BLASTX nr result

ID: Rehmannia23_contig00030503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00030503
         (502 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173415.1| hypothetical protein NitaMp073 [Nicotiana tabac...    60   3e-12
ref|NP_817268.1| ORF46f [Pinus koraiensis] gi|29469808|gb|AAO741...    57   2e-06
ref|XP_006849012.1| hypothetical protein AMTR_s00028p00129850 [A...    56   6e-06

>ref|YP_173415.1| hypothetical protein NitaMp073 [Nicotiana tabacum]
           gi|56806578|dbj|BAD83479.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 106

 Score = 60.5 bits (145), Expect(2) = 3e-12
 Identities = 35/66 (53%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
 Frame = +2

Query: 2   RSYLVFRICLDLVLLSWSAPKQCFTLRL-------NAFRGDPASFGFEWRFSLTTIHPLI 160
           RSYLVFR+CLDLV LS  APK CFT R          F  +  + G      LTT HPLI
Sbjct: 19  RSYLVFRVCLDLVPLSRPAPKPCFTPRCPVNCCASTHFGENQLALGASGISPLTTTHPLI 78

Query: 161 LQHQSI 178
           LQHQS+
Sbjct: 79  LQHQSV 84



 Score = 36.6 bits (83), Expect(2) = 3e-12
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +1

Query: 187 PLVSPKVSSWSWIDHPGLGP 246
           PL   + SSWSWIDHPG GP
Sbjct: 87  PLSFTQASSWSWIDHPGSGP 106


>ref|NP_817268.1| ORF46f [Pinus koraiensis] gi|29469808|gb|AAO74136.1| ORF46f [Pinus
           koraiensis]
          Length = 46

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 7/45 (15%)
 Frame = -1

Query: 127 PLEPKACWVSPKCIQAQ-------GKALFRCRP*EQYQIKANSEY 14
           PLEP+A W SPKC++AQ       GKALFR  P E+YQI+ANSEY
Sbjct: 2   PLEPRASWFSPKCVEAQQLTGPSRGKALFRYGPRERYQIEANSEY 46


>ref|XP_006849012.1| hypothetical protein AMTR_s00028p00129850 [Amborella trichopoda]
           gi|548852485|gb|ERN10593.1| hypothetical protein
           AMTR_s00028p00129850 [Amborella trichopoda]
          Length = 132

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/91 (45%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
 Frame = +1

Query: 7   ISSIQNLP*FGTA-----LMVCTETVLYPAPEC-------ISGRPSKLWVRVAFFPNHNS 150
           +SSIQ+L   GTA     L   TETV+YP             G P+       F PNHNS
Sbjct: 49  LSSIQSLSRSGTARSGTALAARTETVIYPKISSQPLRLNVFRGEPASTGFEWNFTPNHNS 108

Query: 151 SVDSSTSVDLNLPLVSPKVSSWSWIDHPGLG 243
           SVDSSTSV  +L LVSPK+       HPG G
Sbjct: 109 SVDSSTSVGSDLHLVSPKL-------HPGHG 132


Top