    + P FK P +P Y G  DP+E L+ ++  ++     
Sbjct: 35  QQSAVNRAGGEKGLPLSGGIKTRPIPPQFKFPPVPCYSGETDPKEFLSIYESAIEAAHGD 94

Query: 609 DAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTIRQ 788
           +   A++   TL G A+ W+  LP  ++ S+EQL   F+  F       ++  HL  IRQ
Sbjct: 95  ENTKAKVIHLTLDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQ 154



 Score = 33.9 bits (76), Expect(2) = 1e-13
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLMEV 963
           +S RE++ RF+    +VQD+    + N    GL +G L   +A + P   +QL+ +
Sbjct: 158 ESIREYMRRFSQARCQVQDITEASVINAASAGLLEGELTRKIANKEPQTLKQLLRI 213


>emb|CAE02456.1| OSJNBa0042D13.9 [Oryza sativa Japonica Group]
          Length = 303

 Score = 67.0 bits (162), Expect(2) = 3e-13
 Identities = 34/120 (28%), Positives = 58/120 (48%)
 Frame = +3

Query: 429 RRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNRDPQEHLTAFDHMMQLYGQS 608
           ++ AV     ++G P S  I    + P FK P + +Y G  DP+E L+ ++  ++     
Sbjct: 35  QQSAVNRAGGEKGLPLSGGIKTRPIPPQFKFPPVSRYSGETDPKEFLSIYESAIEAAHGD 94

Query: 609 DAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTIRQ 788
           +   A++    L G A+ W+  LP  ++ S+EQL   F+  F       ++  HL  IRQ
Sbjct: 95  ENTKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQ 154



 Score = 35.4 bits (80), Expect(2) = 3e-13
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLMEV 963
           +S RE++ RF+    +VQD+    + N  + GL +G L   +A + P   E L+ +
Sbjct: 158 ESIREYMRRFSQARCQVQDITEASVINAALAGLLEGELTKKIANKEPQTLEHLLRI 213


>gb|ABA93911.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 1361

 Score = 70.9 bits (172), Expect(2) = 4e-13
 Identities = 36/120 (30%), Positives = 59/120 (49%)
 Frame = +3

Query: 429 RRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNRDPQEHLTAFDHMMQLYGQS 608
           ++GAV     ++G P S  I    + P FK P +P+Y G  DP+E L+ ++  ++     
Sbjct: 321 QQGAVNRAGGEKGLPLSGGIKIRPIPPQFKFPPVPRYSGETDPKEFLSIYESAIEASHGD 380

Query: 609 DAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTIRQ 788
               A++    L G A  W+  LP  ++ S+EQL   F++ F       ++  HL  IRQ
Sbjct: 381 KNTKAKVIHLALDGIACSWYFNLPANSIYSWEQLRDVFVFNFRGTYEEPKTQQHLLGIRQ 440



 Score = 31.2 bits (69), Expect(2) = 4e-13
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLMEV 963
           +S RE++ RF+    +VQD+    + N     L +G L   +A + P   E L+ +
Sbjct: 444 ESIREYMRRFSQARCQVQDITEASVINAASASLLEGELTRKIANKEPQTLEHLLRI 499


>gb|AAV32123.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1242

 Score = 71.2 bits (173), Expect(2) = 4e-13
 Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 8/138 (5%)
 Frame = +3

Query: 399 HVTRQLDDLRR----RGAVTSDLQK----RGSPFSPEILAEVVTPNFKLPDLPKYDGNRD 554
           H   Q  DLRR    R + +S L +    +G P S  +    + P FK P +P+Y G  D
Sbjct: 216 HQFSQARDLRRGVKDRSSTSSTLLRAGGEKGLPLSGGVKTRPIPPQFKFPPVPRYSGETD 275

Query: 555 PQEHLTAFDHMMQLYGQSDAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQF 734
           P+E L+ +   ++     +   A++    L G A+ W+  LP  ++ S+EQL   F+  F
Sbjct: 276 PKEFLSIYKSAIKAAHGDEITKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNF 335

Query: 735 ASQKRTRRSASHLFTIRQ 788
                  ++  HL  IRQ
Sbjct: 336 RGTYEEPKTQQHLLGIRQ 353



 Score = 30.8 bits (68), Expect(2) = 4e-13
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLMEV 963
           +S RE++ RF+    +VQD+    + N     L +G L   +A + P   E L+ +
Sbjct: 357 ESIREYMRRFSQAQCQVQDITEASVINAASASLLEGELIRKIANKEPQTLEHLLRI 412


>emb|CAD40750.1| OSJNBa0081G05.3 [Oryza sativa Japonica Group]
          Length = 555

 Score = 67.0 bits (162), Expect(2) = 4e-13
 Identities = 35/120 (29%), Positives = 58/120 (48%)
 Frame = +3

Query: 429 RRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNRDPQEHLTAFDHMMQLYGQS 608
           ++GAV     ++G   S  I    + P FK P +P+Y G  DP+E L+ ++  ++     
Sbjct: 236 QQGAVNRTGGEKGLLLSGGIKTRPIPPQFKFPPVPRYSGEIDPKEFLSIYESAIEAAHGD 295

Query: 609 DAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTIRQ 788
           +   A++    L G A+ W+  LP  +  S+EQL   F+  F       ++  HL  IRQ
Sbjct: 296 ENTKAKVIHLALDGIARSWYFNLPANSNYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQ 355



 Score = 35.0 bits (79), Expect(2) = 4e-13
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLMEVTQK 972
           +S RE++ RF+    +VQD+    + N  + GL +G L   +A + P   E L+ +  +
Sbjct: 359 ESIREYMRRFSQARCQVQDITEASVINAALAGLVEGELTRNIANKEPQTLEHLLRIIDR 417


>emb|CAH66306.1| OSIGBa0135K14.3 [Oryza sativa Indica Group]
           gi|116309231|emb|CAH66321.1| OSIGBa0150M16.4 [Oryza
           sativa Indica Group]
          Length = 555

 Score = 67.0 bits (162), Expect(2) = 4e-13
 Identities = 35/120 (29%), Positives = 58/120 (48%)
 Frame = +3

Query: 429 RRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNRDPQEHLTAFDHMMQLYGQS 608
           ++GAV     ++G   S  I    + P FK P +P+Y G  DP+E L+ ++  ++     
Sbjct: 236 QQGAVNRTGGEKGLLLSGGIKTRPIPPQFKFPPVPRYSGEIDPKEFLSIYESAIEAAHGD 295

Query: 609 DAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTIRQ 788
           +   A++    L G A+ W+  LP  +  S+EQL   F+  F       ++  HL  IRQ
Sbjct: 296 ENTKAKVIHLALDGIARSWYFNLPANSNYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQ 355



 Score = 35.0 bits (79), Expect(2) = 4e-13
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLMEVTQK 972
           +S RE++ RF+    +VQD+    + N  + GL +G L   +A + P   E L+ +  +
Sbjct: 359 ESIREYMRRFSQARCQVQDITEASVINAALAGLVEGELTRNIANKEPQTLEHLLRIIDR 417


>gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 2035

 Score = 67.8 bits (164), Expect(2) = 1e-12
 Identities = 34/120 (28%), Positives = 59/120 (49%)
 Frame = +3

Query: 429 RRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNRDPQEHLTAFDHMMQLYGQS 608
           ++GA      ++G P S  I    + P FK P +P+Y G  DP+E L+ ++  +++    
Sbjct: 482 QQGAANRAGGEKGLPLSGGIKTRPIPPQFKFPPVPRYSGETDPKEFLSIYESAIEVAHGD 541

Query: 609 DAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTIRQ 788
           +   A++    L G A+ W+  L   ++ S+EQL   F+  F       ++  HL  IRQ
Sbjct: 542 ENTKAKVIHLALDGIARSWYFNLLANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQ 601



 Score = 32.7 bits (73), Expect(2) = 1e-12
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLMEV 963
           +S RE++ RF+     VQD+    + N    GL +G L   +A + P   E L+ +
Sbjct: 605 ESIREYMRRFSQARCHVQDITEASVINATSAGLLEGELTRKIANKEPQTLEHLLRI 660


>gb|AAL58173.1|AC093181_19 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1931

 Score = 67.8 bits (164), Expect(2) = 1e-12
 Identities = 34/120 (28%), Positives = 59/120 (49%)
 Frame = +3

Query: 429 RRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNRDPQEHLTAFDHMMQLYGQS 608
           ++GA      ++G P S  I    + P FK P +P+Y G  DP+E L+ ++  +++    
Sbjct: 482 QQGAANRAGGEKGLPLSGGIKTRPIPPQFKFPPVPRYSGETDPKEFLSIYESAIEVAHGD 541

Query: 609 DAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTIRQ 788
           +   A++    L G A+ W+  L   ++ S+EQL   F+  F       ++  HL  IRQ
Sbjct: 542 ENTKAKVIHLALDGIARSWYFNLLANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQ 601



 Score = 32.7 bits (73), Expect(2) = 1e-12
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLMEV 963
           +S RE++ RF+     VQD+    + N    GL +G L   +A + P   E L+ +
Sbjct: 605 ESIREYMRRFSQARCHVQDITEASVINATSAGLLEGELTRKIANKEPQTLEHLLRI 660


>gb|AAO73254.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
           gi|108709218|gb|ABF97013.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 908

 Score = 67.8 bits (164), Expect(2) = 1e-12
 Identities = 35/120 (29%), Positives = 59/120 (49%)
 Frame = +3

Query: 429 RRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNRDPQEHLTAFDHMMQLYGQS 608
           ++GAV     ++G P S  I    + P FK P +P+Y G  D +E L+ ++  ++     
Sbjct: 343 QQGAVNRAGSEKGLPLSGGIKTCPIPPQFKFPPVPRYSGETDLKEFLSIYESAIEAAHGD 402

Query: 609 DAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTIRQ 788
           +   A++    L G A+ W+  LP  ++ S+EQL   F+  F       ++  HL  IRQ
Sbjct: 403 ENTKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQ 462



 Score = 32.7 bits (73), Expect(2) = 1e-12
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLMEV 963
           +S RE++ RF+    +VQD+    + N    GL +G L   +A + P   E L+ +
Sbjct: 466 ESIREYMRRFSQAWCQVQDITEASVINAASAGLLEGELTRKIANKEPQTLEHLLRI 521


>gb|AAV24920.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|55733857|gb|AAV59364.1| unknown protein [Oryza sativa
           Japonica Group]
          Length = 1279

 Score = 68.9 bits (167), Expect(2) = 1e-12
 Identities = 35/120 (29%), Positives = 59/120 (49%)
 Frame = +3

Query: 429 RRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNRDPQEHLTAFDHMMQLYGQS 608
           ++GAV     ++G   S  I    + P FK P +P+Y G  DP+E L+ ++  ++     
Sbjct: 302 QQGAVNRTGGEKGLLLSGGIKTRPIPPQFKFPPVPRYSGETDPKEFLSIYESAIEAAHGD 361

Query: 609 DAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTIRQ 788
           +   A++    L G A+ W+  LP  ++ S+EQL   F+  F       ++  HL  IRQ
Sbjct: 362 ENTKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQ 421



 Score = 31.2 bits (69), Expect(2) = 1e-12
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLMEV 963
           +S RE++ RF+    +VQD+    + N    GL +G L   +  + P   E L+ +
Sbjct: 425 ESIREYMRRFSQAWCQVQDITEASVINAASAGLLEGELTRKITNKEPQTLEHLLRI 480


>gb|ABA93648.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 595

 Score = 70.5 bits (171), Expect(2) = 1e-12
 Identities = 36/120 (30%), Positives = 58/120 (48%)
 Frame = +3

Query: 429 RRGAVTSDLQKRGSPFSPEILAEVVTPNFKLPDLPKYDGNRDPQEHLTAFDHMMQLYGQS 608
           ++GAV     ++G P S  I    + P FK P +P Y G  DP+E L+ ++  ++     
Sbjct: 318 QQGAVNRAGGEKGLPLSGGIKTRPIPPQFKFPPIPHYSGETDPKEFLSIYESAIEAAHGD 377

Query: 609 DAMNARIFITTLTGKAQEWFMGLPRGTMVSYEQLARKFLYQFASQKRTRRSASHLFTIRQ 788
               A++    L G A+ W+  LP  ++ S+EQL   F+  F       ++  HL  IRQ
Sbjct: 378 KNTKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQ 437



 Score = 29.6 bits (65), Expect(2) = 1e-12
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +1

Query: 796 KSHREFINRFNDEALEVQDMRIDMMTNILILGLQKGPLASALAREPPVDKEQLMEV 963
           +S RE++  F+    +VQD+    + N    GL +G L   +  + P   E L+ +
Sbjct: 441 ESIREYMRHFSQARCQVQDITEVSVINAASAGLLEGELTRKITNKEPQTLEHLLRI 496