BLASTX nr result
ID: Rehmannia23_contig00031929
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00031929
(634 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo... 86 9e-15
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 86 9e-15
ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis ... 86 1e-14
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 85 2e-14
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 85 2e-14
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 85 2e-14
gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indi... 84 3e-14
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 84 4e-14
gb|EMJ05203.1| hypothetical protein PRUPE_ppa025711mg, partial [... 81 2e-13
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 80 5e-13
gb|EEE57938.1| hypothetical protein OsJ_08648 [Oryza sativa Japo... 80 6e-13
gb|EEC74135.1| hypothetical protein OsI_09205 [Oryza sativa Indi... 80 6e-13
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo... 79 8e-13
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g... 79 8e-13
gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [... 78 2e-12
ref|NP_189164.1| ribonuclease H-like protein [Arabidopsis thalia... 78 2e-12
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 78 2e-12
ref|XP_002454801.1| hypothetical protein SORBIDRAFT_04g037700 [S... 77 4e-12
ref|XP_003562103.1| PREDICTED: uncharacterized protein LOC100844... 77 5e-12
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ... 76 7e-12
>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
Length = 639
Score = 85.9 bits (211), Expect = 9e-15
Identities = 45/121 (37%), Positives = 61/121 (50%)
Frame = +3
Query: 6 DIMWSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFF 185
D W + WK+ V GKIKHFLWR CH+ LA + L+ +G+ +D C CG ED H+FF
Sbjct: 239 DDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFF 298
Query: 186 NCERAKIIWKLSPVNWEGLRDFTDSFPKWWMQVCQISRGGCVVDRIQLTTYLLWWLWKSR 365
C+ K +W+ +N E LR + V Q ++R LW WK R
Sbjct: 299 KCKPVKKVWQ--ALNLEELRSMLEQQTS-GKNVLQSIYCRPEIERTS-AIVCLWQWWKER 354
Query: 366 N 368
N
Sbjct: 355 N 355
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 85.9 bits (211), Expect = 9e-15
Identities = 45/121 (37%), Positives = 61/121 (50%)
Frame = +3
Query: 6 DIMWSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFF 185
D W + WK+ V GKIKHFLWR CH+ LA + L+ +G+ +D C CG ED H+FF
Sbjct: 1272 DDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFF 1331
Query: 186 NCERAKIIWKLSPVNWEGLRDFTDSFPKWWMQVCQISRGGCVVDRIQLTTYLLWWLWKSR 365
C+ K +W+ +N E LR + V Q ++R LW WK R
Sbjct: 1332 KCKPVKKVWQ--ALNLEELRSMLEQQTS-GKNVLQSIYCRPEIERTS-AIVCLWQWWKER 1387
Query: 366 N 368
N
Sbjct: 1388 N 1388
>ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|3184275|gb|AAC18922.1| putative reverse transcriptase
[Arabidopsis thaliana] gi|330250513|gb|AEC05607.1| RNase
H domain-containing protein [Arabidopsis thaliana]
Length = 365
Score = 85.5 bits (210), Expect = 1e-14
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Frame = +3
Query: 27 WKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFFNCERAKI 206
WK+HV KIKHFLWR LAT +LR + I DP+C C EEE + HI FNC +
Sbjct: 38 WKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQS 97
Query: 207 IWKLSPV----NWEGLRDFTDSFPKWWMQVCQISRGGCV--VDRIQLTTYLLWWLWKSRN 368
+W+ + + W F D+ + + Q+S+ +DR L +++W LWKSRN
Sbjct: 98 VWRSANIIIGNQWGPPSSFEDNLNR----LIQLSKTQTTNSLDRF-LPFWIMWRLWKSRN 152
Query: 369 SWMF 380
++F
Sbjct: 153 VFLF 156
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 85.1 bits (209), Expect = 2e-14
Identities = 46/129 (35%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Frame = +3
Query: 6 DIMWSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFF 185
D W + WK+ V GKIKHFLWR CH+ LA + L +G+ +D C CG ED H+FF
Sbjct: 1299 DDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFF 1358
Query: 186 NCERAKIIWKLSPVNWEGLRDFTDSFPKWWMQVCQISRGGCVVDRIQL--------TTYL 341
C+ K +W+ +N E LR + Q + G V+ I
Sbjct: 1359 KCKPVKKVWQ--ALNLEELRSMLE----------QQTSGKNVLQSIYCRPENERTSAIVC 1406
Query: 342 LWWLWKSRN 368
LW WK RN
Sbjct: 1407 LWQWWKERN 1415
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 85.1 bits (209), Expect = 2e-14
Identities = 46/129 (35%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Frame = +3
Query: 6 DIMWSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFF 185
D W + WK+ V GKIKHFLWR CH+ LA + L +G+ +D C CG ED H+FF
Sbjct: 1244 DDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFF 1303
Query: 186 NCERAKIIWKLSPVNWEGLRDFTDSFPKWWMQVCQISRGGCVVDRIQL--------TTYL 341
C+ K +W+ +N E LR + Q + G V+ I
Sbjct: 1304 KCKPVKKVWQ--ALNLEELRSMLE----------QQTSGKNVLQSIYCRPENERTSAIVC 1351
Query: 342 LWWLWKSRN 368
LW WK RN
Sbjct: 1352 LWQWWKERN 1360
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 85.1 bits (209), Expect = 2e-14
Identities = 46/129 (35%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Frame = +3
Query: 6 DIMWSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFF 185
D W + WK+ V GKIKHFLWR CH+ LA + L +G+ +D C CG ED H+FF
Sbjct: 1240 DDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFF 1299
Query: 186 NCERAKIIWKLSPVNWEGLRDFTDSFPKWWMQVCQISRGGCVVDRIQL--------TTYL 341
C+ K +W+ +N E LR + Q + G V+ I
Sbjct: 1300 KCKPVKKVWQ--ALNLEELRSMLE----------QQTSGKNVLQSIYCRPENERTSAIVC 1347
Query: 342 LWWLWKSRN 368
LW WK RN
Sbjct: 1348 LWQWWKERN 1356
>gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indica Group]
Length = 561
Score = 84.0 bits (206), Expect = 3e-14
Identities = 46/129 (35%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Frame = +3
Query: 6 DIMWSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFF 185
D W + WK+ V GKIKHFLWR CH+ LA + L +G+ +D C CG ED H+FF
Sbjct: 239 DDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFF 298
Query: 186 NCERAKIIWKLSPVNWEGLRDFTDSFPKWWMQVCQISRGGCVVDRIQL--------TTYL 341
C+ K +W+ +N E LR + Q + G V+ I
Sbjct: 299 KCKPVKKVWQ--ALNLEELRS----------MLKQQTSGKNVLQSIYCRPENERTSAIVC 346
Query: 342 LWWLWKSRN 368
LW WK RN
Sbjct: 347 LWQWWKERN 355
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 83.6 bits (205), Expect = 4e-14
Identities = 40/149 (26%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Frame = +3
Query: 12 MWSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFFNC 191
++ + W +H KI+ FLW++ H + +D+LR +GI D C C E E + HI F C
Sbjct: 1041 LFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFEC 1100
Query: 192 ERAKIIWKLSPVNWEGLRDFTDSFPKWWMQVCQISRGGCVVDRIQ-LTTYLLWWLWKSRN 368
A+ +W ++ ++ G +F++S ++ +++ + ++ ++ ++LW+LWK+RN
Sbjct: 1101 PLARQVWAITHLSSAG-SEFSNSVYTNMSRLIDLTQQNDLPHHLRFVSPWILWFLWKNRN 1159
Query: 369 SWMFXXXXXXXXXXXXLAFEEWKEFDSAK 455
+ +F A+E + E+ SA+
Sbjct: 1160 ALLFEGKGSITTTLVDKAYEAYHEWFSAQ 1188
>gb|EMJ05203.1| hypothetical protein PRUPE_ppa025711mg, partial [Prunus persica]
Length = 534
Score = 81.3 bits (199), Expect = 2e-13
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Frame = +3
Query: 12 MWSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFFNC 191
+W W + K+ +F WR L T+D L + + P+C CGE E +EH+F C
Sbjct: 283 LWKLVWGSQMVPKLMNFWWRMVRGCLPTRDALFRRHLGTSPLCPICGEFPESVEHLFLLC 342
Query: 192 ERAKIIWKLSPVNWEGLRDFTDSFPKWWMQVCQISRGGCVVDR---IQLTTYLLWWLWKS 362
+++W P+N++ R S +W MQV +IS+ DR I Y W +WKS
Sbjct: 343 NWVQLVWFGGPLNYKINRQSITSMSEWMMQVLKISQ-SLGYDRKWLISQIVYTCWSIWKS 401
Query: 363 RNSWMFXXXXXXXXXXXXLAFEEWKEFDSAKLIPAAQAGLLNPVMPETESRWVSKGADYF 542
R S +F +A +F+ + P + + RW +
Sbjct: 402 RCSAVFDDISVCPHRTLLVAKNLINDFNLVRCPPGDAILEEDTDDGQRVVRWFPPPISVY 461
Query: 543 HIAVGAV-LSKTGRVGLGGLV 602
I + A +S T + GLG +V
Sbjct: 462 KINIDAAWVSSTLQAGLGVVV 482
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 80.1 bits (196), Expect = 5e-13
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 2/199 (1%)
Frame = +3
Query: 12 MWSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFFNC 191
+W + WK + K+K F W++ H+ LA +R +G+++D C CGE+EE EH+ + C
Sbjct: 1050 LWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGC 1109
Query: 192 ERAKIIWKLSPVNWEGLRDFTDSFPKWWMQVCQISRGGCVVDRIQLTTYLLWWLWKSRNS 371
+ + W +SP+ SF W + + + L + W +W RN
Sbjct: 1110 DESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHKD---TEWWALFWMICWNIWLGRNK 1166
Query: 372 WMFXXXXXXXXXXXXLAFEEWKEFDSAKLIPAAQAGLLNPV--MPETESRWVSKGADYFH 545
W+F A EF+ + +PV + E+ W
Sbjct: 1167 WVFEKKKLAFQEVVERAVRGVMEFEE-------ECAHTSPVETLNTHENGWSVPPVGMVK 1219
Query: 546 IAVGAVLSKTGRVGLGGLV 602
+ V A + K +G+GG+V
Sbjct: 1220 LNVDAAVFKHVGIGMGGVV 1238
>gb|EEE57938.1| hypothetical protein OsJ_08648 [Oryza sativa Japonica Group]
Length = 521
Score = 79.7 bits (195), Expect = 6e-13
Identities = 32/70 (45%), Positives = 42/70 (60%)
Frame = +3
Query: 6 DIMWSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFF 185
D W + WK+ V GKIKHFLWR CH+ LA + L +G+ +D C CG+ ED H+ F
Sbjct: 151 DDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGQYNEDAGHLLF 210
Query: 186 NCERAKIIWK 215
C+ K WK
Sbjct: 211 KCKPVKKWWK 220
>gb|EEC74135.1| hypothetical protein OsI_09205 [Oryza sativa Indica Group]
Length = 521
Score = 79.7 bits (195), Expect = 6e-13
Identities = 32/70 (45%), Positives = 42/70 (60%)
Frame = +3
Query: 6 DIMWSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFF 185
D W + WK+ V GKIKHFLWR CH+ LA + L +G+ +D C CG+ ED H+ F
Sbjct: 151 DDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGQYNEDAGHLLF 210
Query: 186 NCERAKIIWK 215
C+ K WK
Sbjct: 211 KCKPVKKWWK 220
>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
Length = 560
Score = 79.3 bits (194), Expect = 8e-13
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Frame = +3
Query: 6 DIMWSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFF 185
++ W + WKM + GK+KHF+WR H+ LA + L+ +G+ LD C C ED H+FF
Sbjct: 281 EMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDAGHLFF 340
Query: 186 NCERAKIIWKLSPVNWEGLRDFTDSFPKWWMQVCQISRGGCVVD--------RIQLTTYL 341
C++ K +W+ + N E LR ++ + G V++ I L +
Sbjct: 341 KCKKVKKVWQEN--NLEILR----------QELAEKRSGREVMETVFNRPAKEILLASIT 388
Query: 342 LWWLWKSRN 368
LW W RN
Sbjct: 389 LWQWWSERN 397
>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
Japonica Group]
Length = 1453
Score = 79.3 bits (194), Expect = 8e-13
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Frame = +3
Query: 6 DIMWSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFF 185
++ W + WKM + GK+KHF+WR H+ LA + L+ +G+ LD C C ED H+FF
Sbjct: 1174 EMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDAGHLFF 1233
Query: 186 NCERAKIIWKLSPVNWEGLRDFTDSFPKWWMQVCQISRGGCVVD--------RIQLTTYL 341
C++ K +W+ + N E LR ++ + G V++ I L +
Sbjct: 1234 KCKKVKKVWQEN--NLEILR----------QELAEKRSGREVMETVFNRPAKEILLASIT 1281
Query: 342 LWWLWKSRN 368
LW W RN
Sbjct: 1282 LWQWWSERN 1290
>gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
Length = 509
Score = 78.2 bits (191), Expect = 2e-12
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Frame = +3
Query: 12 MWSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFFNC 191
+W WK+ KIK F WR + +ATK L + IS PMC C EE +EH+F C
Sbjct: 237 VWKGLWKLKSLPKIKFFCWRILSNAIATKLNLFKRKISQSPMCPVCENNEESVEHLFLLC 296
Query: 192 ERAKIIWKLSPVNWEGLRDFTDSFPKWWMQVCQISRGGCVVDRIQLTT---YLLWWLWKS 362
+W SP+N+ +F W + Q++ ++DR +L T ++LW +WK+
Sbjct: 297 PWTAAVWFGSPLNYRVHNQSITTFDNWLNSMFQLNLTS-ILDRNRLMTIISFILWEIWKA 355
Query: 363 R 365
R
Sbjct: 356 R 356
>ref|NP_189164.1| ribonuclease H-like protein [Arabidopsis thaliana]
gi|9294184|dbj|BAB02086.1| reverse transcriptase-like
protein [Arabidopsis thaliana]
gi|332643482|gb|AEE77003.1| ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 343
Score = 77.8 bits (190), Expect = 2e-12
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Frame = +3
Query: 18 SRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFFNCER 197
++ WK+ KIKHFLW+ LAT D L+ + I P C C +E+E +H+FF+C
Sbjct: 16 AKIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFY 75
Query: 198 AKIIWKLSPVNWEGLRDFTDSFPKWWMQVCQISRGGCVVDR----IQLTTYLLWWLWKSR 365
A+ +W+ S + + LR T + M++ S C+ +R L ++LW LWKSR
Sbjct: 76 AQQVWRASGIPHQELRT-TGITMETKMELLLSS---CLANRQPQLFNLAIWILWRLWKSR 131
Query: 366 NSWMF 380
N +F
Sbjct: 132 NQLVF 136
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 77.8 bits (190), Expect = 2e-12
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Frame = +3
Query: 27 WKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFFNCERAKI 206
W++ + KIKHF+WR L+T QLR + I DP C C +E + HI F C A++
Sbjct: 1389 WRLKITPKIKHFIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQV 1448
Query: 207 IWKLSPVNWEGLRDFTDSFPKWWMQVCQISRG-GCVVDRIQLTTYLLWWLWKSRNSWMF 380
+W+ + + FTD+ + + Q + + + +++W LWKSRN ++F
Sbjct: 1449 VWRSANFSGSNRLCFTDNLEENIRLILQGKKNQNLPILNGLMPFWIMWRLWKSRNEYLF 1507
>ref|XP_002454801.1| hypothetical protein SORBIDRAFT_04g037700 [Sorghum bicolor]
gi|241934632|gb|EES07777.1| hypothetical protein
SORBIDRAFT_04g037700 [Sorghum bicolor]
Length = 322
Score = 77.0 bits (188), Expect = 4e-12
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 10/124 (8%)
Frame = +3
Query: 15 WSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFFNCE 194
W+R WK+ K+KHFLWR H+ L K L +G+ D +C C ++D H+FF C+
Sbjct: 50 WNRLWKLECPPKVKHFLWRMSHNTLPVKRMLSRRGVKTDTLCNMCNRLDKDGAHLFFKCK 109
Query: 195 RAKIIWKLSPVNWEGLRDFTDSFPKWWMQVCQISRGGC---VVDRI-------QLTTYLL 344
AK W+ +N E +R C ++ G V++ I QLT LL
Sbjct: 110 EAKTAWR--ELNLERIR-------------CALTEAGSARGVMETILKLKGKEQLTVILL 154
Query: 345 WWLW 356
W+W
Sbjct: 155 LWMW 158
>ref|XP_003562103.1| PREDICTED: uncharacterized protein LOC100844438 [Brachypodium
distachyon]
Length = 2492
Score = 76.6 bits (187), Expect = 5e-12
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Frame = +3
Query: 3 SDIMWSRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIF 182
S + S W + +GK++ FLW + L T D+L +G + +C C + +E H+
Sbjct: 1981 SQPLLSSVWSIKGEGKVRFFLWLLLQNRLWTADRLAARGWPHNALCLLCDQVQEGAAHLM 2040
Query: 183 FNCERAKIIWKLSPVNWEGLRDFTDSFPK---WWMQVCQISRGGCVVDRIQLTTYLLWWL 353
+C AK +W S V W + + P WW Q+ + I + + W L
Sbjct: 2041 IHCVFAKEVWHASSVKWPRVGAVAAASPSLRTWWRQIISGPKSASKDKEIAMAALIAWHL 2100
Query: 354 WKSRNSWMF 380
WK RNS +F
Sbjct: 2101 WKERNSRVF 2109
>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
reverse transcriptase [Arabidopsis thaliana]
gi|332641254|gb|AEE74775.1| RNase H domain-containing
protein [Arabidopsis thaliana]
Length = 484
Score = 76.3 bits (186), Expect = 7e-12
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +3
Query: 18 SRTWKMHVKGKIKHFLWRSCHHHLATKDQLRLKGISLDPMCCFCGEEEEDLEHIFFNCER 197
+R W + + K+KHFLWR+ LAT ++L +G+ +DP C C E E + H F C
Sbjct: 160 TRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPF 219
Query: 198 AKIIWKLSPVNWEGLRDFTDSFPKWWMQVCQISRGGCVVD-RIQLTTYLLWWLWKSRNSW 374
A + W+LS + + ++ F + + + + D L +L+W +WK+RN+
Sbjct: 220 ATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNV 279
Query: 375 MF 380
+F
Sbjct: 280 VF 281