BLASTX nr result
ID: Rehmannia23_contig00030503
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia23_contig00030503 (502 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_173415.1| hypothetical protein NitaMp073 [Nicotiana tabac... 60 3e-12 ref|NP_817268.1| ORF46f [Pinus koraiensis] gi|29469808|gb|AAO741... 57 2e-06 ref|XP_006849012.1| hypothetical protein AMTR_s00028p00129850 [A... 56 6e-06 >ref|YP_173415.1| hypothetical protein NitaMp073 [Nicotiana tabacum] gi|56806578|dbj|BAD83479.1| hypothetical protein (mitochondrion) [Nicotiana tabacum] Length = 106 Score = 60.5 bits (145), Expect(2) = 3e-12 Identities = 35/66 (53%), Positives = 39/66 (59%), Gaps = 7/66 (10%) Frame = +2 Query: 2 RSYLVFRICLDLVLLSWSAPKQCFTLRL-------NAFRGDPASFGFEWRFSLTTIHPLI 160 RSYLVFR+CLDLV LS APK CFT R F + + G LTT HPLI Sbjct: 19 RSYLVFRVCLDLVPLSRPAPKPCFTPRCPVNCCASTHFGENQLALGASGISPLTTTHPLI 78 Query: 161 LQHQSI 178 LQHQS+ Sbjct: 79 LQHQSV 84 Score = 36.6 bits (83), Expect(2) = 3e-12 Identities = 14/20 (70%), Positives = 15/20 (75%) Frame = +1 Query: 187 PLVSPKVSSWSWIDHPGLGP 246 PL + SSWSWIDHPG GP Sbjct: 87 PLSFTQASSWSWIDHPGSGP 106 >ref|NP_817268.1| ORF46f [Pinus koraiensis] gi|29469808|gb|AAO74136.1| ORF46f [Pinus koraiensis] Length = 46 Score = 57.4 bits (137), Expect = 2e-06 Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 7/45 (15%) Frame = -1 Query: 127 PLEPKACWVSPKCIQAQ-------GKALFRCRP*EQYQIKANSEY 14 PLEP+A W SPKC++AQ GKALFR P E+YQI+ANSEY Sbjct: 2 PLEPRASWFSPKCVEAQQLTGPSRGKALFRYGPRERYQIEANSEY 46 >ref|XP_006849012.1| hypothetical protein AMTR_s00028p00129850 [Amborella trichopoda] gi|548852485|gb|ERN10593.1| hypothetical protein AMTR_s00028p00129850 [Amborella trichopoda] Length = 132 Score = 55.8 bits (133), Expect = 6e-06 Identities = 41/91 (45%), Positives = 47/91 (51%), Gaps = 12/91 (13%) Frame = +1 Query: 7 ISSIQNLP*FGTA-----LMVCTETVLYPAPEC-------ISGRPSKLWVRVAFFPNHNS 150 +SSIQ+L GTA L TETV+YP G P+ F PNHNS Sbjct: 49 LSSIQSLSRSGTARSGTALAARTETVIYPKISSQPLRLNVFRGEPASTGFEWNFTPNHNS 108 Query: 151 SVDSSTSVDLNLPLVSPKVSSWSWIDHPGLG 243 SVDSSTSV +L LVSPK+ HPG G Sbjct: 109 SVDSSTSVGSDLHLVSPKL-------HPGHG 132