BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00031751
         (440 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    61   2e-07
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    59   9e-07
dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like ...    57   3e-06
gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. ...    56   4e-06
gb|ABK28206.1| unknown [Arabidopsis thaliana]                          56   6e-06
ref|NP_180979.1| polynucleotidyl transferase, ribonuclease H-lik...    56   6e-06
ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thalia...    56   6e-06
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    55   7e-06

>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
 Frame = +3

Query: 3    EVLCEGCGEESETIEHFLFHCDRAKRIWKLAPLDWSGIYHDKMKVGEWWNAVCQIKGNFE 182
            E +C  CG E E+I H LF C  +++IW L+P+  S     +  +   ++ +      F+
Sbjct: 961  EKVCPRCGAEEESINHLLFLCPPSRQIWALSPIPSSEYIFPRNSLFYNFDFLLSRGKEFD 1020

Query: 183  -GRNRIQLSTYILWWLWKTRNAWKFQKKWFSDLEVISFALQEWN 311
               + +++  +ILW++WK+RN + F+    S   ++ FA+QE N
Sbjct: 1021 IAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVILDFAIQEAN 1064


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/104 (30%), Positives = 52/104 (50%)
 Frame = +3

Query: 12   CEGCGEESETIEHFLFHCDRAKRIWKLAPLDWSGIYHDKMKVGEWWNAVCQIKGNFEGRN 191
            C  CGE+ ET EH ++ CD + R W ++PL    I+   ++ G +   V  +    +   
Sbjct: 1092 CPRCGEKEETTEHLIWGCDESSRAWYISPL---RIHTGNIEAGSFRIWVESLLDTHKDTE 1148

Query: 192  RIQLSTYILWWLWKTRNAWKFQKKWFSDLEVISFALQEWNEFDK 323
               L   I W +W  RN W F+KK  +  EV+  A++   EF++
Sbjct: 1149 WWALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFEE 1192


>dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1197

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
 Frame = +3

Query: 9    LCEGCGEESETIEHFLFHCDRAKRIWKLAPLDWSGIY--HDKMKVGEWWNAVCQIKGNFE 182
            +C  CGE  ET  H LF+C   +R+W+LAPL+   ++     +K+G  W    +   +  
Sbjct: 910  VCCRCGE-LETSSHALFNCMFVQRVWRLAPLEGIDLFLVFTDVKLGLSWLKKKKTLPSV- 967

Query: 183  GRNRIQLSTYILWWLWKTRNAWKFQKKWFSDLEVISFALQEWNEF 317
            G     L  +I W LW TRN   F    FS+LE I+ A+Q+  E+
Sbjct: 968  GLGYCALYPWICWTLWITRNQKVFSNILFSELETINKAIQDAKEW 1012


>gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1555

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
 Frame = +3

Query: 12   CEGCGEESETIEHFLFHCDRAKRIWKLAPLDWSGIYHDKMKVGEWWNAVCQIKG-NFEGR 188
            C+ CG  +E+I H LFHC  A+R+W LAPL  +  +   + +   W A+  +K     G 
Sbjct: 1289 CKRCGS-NESITHLLFHCQFAQRVWHLAPLATAPDFRGMIDLMADWPALSNLKALPPTGI 1347

Query: 189  NRIQLSTYILWWLWKTRNAWKFQKKWFSDLEVISFAL---QEWN 311
                L  +I W +WK RN + F+    S  + +S A+   +EW+
Sbjct: 1348 ASGNLVPWIFWNIWKARNRFVFEGVSASPEDTLSSAIRLAREWS 1391


>gb|ABK28206.1| unknown [Arabidopsis thaliana]
          Length = 293

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
 Frame = +3

Query: 3   EVLCEGCGEESETIEHFLFHCDRAKRIWKLAPLDW--SGIYHDKMKVGEWWNAVCQIKGN 176
           E  C  C +  ET+ H LF C  A+ +W ++P+     G + D +    +W  V  ++  
Sbjct: 9   EASCVRCPDSRETVNHLLFKCCFARLVWAISPIPAYPEGEWTDSLYANLYW--VLNLEVE 66

Query: 177 FEGRNRI-QLSTYILWWLWKTRNAWKFQKKWFSDLEVISFALQEWNEF 317
                +I  L  ++LW LWK+RN   F+ K +   EV+  A++++ E+
Sbjct: 67  IPKLGKIGNLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEW 114


>ref|NP_180979.1| polynucleotidyl transferase, ribonuclease H-like superfamily
           protein [Arabidopsis thaliana] gi|3337363|gb|AAC27408.1|
           putative non-LTR retroelement reverse transcriptase
           [Arabidopsis thaliana] gi|91805481|gb|ABE65469.1|
           hypothetical protein At2g34320 [Arabidopsis thaliana]
           gi|330253864|gb|AEC08958.1| polynucleotidyl transferase,
           ribonuclease H-like superfamily protein [Arabidopsis
           thaliana]
          Length = 292

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
 Frame = +3

Query: 3   EVLCEGCGEESETIEHFLFHCDRAKRIWKLAPLDW--SGIYHDKMKVGEWWNAVCQIKGN 176
           E  C  C +  ET+ H LF C  A+ +W ++P+     G + D +    +W  V  ++  
Sbjct: 9   EASCVRCPDSRETVNHLLFKCCFARLVWAISPIPAYPEGEWTDSLYANLYW--VLNLEVE 66

Query: 177 FEGRNRI-QLSTYILWWLWKTRNAWKFQKKWFSDLEVISFALQEWNEF 317
                +I  L  ++LW LWK+RN   F+ K +   EV+  A++++ E+
Sbjct: 67  IPKLGKIGNLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEW 114


>ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thaliana]
           gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
           thaliana] gi|7269807|emb|CAB79667.1| putative protein
           [Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
           putative reverse transcriptase/RNA-dependent DNA
           polymerase [Arabidopsis thaliana]
           gi|332660185|gb|AEE85585.1| ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 575

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
 Frame = +3

Query: 3   EVLCEGCGEESETIEHFLFHCDRAKRIWKLA--PLDWSGIYHDKMKVGEWWNAVCQI-KG 173
           E  C  C    ET+ H LF C  A+  W ++  P+   G + D + V  +W  V  +  G
Sbjct: 292 ESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLYW--VFNLGNG 349

Query: 174 NFEGRNRIQLSTYILWWLWKTRNAWKFQKKWFSDLEVISFA---LQEW 308
           N +     QL  ++LW LWK RN   F+ + F+  EV+  A   L+EW
Sbjct: 350 NPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEW 397


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
            thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
 Frame = +3

Query: 12   CEGCGEESETIEHFLFHCDRAKRIWKLAPLDWSGIYHDKMKVGEWWNAVCQIKGNFEGRN 191
            C+ CGEE E+I H LF C  A+++W L+ +  S        +      + ++KG      
Sbjct: 1086 CQVCGEEGESINHVLFTCSLARQVWALSGVPTSQFGFQNSSIFANIQYLLELKGKGLIPE 1145

Query: 192  RIQLS-TYILWWLWKTRNAWKFQKKWFSDL---EVISFALQEW 308
            +I+ S  ++LW LWK R+   F+   FS L   E I   +QEW
Sbjct: 1146 QIKKSWPWVLWRLWKNRDKLFFEGTIFSPLKSIEKIRDDVQEW 1188