BLASTX nr result

ID: Rehmannia23_contig00030623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00030623
         (478 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus ...    60   3e-07

>ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus communis]
           gi|223525882|gb|EEF28304.1| DNA repair protein RAD50,
           putative [Ricinus communis]
          Length = 1362

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
 Frame = -3

Query: 473 DSESLRKELSERNA-------ELSTSRSECHRLTQEIEQLKRLLQDSNTQKXXXXXXXXX 315
           D E LRKELS+++        ELS SR EC  L QEIEQ+K LL++S  ++         
Sbjct: 298 DLEKLRKELSDQSKCQASLEMELSESRRECDGLKQEIEQVKILLEESLVKQKSAENMELQ 357

Query: 314 XXXLKKVQESNXXXXXXXXXXXXXXEKQKVEIESLSADKVEFINTNEQNNRNI-MVLESK 138
              +  +Q+                  Q  + +  + + V  +   E     + M + + 
Sbjct: 358 AKDMGNLQKELEDEVRFEKESNANLALQLKKTQESNIELVSILQELEDTIEKLKMEIANL 417

Query: 137 LEDKIVETEIEQDLKNQILKECVVECDHKLAASERKIKNLEAALS 3
            ++K+ E E  + LK Q L EC  +   KLA  E +I NL++ LS
Sbjct: 418 SKEKVQELEAAEVLKTQTLMECEAQWRDKLAVKEEEIINLKSKLS 462


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