BLASTX nr result
ID: Rehmannia23_contig00029831
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00029831
(336 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi... 92 9e-17
ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
gb|EOY32970.1| Pentatricopeptide repeat-containing protein, puta... 88 1e-15
gb|ESW30051.1| hypothetical protein PHAVU_002G120500g [Phaseolus... 86 7e-15
gb|AFK33630.1| unknown [Lotus japonicus] 84 3e-14
ref|XP_003612457.1| Pentatricopeptide repeat-containing protein ... 79 6e-13
emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera] 79 6e-13
ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_004246209.1| PREDICTED: pentatricopeptide repeat-containi... 70 4e-10
gb|EXB70628.1| hypothetical protein L484_023813 [Morus notabilis] 69 5e-10
ref|XP_006437483.1| hypothetical protein CICLE_v10033975mg [Citr... 68 1e-09
ref|NP_174459.1| pentatricopeptide repeat-containing protein [Ar... 66 4e-09
ref|XP_002519945.1| pentatricopeptide repeat-containing protein,... 65 7e-09
ref|XP_006303657.1| hypothetical protein CARUB_v10011695mg [Caps... 65 1e-08
ref|XP_006415303.1| hypothetical protein EUTSA_v10009456mg [Eutr... 62 8e-08
ref|XP_002893686.1| pentatricopeptide repeat-containing protein ... 62 1e-07
>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31790-like [Glycine max]
Length = 423
Score = 91.7 bits (226), Expect = 9e-17
Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 8/107 (7%)
Frame = +2
Query: 38 NPPIQIQLPLHRP-----EYKTSKPIRIKS---RPKKSNTKPVTTTSDVLHLMDSLKLPI 193
N ++ +LPL P + + +P+ + + KK + TTSD+LHLM++L P+
Sbjct: 36 NHQLEFRLPLRHPIHNFPNHTSPQPLTQTTTFTKKKKKKKRKGATTSDILHLMEALPFPV 95
Query: 194 PIDIYTSLIKECTELGDPLKAIELHEHVRRSGFRLSLPLRNRILLMY 334
PIDIYTSLIKECT GDP AIEL H+ +SG + LP NRIL+M+
Sbjct: 96 PIDIYTSLIKECTVSGDPETAIELATHISKSGIKPPLPFLNRILVMF 142
>ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31790-like [Cicer arietinum]
Length = 418
Score = 90.9 bits (224), Expect = 2e-16
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 13/114 (11%)
Frame = +2
Query: 32 TANPPIQIQLPLHRPE------YKTSKPIRIKSRPKKSNTK-------PVTTTSDVLHLM 172
++N + ++LP P+ + +S+P+ + K+NTK TTS +L LM
Sbjct: 22 SSNHQLHLRLPFRNPKLINFPHHPSSQPLTVTPPRNKNNTKNKNNNKRKSATTSHILPLM 81
Query: 173 DSLKLPIPIDIYTSLIKECTELGDPLKAIELHEHVRRSGFRLSLPLRNRILLMY 334
D+L PIPIDIYTSL+KECT GDP A ELH H+ RSG L L NRIL+M+
Sbjct: 82 DALHFPIPIDIYTSLVKECTLSGDPETATELHSHITRSGIGPPLTLLNRILIMF 135
>gb|EOY32970.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 413
Score = 87.8 bits (216), Expect = 1e-15
Identities = 52/108 (48%), Positives = 64/108 (59%), Gaps = 7/108 (6%)
Frame = +2
Query: 32 TANPPI-----QIQLPLHRPEYKTSKPIR--IKSRPKKSNTKPVTTTSDVLHLMDSLKLP 190
T PPI Q+ L + + KT P S+P SN TTSD+L LMDSL LP
Sbjct: 31 TPAPPISQLHSQLPLRITKQSSKTPPPPTPISTSKPISSNPCSSHTTSDILRLMDSLSLP 90
Query: 191 IPIDIYTSLIKECTELGDPLKAIELHEHVRRSGFRLSLPLRNRILLMY 334
IP DIY SL+KECT +A+ELH H+R S + SLPL NR+LLM+
Sbjct: 91 IPPDIYASLVKECTVTRHSRRALELHSHIRNSRIKPSLPLLNRLLLMH 138
>gb|ESW30051.1| hypothetical protein PHAVU_002G120500g [Phaseolus vulgaris]
Length = 420
Score = 85.5 bits (210), Expect = 7e-15
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 8/108 (7%)
Frame = +2
Query: 35 ANPPIQIQL--PLHRPEYKTSKPIR------IKSRPKKSNTKPVTTTSDVLHLMDSLKLP 190
++P Q++L PL P + +P+ K KK K TT D+LHLMD+L P
Sbjct: 33 SSPSHQLELLPPLRYPIHTFPRPLIPQTTTFTKKEIKKKKRKEATTL-DILHLMDALPFP 91
Query: 191 IPIDIYTSLIKECTELGDPLKAIELHEHVRRSGFRLSLPLRNRILLMY 334
I IDIYTSLIKECT GDP AIEL+ H+ +S + LP NRIL+M+
Sbjct: 92 ITIDIYTSLIKECTVSGDPETAIELYTHISKSDIKPPLPFLNRILIMF 139
>gb|AFK33630.1| unknown [Lotus japonicus]
Length = 356
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/74 (56%), Positives = 49/74 (66%)
Frame = +2
Query: 113 RPKKSNTKPVTTTSDVLHLMDSLKLPIPIDIYTSLIKECTELGDPLKAIELHEHVRRSGF 292
+ KK + TTS +LHLMD L PIPIDIYTSLIKECT DP AIELH H+ SG
Sbjct: 2 KKKKKRKRKGATTSHILHLMDVLPFPIPIDIYTSLIKECTLSPDPQTAIELHTHIAHSGI 61
Query: 293 RLSLPLRNRILLMY 334
+ L NRIL+M+
Sbjct: 62 KPPLSFINRILVMF 75
>ref|XP_003612457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513792|gb|AES95415.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 418
Score = 79.0 bits (193), Expect = 6e-13
Identities = 48/103 (46%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Frame = +2
Query: 44 PIQIQLPLHR-PEYKTSKPIRIKSRP-----KKSNTKPVTTTSDVLHLMDSLKLPIPIDI 205
P ++LPL R P+ K I S+P K + TTS +L LMD+L PI IDI
Sbjct: 33 PHLLRLPLRRNPKPKNLSLIHPSSQPITPPKKSKRRRKCDTTSHILPLMDALHFPITIDI 92
Query: 206 YTSLIKECTELGDPLKAIELHEHVRRSGFRLSLPLRNRILLMY 334
YTSL+KECT DP AIELH + G L L L NRIL+M+
Sbjct: 93 YTSLVKECTLSTDPETAIELHTQIITRGIELPLTLLNRILIMF 135
>emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]
Length = 543
Score = 79.0 bits (193), Expect = 6e-13
Identities = 46/87 (52%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +2
Query: 83 KTSKPIRIKSRPKKSNTKPVTTTS---DVLHLMDSLKLPIPIDIYTSLIKECTELGDPLK 253
K K K KKSN+ TTS D+L LMD L LPIP DIY SLIKE + GD +
Sbjct: 199 KKKKKKEKKKEKKKSNSNATPTTSTPTDILRLMDGLGLPIPPDIYASLIKESSTTGDATQ 258
Query: 254 AIELHEHVRRSGFRLSLPLRNRILLMY 334
A +L H+ RSG LS L NRILLMY
Sbjct: 259 ATQLLAHINRSGLPLSSALLNRILLMY 285
>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31790-like [Vitis vinifera]
Length = 414
Score = 77.8 bits (190), Expect = 1e-12
Identities = 46/87 (52%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +2
Query: 77 EYKTSKPIRIKSRPKKSNTKPVTTT-SDVLHLMDSLKLPIPIDIYTSLIKECTELGDPLK 253
+YK S + KS SN P T+T +D+L LMD L LPIP DIY SLIKE + GD +
Sbjct: 39 KYKISNKEKKKSN---SNATPTTSTPTDILRLMDGLGLPIPPDIYASLIKESSTTGDATQ 95
Query: 254 AIELHEHVRRSGFRLSLPLRNRILLMY 334
A +L H+ RSG LS L NRILLMY
Sbjct: 96 ATQLLAHINRSGLPLSSALLNRILLMY 122
>ref|XP_004246209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31790-like [Solanum lycopersicum]
Length = 465
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +2
Query: 170 MDSLKLPIPIDIYTSLIKECTELGDPLKAIELHEHVRRSGFRLSLPLRNRILLM 331
MDSL IP+D+Y SLIKECTE DPL A+E++EHV +S SLPL NR+LLM
Sbjct: 1 MDSLGFNIPVDVYVSLIKECTESRDPLNAVEVYEHVCKSDVIPSLPLLNRLLLM 54
>gb|EXB70628.1| hypothetical protein L484_023813 [Morus notabilis]
Length = 453
Score = 69.3 bits (168), Expect = 5e-10
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Frame = +2
Query: 68 HRPEYKTSKPIRIKSRPKKSNT---KPVTTTSDVLHLMDSLKLPIPIDIYTSLIKECTEL 238
H E S I ++ + +K N P +TSDVL LMD+L LPI D+Y S +KECT
Sbjct: 76 HTVEANCSSQILVEKKMRKKNALIAPPACSTSDVLRLMDALCLPISPDMYISFMKECTIS 135
Query: 239 GDPLKAIELHEHVRRSGFR-LSLPLRNRILLM 331
D A +LH H+ R+ + L+LPL NR+L M
Sbjct: 136 ADFCGAEDLHNHISRNSLQHLALPLLNRLLFM 167
>ref|XP_006437483.1| hypothetical protein CICLE_v10033975mg [Citrus clementina]
gi|557539679|gb|ESR50723.1| hypothetical protein
CICLE_v10033975mg [Citrus clementina]
Length = 425
Score = 67.8 bits (164), Expect = 1e-09
Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Frame = +2
Query: 56 QLPLHRPEYKTSKPIRIKSRPKKSNTK-PVTTTS-DVLHLMDSLKLPIPIDIYTSLIKEC 229
QLPL P K +KP++ S +++ P T+S ++LHLMD+L LPI D+YT LIKEC
Sbjct: 38 QLPLRSP--KPTKPLKTSSNWRETTQSIPANTSSANILHLMDNLCLPITTDMYTCLIKEC 95
Query: 230 TELGDPLKAIELHEHVR-RSGFRLSLPLRNRILLMY 334
T D A EL H+R R + +L NR+LLM+
Sbjct: 96 TFQKDSAGAFELLNHIRKRVNIKPTLLFLNRLLLMH 131
>ref|NP_174459.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169166|sp|Q9C6R9.1|PPR66_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g31790 gi|12321298|gb|AAG50719.1|AC079041_12
hypothetical protein [Arabidopsis thaliana]
gi|111074348|gb|ABH04547.1| At1g31790 [Arabidopsis
thaliana] gi|332193272|gb|AEE31393.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 66.2 bits (160), Expect = 4e-09
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +2
Query: 53 IQLPLHRPEYKTSKPIRIKSRPKKSNTKPVT--TTSDVLHLMDSLKLPIPIDIYTSLIKE 226
+QL L +P+++ S+P+ + +P+ P + +TSD+L LMDSL LP DIY+ L KE
Sbjct: 38 VQLFLRKPKHQKSEPVVVIQQPQIQPQNPSSRCSTSDILRLMDSLSLPGNEDIYSCLAKE 97
Query: 227 CTELGDPLKAIELHEHVRRSGFRLSLPLRNRILLMY 334
D A EL H+ +S R ++ NR+LLM+
Sbjct: 98 SARENDQRGAHELQVHIMKSSIRPTITFINRLLLMH 133
>ref|XP_002519945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540991|gb|EEF42549.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 403
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +2
Query: 134 KPVTTTSDVLHLMDSLKLPIPIDIYTSLIKECTELGDPLKAIELHEH-VRRSGFRLSLPL 310
K ++SD++ LMDSL PIP DIYTSLIKECT D +A+ LH H + ++ +L+ PL
Sbjct: 52 KKSCSSSDIMRLMDSLCHPIPPDIYTSLIKECTLTSDSTEALCLHSHLISQTNLKLTPPL 111
Query: 311 RNRILLMY 334
+R+LLM+
Sbjct: 112 VHRLLLMH 119
>ref|XP_006303657.1| hypothetical protein CARUB_v10011695mg [Capsella rubella]
gi|482572368|gb|EOA36555.1| hypothetical protein
CARUB_v10011695mg [Capsella rubella]
Length = 411
Score = 64.7 bits (156), Expect = 1e-08
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Frame = +2
Query: 53 IQLPLHRPEYKTSKPIRIKSRPKKSNTK---PVTTTSDVLHLMDSLKLPIPIDIYTSLIK 223
+QL L +P+++ S+P+ + +P+ T+ P + SD+L LMD+L LP D+Y+ L K
Sbjct: 38 VQLLLRKPKHQKSEPVVVIQQPQIQTTQKSSPRCSISDILRLMDTLSLPGNEDLYSCLAK 97
Query: 224 ECTELGDPLKAIELHEHVRRSGFRLSLPLRNRILLMY 334
E D A EL H+ +S R S NR+LLM+
Sbjct: 98 ESARENDRRGAYELQVHIMKSSIRPSTTFVNRLLLMH 134
>ref|XP_006415303.1| hypothetical protein EUTSA_v10009456mg [Eutrema salsugineum]
gi|557093074|gb|ESQ33656.1| hypothetical protein
EUTSA_v10009456mg [Eutrema salsugineum]
Length = 400
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Frame = +2
Query: 53 IQLPLHRPEYKTSKPIRIKS------RPKKSNTKPVTTTSDVLHLMDSLKLPIPIDIYTS 214
+QL L RP+++ S+P+ + R KSN P +TSD+L LMDSL LP D+Y+
Sbjct: 37 VQLFLRRPKHQISEPVVVIQPQIQIDRAPKSN--PRCSTSDILRLMDSLSLPGNEDLYSC 94
Query: 215 LIKECTELGDPLKAIELHEHVRRSGFRLSLPLRNRILLMY 334
L KE T D A +L H+ S R NR+LLM+
Sbjct: 95 LAKESTTECDQRGAYDLQVHIMNSSVRPRTTFLNRLLLMH 134
>ref|XP_002893686.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297339528|gb|EFH69945.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 410
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Frame = +2
Query: 53 IQLPLHRPEYKTSKPIRIKSRPKKSNTKPVT--TTSDVLHLMDSLKLPIPIDIYTSLIKE 226
+QL L +P+++ S+P+ + +P+ KP +TSD+L LMDSL LP D+Y+ L KE
Sbjct: 38 VQLFLRKPKHQKSEPVVVIQQPQIQPQKPSPRCSTSDILRLMDSLSLPGNEDLYSCLAKE 97
Query: 227 CTELGDPLKAIELHEHVRRSGFRL-SLPLRNRILLMY 334
D A EL H+ +S R + NR+LLM+
Sbjct: 98 SARENDRRGAYELQVHIMKSSIRRPTTTFVNRLLLMH 134