BLASTX nr result
ID: Rehmannia23_contig00029616
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00029616
(398 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise... 162 6e-38
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma... 161 9e-38
gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, pu... 150 2e-34
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 149 5e-34
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera] 149 5e-34
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub... 148 8e-34
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 145 4e-33
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 145 4e-33
gb|ESW30448.1| hypothetical protein PHAVU_002G153700g [Phaseolus... 145 4e-33
gb|ESW30447.1| hypothetical protein PHAVU_002G153700g [Phaseolus... 145 4e-33
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub... 145 5e-33
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub... 145 5e-33
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su... 143 2e-32
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su... 143 2e-32
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su... 143 2e-32
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su... 143 2e-32
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub... 143 2e-32
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope... 143 2e-32
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su... 143 3e-32
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr... 139 3e-31
>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
Length = 1380
Score = 162 bits (409), Expect = 6e-38
Identities = 80/128 (62%), Positives = 93/128 (72%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHG+VPQS+NSRVE+ EL SL KQLVNGQ+GR+ L N
Sbjct: 412 RGDFDGDCLHGFVPQSLNSRVEIGELASLKKQLVNGQNGRSLMSLGQDSLTAAYLILNNS 471
Query: 216 VLLNKTEIQQLQMFCPCIPVLPAIIKPTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIR 37
V LNK E QQLQMFC C+P+LPAI+ +S + WTGKQLF+LLLP D F Y S+ VCIR
Sbjct: 472 VTLNKAEFQQLQMFCSCVPILPAIVNMSSNGTWWTGKQLFTLLLPVDSGFDYVSSDVCIR 531
Query: 36 KGELVSSS 13
KGEL+SSS
Sbjct: 532 KGELISSS 539
>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
Length = 1112
Score = 161 bits (407), Expect = 9e-38
Identities = 86/133 (64%), Positives = 99/133 (74%), Gaps = 1/133 (0%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGYVPQSVN+RVEL ELV+L+KQLVNGQ G+N ++G
Sbjct: 125 RGDFDGDCLHGYVPQSVNTRVELKELVTLNKQLVNGQSGQNLLSLSQDSLTAAHLISQDG 184
Query: 216 VLLNKTEIQQLQMFCPCIPVLPAIIKPTSR-SSLWTGKQLFSLLLPPDFEFAYESNGVCI 40
V LNK E+QQLQMF IP+LPAII+ TSR +S WTGKQLFS LLP DFEF+ SNGV I
Sbjct: 185 VFLNKPEMQQLQMFSAWIPMLPAIIQSTSRETSFWTGKQLFSQLLPLDFEFSNASNGVGI 244
Query: 39 RKGELVSSSYGSA 1
+ GELVS S GS+
Sbjct: 245 KHGELVSFSDGSS 257
>gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao]
Length = 1484
Score = 150 bits (379), Expect = 2e-34
Identities = 76/132 (57%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGYVPQS+ +RVEL ELVSL++QL+NGQ GRN E+G
Sbjct: 461 RGDFDGDCLHGYVPQSIKARVELIELVSLNRQLINGQSGRNLLSLSHDSLTAAYLVKEDG 520
Query: 216 VLLNKTEIQQLQMFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCI 40
VLLN ++QQL+MFCP PAI+K P RSS+WTGKQL S+L P +F++ + N V I
Sbjct: 521 VLLNLFQMQQLEMFCPNHSPFPAIVKAPLLRSSVWTGKQLLSMLFPLEFDYDFTPNDVVI 580
Query: 39 RKGELVSSSYGS 4
R GEL+SSS GS
Sbjct: 581 RNGELISSSEGS 592
>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
subunit 1-like [Vitis vinifera]
Length = 1560
Score = 149 bits (375), Expect = 5e-34
Identities = 77/133 (57%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGY+PQSV+SRVEL+ELV+L++QL+N Q GRN +E+G
Sbjct: 480 RGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDG 539
Query: 216 VLLNKTEIQQLQMFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCI 40
VLLN ++QQL+MFCP PAIIK P + +WTGKQLFS+LLPP F + + NGV I
Sbjct: 540 VLLNLFQMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPLNGVRI 599
Query: 39 RKGELVSSSYGSA 1
GEL+SSS GSA
Sbjct: 600 SDGELISSSDGSA 612
>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
Length = 1393
Score = 149 bits (375), Expect = 5e-34
Identities = 77/133 (57%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGY+PQSV+SRVEL+ELV+L++QL+N Q GRN +E+G
Sbjct: 450 RGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDG 509
Query: 216 VLLNKTEIQQLQMFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCI 40
VLLN ++QQL+MFCP PAIIK P + +WTGKQLFS+LLPP F + + NGV I
Sbjct: 510 VLLNLFQMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPLNGVRI 569
Query: 39 RKGELVSSSYGSA 1
GEL+SSS GSA
Sbjct: 570 SDGELISSSDGSA 582
>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1438
Score = 148 bits (373), Expect = 8e-34
Identities = 75/133 (56%), Positives = 92/133 (69%), Gaps = 1/133 (0%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
+GDFDGDCLHGYVPQSV +RVELTELV+LDKQLVNGQ G N E+G
Sbjct: 438 QGDFDGDCLHGYVPQSVETRVELTELVALDKQLVNGQSGTNLMSLSQDSLTAFYLITEDG 497
Query: 216 VLLNKTEIQQLQMFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCI 40
L+NK ++QQL M CP LPA+IK P+ S WT KQ+ S+ LP DF++A+ SNGV I
Sbjct: 498 TLMNKFQMQQLNMLCPHELPLPAVIKHPSGNSVSWTAKQIVSMFLPADFDYAFPSNGVYI 557
Query: 39 RKGELVSSSYGSA 1
GEL++SS GS+
Sbjct: 558 SNGELIASSEGSS 570
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 145 bits (367), Expect = 4e-33
Identities = 73/133 (54%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGY+PQS++SR+EL+ELV+L +QL++GQ+G+N LE G
Sbjct: 220 RGDFDGDCLHGYIPQSIDSRIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPG 279
Query: 216 VLLNKTEIQQLQMFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCI 40
V L++ ++QQLQMFCP + AI+K P WTGKQLFSLLLP D E+ + SNGVCI
Sbjct: 280 VFLDRFQMQQLQMFCPRQLGMTAIVKAPPGNLCYWTGKQLFSLLLPSDLEYVFPSNGVCI 339
Query: 39 RKGELVSSSYGSA 1
+GE+V+SS GS+
Sbjct: 340 SEGEIVTSSGGSS 352
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 145 bits (367), Expect = 4e-33
Identities = 73/133 (54%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGY+PQS++SR+EL+ELV+L +QL++GQ+G+N LE G
Sbjct: 433 RGDFDGDCLHGYIPQSIDSRIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPG 492
Query: 216 VLLNKTEIQQLQMFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCI 40
V L++ ++QQLQMFCP + AI+K P WTGKQLFSLLLP D E+ + SNGVCI
Sbjct: 493 VFLDRFQMQQLQMFCPRQLGMTAIVKAPPGNLCYWTGKQLFSLLLPSDLEYVFPSNGVCI 552
Query: 39 RKGELVSSSYGSA 1
+GE+V+SS GS+
Sbjct: 553 SEGEIVTSSGGSS 565
>gb|ESW30448.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1464
Score = 145 bits (367), Expect = 4e-33
Identities = 74/128 (57%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGY+PQSV++RVEL+ELV+LDKQL NGQ GRN +E+G
Sbjct: 441 RGDFDGDCLHGYIPQSVSARVELSELVALDKQLFNGQSGRNLLSLSEDSLTAAYLLMEDG 500
Query: 216 VLLNKTEIQQLQMFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCI 40
VLL+ ++QQLQM C PAI+K P+S SS W+GKQLFS+LLP DF++++ S+GV +
Sbjct: 501 VLLDVYQMQQLQMLCNKGLAPPAIVKSPSSNSSFWSGKQLFSMLLPSDFDYSFPSDGVVV 560
Query: 39 RKGELVSS 16
GELVSS
Sbjct: 561 SDGELVSS 568
>gb|ESW30447.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1463
Score = 145 bits (367), Expect = 4e-33
Identities = 74/128 (57%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGY+PQSV++RVEL+ELV+LDKQL NGQ GRN +E+G
Sbjct: 441 RGDFDGDCLHGYIPQSVSARVELSELVALDKQLFNGQSGRNLLSLSEDSLTAAYLLMEDG 500
Query: 216 VLLNKTEIQQLQMFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCI 40
VLL+ ++QQLQM C PAI+K P+S SS W+GKQLFS+LLP DF++++ S+GV +
Sbjct: 501 VLLDVYQMQQLQMLCNKGLAPPAIVKSPSSNSSFWSGKQLFSMLLPSDFDYSFPSDGVVV 560
Query: 39 RKGELVSS 16
GELVSS
Sbjct: 561 SDGELVSS 568
>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
[Cicer arietinum]
Length = 1474
Score = 145 bits (366), Expect = 5e-33
Identities = 74/132 (56%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGY+PQSV +RVEL ELV+LDKQL+NGQ GRN LE+G
Sbjct: 454 RGDFDGDCLHGYIPQSVGARVELNELVALDKQLINGQSGRNLLSLSQDSLTAAYLLLEDG 513
Query: 216 VLLNKTEIQQLQMFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCI 40
VLLN ++QQLQM C + PAI+K P+S +S W+GKQLFS+L+P F++A+ S+GV +
Sbjct: 514 VLLNVYQMQQLQMHCSRKLIPPAIVKAPSSNTSCWSGKQLFSMLMPSSFDYAFPSDGVFV 573
Query: 39 RKGELVSSSYGS 4
GEL+S S S
Sbjct: 574 CDGELISCSEAS 585
>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
[Cicer arietinum] gi|502160026|ref|XP_004511608.1|
PREDICTED: DNA-directed RNA polymerase D subunit 1-like
isoform X2 [Cicer arietinum]
gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
RNA polymerase D subunit 1-like isoform X3 [Cicer
arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
DNA-directed RNA polymerase D subunit 1-like isoform X4
[Cicer arietinum]
Length = 1475
Score = 145 bits (366), Expect = 5e-33
Identities = 74/132 (56%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGY+PQSV +RVEL ELV+LDKQL+NGQ GRN LE+G
Sbjct: 454 RGDFDGDCLHGYIPQSVGARVELNELVALDKQLINGQSGRNLLSLSQDSLTAAYLLLEDG 513
Query: 216 VLLNKTEIQQLQMFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCI 40
VLLN ++QQLQM C + PAI+K P+S +S W+GKQLFS+L+P F++A+ S+GV +
Sbjct: 514 VLLNVYQMQQLQMHCSRKLIPPAIVKAPSSNTSCWSGKQLFSMLMPSSFDYAFPSDGVFV 573
Query: 39 RKGELVSSSYGS 4
GEL+S S S
Sbjct: 574 CDGELISCSEAS 585
>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
[Glycine max]
Length = 1381
Score = 143 bits (361), Expect = 2e-32
Identities = 76/136 (55%), Positives = 96/136 (70%), Gaps = 5/136 (3%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGY+PQSV +R+EL ELV+LD+QL+NGQ GRN +E+G
Sbjct: 366 RGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDG 425
Query: 216 VLLNKTEIQQLQMFC----PCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESN 52
VLLN ++QQLQM IP PA++K P+S SSLW GKQLFS+LLP DF++++ S+
Sbjct: 426 VLLNVYQMQQLQMLSISNKRLIP--PAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSD 483
Query: 51 GVCIRKGELVSSSYGS 4
GV + GELVSSS S
Sbjct: 484 GVVVSDGELVSSSEAS 499
>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
[Glycine max]
Length = 1455
Score = 143 bits (361), Expect = 2e-32
Identities = 76/136 (55%), Positives = 96/136 (70%), Gaps = 5/136 (3%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGY+PQSV +R+EL ELV+LD+QL+NGQ GRN +E+G
Sbjct: 443 RGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDG 502
Query: 216 VLLNKTEIQQLQMFC----PCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESN 52
VLLN ++QQLQM IP PA++K P+S SSLW GKQLFS+LLP DF++++ S+
Sbjct: 503 VLLNVYQMQQLQMLSISNKRLIP--PAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSD 560
Query: 51 GVCIRKGELVSSSYGS 4
GV + GELVSSS S
Sbjct: 561 GVVVSDGELVSSSEAS 576
>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Glycine max]
Length = 1457
Score = 143 bits (361), Expect = 2e-32
Identities = 76/136 (55%), Positives = 96/136 (70%), Gaps = 5/136 (3%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGY+PQSV +R+EL ELV+LD+QL+NGQ GRN +E+G
Sbjct: 443 RGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDG 502
Query: 216 VLLNKTEIQQLQMFC----PCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESN 52
VLLN ++QQLQM IP PA++K P+S SSLW GKQLFS+LLP DF++++ S+
Sbjct: 503 VLLNVYQMQQLQMLSISNKRLIP--PAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSD 560
Query: 51 GVCIRKGELVSSSYGS 4
GV + GELVSSS S
Sbjct: 561 GVVVSDGELVSSSEAS 576
>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Glycine max]
Length = 1458
Score = 143 bits (361), Expect = 2e-32
Identities = 76/136 (55%), Positives = 96/136 (70%), Gaps = 5/136 (3%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGY+PQSV +R+EL ELV+LD+QL+NGQ GRN +E+G
Sbjct: 443 RGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDG 502
Query: 216 VLLNKTEIQQLQMFC----PCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESN 52
VLLN ++QQLQM IP PA++K P+S SSLW GKQLFS+LLP DF++++ S+
Sbjct: 503 VLLNVYQMQQLQMLSISNKRLIP--PAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSD 560
Query: 51 GVCIRKGELVSSSYGS 4
GV + GELVSSS S
Sbjct: 561 GVVVSDGELVSSSEAS 576
>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
lycopersicum]
Length = 1446
Score = 143 bits (361), Expect = 2e-32
Identities = 72/133 (54%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGY+PQS++S +EL+ELV+L +QL++GQ+G+N LE G
Sbjct: 433 RGDFDGDCLHGYIPQSIDSTIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPG 492
Query: 216 VLLNKTEIQQLQMFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCI 40
V L++ ++QQLQMFCP + AI+K P WTGKQLFSLLLP D E+ + SNGVCI
Sbjct: 493 VFLDRFQMQQLQMFCPRQLGMTAIVKAPPGNICYWTGKQLFSLLLPSDLEYVFPSNGVCI 552
Query: 39 RKGELVSSSYGSA 1
+GE+V+SS GS+
Sbjct: 553 SEGEIVTSSGGSS 565
>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
Length = 1138
Score = 143 bits (361), Expect = 2e-32
Identities = 72/133 (54%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGY+PQS++S +EL+ELV+L +QL++GQ+G+N LE G
Sbjct: 125 RGDFDGDCLHGYIPQSIDSTIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPG 184
Query: 216 VLLNKTEIQQLQMFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCI 40
V L++ ++QQLQMFCP + AI+K P WTGKQLFSLLLP D E+ + SNGVCI
Sbjct: 185 VFLDRFQMQQLQMFCPRQLGMTAIVKAPPGNICYWTGKQLFSLLLPSDLEYVFPSNGVCI 244
Query: 39 RKGELVSSSYGSA 1
+GE+V+SS GS+
Sbjct: 245 SEGEIVTSSGGSS 257
>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
max]
Length = 1369
Score = 143 bits (360), Expect = 3e-32
Identities = 75/136 (55%), Positives = 97/136 (71%), Gaps = 5/136 (3%)
Frame = -3
Query: 396 RGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENG 217
RGDFDGDCLHGY+PQSV +R+EL ELV+LD+QL+NGQ GRN +E+G
Sbjct: 357 RGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDG 416
Query: 216 VLLNKTEIQQLQMFC----PCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESN 52
VLLN ++QQLQM IP PA++K P+S SSLW+GKQ+FS+LLP DF++++ S+
Sbjct: 417 VLLNVYQMQQLQMLSISDKRLIP--PAVVKAPSSNSSLWSGKQIFSMLLPYDFDYSFPSD 474
Query: 51 GVCIRKGELVSSSYGS 4
GV + GELVSSS S
Sbjct: 475 GVVVSDGELVSSSEAS 490
>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
gi|557542783|gb|ESR53761.1| hypothetical protein
CICLE_v10018489mg [Citrus clementina]
Length = 1443
Score = 139 bits (351), Expect = 3e-31
Identities = 70/130 (53%), Positives = 91/130 (70%)
Frame = -3
Query: 393 GDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXLENGV 214
GDFDGDCLHGY+PQ++ +RVELTELV+LDKQL+N Q GRN +E+GV
Sbjct: 451 GDFDGDCLHGYIPQAIGARVELTELVALDKQLINQQSGRNLLSLGQDSLTAAHLLMEDGV 510
Query: 213 LLNKTEIQQLQMFCPCIPVLPAIIKPTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRK 34
LL+ ++QQLQMFCP + P I K S+ S+W+GKQLFS+LLPPDFE+ + S V I
Sbjct: 511 LLSHLQMQQLQMFCPHRFLSPDIFK-ISKDSVWSGKQLFSMLLPPDFEYTFPSKDVYISG 569
Query: 33 GELVSSSYGS 4
G+L+S+ S
Sbjct: 570 GKLISAEGSS 579