BLASTX nr result

ID: Rehmannia23_contig00029534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00029534
         (630 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004247144.1| PREDICTED: LOW QUALITY PROTEIN: isoamylase 2...    67   4e-09
ref|XP_006355876.1| PREDICTED: isoamylase 2, chloroplastic [Sola...    64   4e-08
ref|NP_001274804.1| isoamylase isoform 2 [Solanum tuberosum] gi|...    64   4e-08
emb|CBI32348.3| unnamed protein product [Vitis vinifera]               57   6e-06
ref|XP_002271798.1| PREDICTED: isoamylase 2, chloroplastic [Viti...    57   6e-06

>ref|XP_004247144.1| PREDICTED: LOW QUALITY PROTEIN: isoamylase 2, chloroplastic-like
           [Solanum lycopersicum]
          Length = 878

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 48/129 (37%), Positives = 67/129 (51%)
 Frame = +1

Query: 241 MAMLPVPYVMQSHCLSIEALESSKLFAASCGENGRRVTSDSNKLNLKQKTVHGKLMKPAR 420
           M   P+   + S  LS  + ES+KL  AS G  G+ V S   KL L+     G      +
Sbjct: 1   METSPIQLAVHSRLLSYGSTESTKLVPASSGNRGKIVCS-LRKLELEDMNFSGISRNNDQ 59

Query: 421 RISYDHHVLKALATSDVSVVKMSENVATYRFMMEIGGQLKVFIKKKSNNKYGLHVEVEFL 600
                 H LKAL+ S +S+V  ++ V TY F  +IG Q+KVF+ +K+N KY + VEV  L
Sbjct: 60  EAPRRAHRLKALSGSRISLVPSAKRVPTYLFRTDIGCQVKVFV-EKTNGKYKVLVEVLPL 118

Query: 601 EHCEGQGEL 627
           E  +   EL
Sbjct: 119 ELSDAHSEL 127


>ref|XP_006355876.1| PREDICTED: isoamylase 2, chloroplastic [Solanum tuberosum]
          Length = 878

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 46/129 (35%), Positives = 66/129 (51%)
 Frame = +1

Query: 241 MAMLPVPYVMQSHCLSIEALESSKLFAASCGENGRRVTSDSNKLNLKQKTVHGKLMKPAR 420
           MA  P+   + S  LS  + ES+KL  +S G  G+ V S   KL L+     G      +
Sbjct: 1   MATSPIQLAVHSRLLSYGSTESTKLVPSSSGNRGKIVCS-LRKLELEDMNFSGIGRNNDQ 59

Query: 421 RISYDHHVLKALATSDVSVVKMSENVATYRFMMEIGGQLKVFIKKKSNNKYGLHVEVEFL 600
                 H  KAL+ S +S+V  ++ V TY F  +IGGQ+KV + +++N KY + VEV  L
Sbjct: 60  EAPRRAHRRKALSASRISLVPSAKRVPTYLFRTDIGGQVKVLV-ERTNGKYKVLVEVLPL 118

Query: 601 EHCEGQGEL 627
           E      EL
Sbjct: 119 ELSYAHSEL 127


>ref|NP_001274804.1| isoamylase isoform 2 [Solanum tuberosum] gi|27728147|gb|AAN15318.1|
           isoamylase isoform 2 [Solanum tuberosum]
          Length = 878

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 46/129 (35%), Positives = 66/129 (51%)
 Frame = +1

Query: 241 MAMLPVPYVMQSHCLSIEALESSKLFAASCGENGRRVTSDSNKLNLKQKTVHGKLMKPAR 420
           MA  P+   + S  LS  + ES+KL  +S G  G+ V S   KL L+     G      +
Sbjct: 1   MATSPIQLAVHSRLLSYGSTESTKLVPSSSGNRGKIVCS-LRKLELEDMNFSGIGRNNDQ 59

Query: 421 RISYDHHVLKALATSDVSVVKMSENVATYRFMMEIGGQLKVFIKKKSNNKYGLHVEVEFL 600
                 H  KAL+ S +S+V  ++ V TY F  +IGGQ+KV + +++N KY + VEV  L
Sbjct: 60  EAPRRAHRRKALSASRISLVPSAKRVPTYLFRTDIGGQVKVLV-ERTNGKYKVLVEVLPL 118

Query: 601 EHCEGQGEL 627
           E      EL
Sbjct: 119 ELSYAHSEL 127


>emb|CBI32348.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 11/132 (8%)
 Frame = +1

Query: 241 MAMLPVPYVMQSHCLSIEALESSKLFAASCGENGRRVTSDSNKLNLKQKTVHGKLMKPAR 420
           M  L    V++  C++  A +SSKL AA+    G +V     K++L++K + G + + A 
Sbjct: 1   MTTLIPSLVIRPCCVNCGARDSSKLVAATHYICGNKVAHGLEKMDLERKEILGVVAQNAT 60

Query: 421 RISYDHHVLKALATSDVSVVKMSENVAT-----------YRFMMEIGGQLKVFIKKKSNN 567
           R  + +   K  ATS +++ +     +T           Y F+ EIGGQ+KV + KK N 
Sbjct: 61  RNCFRNINWKVSATSHIAIEETENRYSTTESEELESRLNYLFLTEIGGQVKVIVGKK-NK 119

Query: 568 KYGLHVEVEFLE 603
           KY + +EV  L+
Sbjct: 120 KYIVSIEVSSLQ 131


>ref|XP_002271798.1| PREDICTED: isoamylase 2, chloroplastic [Vitis vinifera]
          Length = 882

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 11/132 (8%)
 Frame = +1

Query: 241 MAMLPVPYVMQSHCLSIEALESSKLFAASCGENGRRVTSDSNKLNLKQKTVHGKLMKPAR 420
           M  L    V++  C++  A +SSKL AA+    G +V     K++L++K + G + + A 
Sbjct: 1   MTTLIPSLVIRPCCVNCGARDSSKLVAATHYICGNKVAHGLEKMDLERKEILGVVAQNAT 60

Query: 421 RISYDHHVLKALATSDVSVVKMSENVAT-----------YRFMMEIGGQLKVFIKKKSNN 567
           R  + +   K  ATS +++ +     +T           Y F+ EIGGQ+KV + KK N 
Sbjct: 61  RNCFRNINWKVSATSHIAIEETENRYSTTESEELESRLNYLFLTEIGGQVKVIVGKK-NK 119

Query: 568 KYGLHVEVEFLE 603
           KY + +EV  L+
Sbjct: 120 KYIVSIEVSSLQ 131


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