BLASTX nr result
ID: Rehmannia23_contig00029880
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00029880
(310 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I an... 94 2e-17
ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I an... 92 5e-17
ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an... 89 5e-16
gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlise... 88 1e-15
gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma ... 87 2e-15
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ... 87 2e-15
ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citr... 85 9e-15
ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I an... 84 1e-14
ref|XP_006857745.1| hypothetical protein AMTR_s00061p00192780 [A... 77 3e-12
ref|XP_006283792.1| hypothetical protein CARUB_v10004883mg [Caps... 73 3e-11
ref|XP_004296322.1| PREDICTED: DNA-directed RNA polymerases I an... 73 4e-11
ref|XP_002300385.1| DNA-directed RNA polymerase family protein [... 72 6e-11
gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RP... 70 2e-10
ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata] ... 69 5e-10
gb|EMJ06508.1| hypothetical protein PRUPE_ppa006811mg [Prunus pe... 69 6e-10
ref|XP_004968297.1| PREDICTED: DNA-directed RNA polymerases I an... 69 8e-10
ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I an... 68 1e-09
gb|ESW18590.1| hypothetical protein PHAVU_006G053600g [Phaseolus... 67 2e-09
ref|XP_006414263.1| hypothetical protein EUTSA_v10025407mg [Eutr... 67 2e-09
ref|NP_001130839.1| uncharacterized protein LOC100191943 [Zea ma... 67 2e-09
>ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Solanum tuberosum]
Length = 393
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/75 (61%), Positives = 58/75 (77%)
Frame = -1
Query: 226 GSQNQTVGMVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTH 47
G+ ++ M SE S + +E+ TKV VWDLPD+PKGKLPPH++LQRTRVLC APT+
Sbjct: 2 GTATESESMDSE---STSTQEETFTKVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTN 58
Query: 46 TESIQYSGAYAAMGV 2
TE++ YSGAYAAMGV
Sbjct: 59 TENVNYSGAYAAMGV 73
>ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Solanum lycopersicum]
Length = 393
Score = 92.4 bits (228), Expect = 5e-17
Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
Frame = -1
Query: 208 VGMVSEKEKSET----MKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTE 41
+G +E E ++ +E+ TKV VWDLPD+PKGKLPPH++LQRTRVLC APT+TE
Sbjct: 1 MGTATENESMDSEGTSTQEETFTKVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTE 60
Query: 40 SIQYSGAYAAMGV 2
++ YSGAYAAMGV
Sbjct: 61 NVNYSGAYAAMGV 73
>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
protein product [Vitis vinifera]
Length = 372
Score = 89.4 bits (220), Expect = 5e-16
Identities = 37/48 (77%), Positives = 45/48 (93%)
Frame = -1
Query: 145 PVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGV 2
P D+PDVPKG+LPPH++LQRTRVLC FDAPTHTE++QYSGAY++MGV
Sbjct: 5 PALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGV 52
>gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlisea aurea]
Length = 364
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/47 (82%), Positives = 44/47 (93%)
Frame = -1
Query: 142 VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGV 2
+WDLPDVP G+LPPHLQLQRTRVLCT +APT+TE+IQYSGAYA MGV
Sbjct: 1 LWDLPDVPGGELPPHLQLQRTRVLCTSEAPTYTENIQYSGAYALMGV 47
>gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma cacao]
Length = 383
Score = 87.4 bits (215), Expect = 2e-15
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = -1
Query: 163 QKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGV 2
++ K +WDLPDVP G+LPPHL+LQRTRVLC DAP HTES+ YSGAYA+MGV
Sbjct: 10 EEKKKFSIWDLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYASMGV 63
>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
polymerase I/III subunits, putative [Ricinus communis]
Length = 374
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/60 (63%), Positives = 48/60 (80%)
Frame = -1
Query: 181 SETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGV 2
S+ ++K K +WDLPDVP G+LPPHLQLQRTRV+C DAP HT++I YSGAYA++GV
Sbjct: 3 SKQENKEKNKKFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGV 62
>ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citrus clementina]
gi|557555856|gb|ESR65870.1| hypothetical protein
CICLE_v10008413mg [Citrus clementina]
Length = 421
Score = 85.1 bits (209), Expect = 9e-15
Identities = 37/62 (59%), Positives = 48/62 (77%)
Frame = -1
Query: 187 EKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAM 8
E+ ET K+++ +WDLPDVP+ KLPPH++ QRTRV C DAP HTE++ YSGAYA+M
Sbjct: 42 EREETEKKKEAESFSIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASM 100
Query: 7 GV 2
GV
Sbjct: 101 GV 102
>ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Citrus sinensis]
Length = 382
Score = 84.3 bits (207), Expect = 1e-14
Identities = 37/62 (59%), Positives = 48/62 (77%)
Frame = -1
Query: 187 EKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAM 8
E+ ET K+++ +WDLPDVP+ KLPPH++ QRTRV C DAP HTE++ YSGAYA+M
Sbjct: 3 EREETEKKKEGESFSIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASM 61
Query: 7 GV 2
GV
Sbjct: 62 GV 63
>ref|XP_006857745.1| hypothetical protein AMTR_s00061p00192780 [Amborella trichopoda]
gi|548861841|gb|ERN19212.1| hypothetical protein
AMTR_s00061p00192780 [Amborella trichopoda]
Length = 304
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/50 (70%), Positives = 39/50 (78%)
Frame = -1
Query: 151 KVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGV 2
+V D+PDVPKG+LP HL QRTRVLC DA HTE IQYSGAYA+MGV
Sbjct: 3 RVSALDMPDVPKGQLPEHLNFQRTRVLCASDAALHTEGIQYSGAYASMGV 52
>ref|XP_006283792.1| hypothetical protein CARUB_v10004883mg [Capsella rubella]
gi|482552497|gb|EOA16690.1| hypothetical protein
CARUB_v10004883mg [Capsella rubella]
Length = 424
Score = 73.2 bits (178), Expect = 3e-11
Identities = 38/67 (56%), Positives = 47/67 (70%)
Frame = -1
Query: 202 MVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSG 23
+V+++EK E ++DLPDVPKG LPPHL+L+RTRV+C DAPTHT YSG
Sbjct: 9 IVTDEEKLEAKNFN------IFDLPDVPKG-LPPHLELERTRVVCKVDAPTHTTETIYSG 61
Query: 22 AYAAMGV 2
AYA MGV
Sbjct: 62 AYAFMGV 68
>ref|XP_004296322.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
rpac1-like [Fragaria vesca subsp. vesca]
Length = 382
Score = 72.8 bits (177), Expect = 4e-11
Identities = 38/74 (51%), Positives = 48/74 (64%)
Frame = -1
Query: 223 SQNQTVGMVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHT 44
S N+ SE E+S++ + T + L DVP GKLPPH+ QRTRV C DAP HT
Sbjct: 3 SGNEDTTSSSESEQSDSAND---TLDFIEKLSDVPMGKLPPHIDFQRTRVDCKADAPIHT 59
Query: 43 ESIQYSGAYAAMGV 2
++ QYSGAYA+MGV
Sbjct: 60 DTFQYSGAYASMGV 73
>ref|XP_002300385.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847643|gb|EEE85190.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 390
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/67 (52%), Positives = 49/67 (73%)
Frame = -1
Query: 202 MVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSG 23
M SE+E+ ++QK W+L DV +G+LPPH++ Q TRV C DAPT+TE++QYSG
Sbjct: 12 MSSEEEE----QQQKEEGFSYWNLKDVERGQLPPHIRKQGTRVYCKPDAPTNTETLQYSG 67
Query: 22 AYAAMGV 2
+YA+MGV
Sbjct: 68 SYASMGV 74
>gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Morus
notabilis]
Length = 411
Score = 70.5 bits (171), Expect = 2e-10
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 13/89 (14%)
Frame = -1
Query: 229 RGSQNQTVG---MVSEKE-KSETMKEQKTTKVPV-------W--DLPDVPKGKLPPHLQL 89
RG + QT+ + +E E ++ET E +++ V W L DVP GKLPPHL+
Sbjct: 4 RGVKQQTMSESTLETETETETETGTESESSSVDPKGGGGLRWLEKLSDVPMGKLPPHLEF 63
Query: 88 QRTRVLCTFDAPTHTESIQYSGAYAAMGV 2
QRT V C DAP HT++IQYSGAYA++GV
Sbjct: 64 QRTHVECKADAPLHTDTIQYSGAYASLGV 92
>ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata]
gi|297333970|gb|EFH64388.1| ATRPAC43 [Arabidopsis lyrata
subsp. lyrata]
Length = 385
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = -1
Query: 142 VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGV 2
++DLPDVP G LPPHL+LQRTR +C DAP H S+ YSGAYA+MGV
Sbjct: 23 IFDLPDVPTG-LPPHLELQRTRAVCKNDAPIHPTSVLYSGAYASMGV 68
>gb|EMJ06508.1| hypothetical protein PRUPE_ppa006811mg [Prunus persica]
Length = 394
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/74 (45%), Positives = 50/74 (67%)
Frame = -1
Query: 223 SQNQTVGMVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHT 44
S N+ SE E ++++KE T + + +L DVP G+LP +++ QRTRV C DAP HT
Sbjct: 3 SDNEDTTSSSESEGADSVKENATLEF-IENLSDVPMGRLPSNIEFQRTRVDCKADAPIHT 61
Query: 43 ESIQYSGAYAAMGV 2
++ QYSGAY++M V
Sbjct: 62 DTFQYSGAYSSMRV 75
>ref|XP_004968297.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Setaria italica]
Length = 372
Score = 68.6 bits (166), Expect = 8e-10
Identities = 32/56 (57%), Positives = 39/56 (69%)
Frame = -1
Query: 169 KEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGV 2
K+ +K V D+PD + KLP HL+LQRTRV+C DAP HT+ QYSG YAA GV
Sbjct: 3 KKGTKSKNQVGDVPDQQENKLPDHLELQRTRVVCNADAPIHTQGFQYSGTYAATGV 58
>ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Cucumis sativus]
gi|449522768|ref|XP_004168398.1| PREDICTED: DNA-directed
RNA polymerases I and III subunit RPAC1-like [Cucumis
sativus]
Length = 391
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/46 (67%), Positives = 39/46 (84%)
Frame = -1
Query: 142 VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMG 5
+ +LPDVP KLPPH++LQRTRV C DAP HT++IQYSGA+A+MG
Sbjct: 29 IMNLPDVPM-KLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMG 73
>gb|ESW18590.1| hypothetical protein PHAVU_006G053600g [Phaseolus vulgaris]
Length = 386
Score = 67.4 bits (163), Expect = 2e-09
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Frame = -1
Query: 187 EKSETMKEQKTTKVP---VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAY 17
E+ E+M EQ + + L DVP KLPPHL+L RTRVLC DAP HT++I YSGAY
Sbjct: 3 EEDESMVEQSDNGLGLDFILSLDDVPS-KLPPHLELFRTRVLCNNDAPIHTDTIHYSGAY 61
Query: 16 AAMGV 2
A+GV
Sbjct: 62 GALGV 66
>ref|XP_006414263.1| hypothetical protein EUTSA_v10025407mg [Eutrema salsugineum]
gi|557115433|gb|ESQ55716.1| hypothetical protein
EUTSA_v10025407mg [Eutrema salsugineum]
Length = 394
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = -1
Query: 136 DLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGV 2
D PDVP +LPPHL+LQRTRVLC DAP HT S+QYSGAY +GV
Sbjct: 17 DHPDVP-ARLPPHLELQRTRVLCKNDAPIHTSSVQYSGAYKFVGV 60
>ref|NP_001130839.1| uncharacterized protein LOC100191943 [Zea mays]
gi|194690246|gb|ACF79207.1| unknown [Zea mays]
gi|413926820|gb|AFW66752.1| hypothetical protein
ZEAMMB73_992882 [Zea mays]
Length = 372
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = -1
Query: 169 KEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGV 2
K K+ K V D+P+ + KLP +L+LQRTRV+C DAP HT+ QYSGA+AAMG+
Sbjct: 4 KGTKSKKEKVDDVPNEQENKLPDYLELQRTRVVCNADAPIHTQGFQYSGAFAAMGI 59