BLASTX nr result

ID: Rehmannia23_contig00029906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00029906
         (393 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001109497.1| hypothetical protein Poptr_cp018 [Populus tr...    79   6e-13
gb|AFK34406.1| unknown [Lotus japonicus]                               74   3e-11
pir||T08999 hypothetical protein - spinach chloroplast                 70   4e-10
gb|EPS74483.1| hypothetical protein M569_00272, partial [Genlise...    68   1e-09
ref|NP_054493.1| hypothetical protein NitaCp017 [Nicotiana tabac...    55   7e-06

>ref|YP_001109497.1| hypothetical protein Poptr_cp018 [Populus trichocarpa]
           gi|133712057|gb|ABO36700.1| conserved hypothetical
           protein [Populus trichocarpa]
          Length = 113

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 40/47 (85%), Positives = 41/47 (87%)
 Frame = -3

Query: 388 TTGTLINKINEVAINAKTANWKTRVMLLILQDTNK*TIPFDPSISQK 248
           TTGTLINKI+EVAINAKTANWK  VM LILQ TNK TIPFDPSI QK
Sbjct: 58  TTGTLINKIDEVAINAKTANWKAIVMFLILQATNKRTIPFDPSIRQK 104


>gb|AFK34406.1| unknown [Lotus japonicus]
          Length = 80

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 36/43 (83%), Positives = 38/43 (88%)
 Frame = -3

Query: 391 NTTGTLINKINEVAINAKTANWKTRVMLLILQDTNK*TIPFDP 263
           NTTGTLINK+NEVAINAKTANWK  V+ LILQ TNK TIPFDP
Sbjct: 35  NTTGTLINKMNEVAINAKTANWKAIVIFLILQITNKRTIPFDP 77


>pir||T08999 hypothetical protein - spinach chloroplast
          Length = 90

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = -3

Query: 391 NTTGTLINKINEVAINAKTANWKTRVMLLILQDTNK*TIPFDPSIS 254
           NTTGTLI+KI+EVAINAKTANWK  V+ +ILQ   K TIPFDPSIS
Sbjct: 35  NTTGTLISKIDEVAINAKTANWKAIVIRIILQAIKKQTIPFDPSIS 80


>gb|EPS74483.1| hypothetical protein M569_00272, partial [Genlisea aurea]
          Length = 67

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -3

Query: 391 NTTGTLINKINEVAINAKTANWKTRVMLLILQD 293
           NTTGTLINKINEVAINAKTANWKTRVMLLILQD
Sbjct: 35  NTTGTLINKINEVAINAKTANWKTRVMLLILQD 67


>ref|NP_054493.1| hypothetical protein NitaCp017 [Nicotiana tabacum]
           gi|78102529|ref|YP_358670.1| hypothetical protein
           NisyCp023 [Nicotiana sylvestris]
           gi|11826|emb|CAA77348.1| hypothetical protein [Nicotiana
           tabacum] gi|77799556|dbj|BAE46645.1| hypothetical
           protein [Nicotiana sylvestris] gi|225286|prf||1211235X
           ORF 105
          Length = 105

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/65 (47%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
 Frame = -1

Query: 183 PFDHSIRTWSQGKWNLIFYFTNGNAGFYIRYRYLERSVDSH----LISFYR**WYPPPMA 16
           P  H IRTWS GKWN IFYFTNG+A  YI Y  ++RS         +   +      PMA
Sbjct: 41  PLSHFIRTWSGGKWNFIFYFTNGHARSYI-YIRIDRSTGGFAPEIFLQIVQIVGVSTPMA 99

Query: 15  MFYLE 1
           MFY E
Sbjct: 100 MFYSE 104



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 40/94 (42%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
 Frame = -3

Query: 277 IPFDPSISQK--IVRKYIIKGF*FTTNRXXXXXXXXXLYSYM----ESGEMEFDFLFHKW 116
           IPFDPSISQK  IV KY+I+GF F  N            S+       G+  F F F   
Sbjct: 4   IPFDPSISQKILIVIKYVIEGFYFIMNPLILYDLLLLPLSHFIRTWSGGKWNFIFYFTNG 63

Query: 115 ECWILYTIQISRAIGRFTPDIFLQIVV---VSTP 23
                  I+I R+ G F P+IFLQIV    VSTP
Sbjct: 64  HARSYIYIRIDRSTGGFAPEIFLQIVQIVGVSTP 97


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