BLASTX nr result
ID: Rehmannia23_contig00029424
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00029424
(732 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004292563.1| PREDICTED: putative ribonuclease H protein A... 124 3e-26
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 122 9e-26
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 119 8e-25
ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein A... 119 8e-25
gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indi... 118 2e-24
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe... 118 2e-24
ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623... 116 7e-24
ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612... 116 9e-24
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617... 115 1e-23
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 115 1e-23
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A... 115 1e-23
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 115 1e-23
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622... 112 1e-22
ref|XP_002462405.1| hypothetical protein SORBIDRAFT_02g025125 [S... 112 2e-22
ref|XP_002464654.1| hypothetical protein SORBIDRAFT_01g022742 [S... 111 3e-22
ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein A... 110 5e-22
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 109 1e-21
gb|ABF97084.1| retrotransposon protein, putative, unclassified [... 108 2e-21
ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A... 108 2e-21
ref|XP_002462720.1| hypothetical protein SORBIDRAFT_02g030860 [S... 105 1e-20
>ref|XP_004292563.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 504
Score = 124 bits (311), Expect = 3e-26
Identities = 76/235 (32%), Positives = 114/235 (48%), Gaps = 3/235 (1%)
Frame = +2
Query: 35 VWKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETVEHALRDC 214
+WK +W + KV+IFLW+V HG P SL ++K VS+PLC CG T ET EH L C
Sbjct: 203 IWKILWSIKTLPKVRIFLWRVLHGAAPTMHSLHKRKIVSNPLCPVCGKTEETFEHLLLLC 262
Query: 215 HWSTFFWRASP--VRLNNLMATT-SATMADMLLEMSKIENKDIQCTFAMLLWTLWYARNM 385
HW W SP +R++ TT + + E + + + + W +W R
Sbjct: 263 HWVNPIWFGSPLGIRIDKRKITTFDRWLISIYNHCPSSEREAVLTLISTICWAIWKERCH 322
Query: 386 LVFQDKNIPHQECFMMAVKSLHDFQLARNKQPHPQIRDLCPFWQRPPEGIIKVNSDASVL 565
V+Q + + A +F+ A + ++ L W PP G K+NSDAS
Sbjct: 323 FVYQHREVSPPFTIRAARNLALEFRHASASMRNSRVPRLHMQWLPPPFGHHKINSDASWF 382
Query: 566 PTIGTGIGALLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGLILAKSLQVREV 730
P TG+G ++RD R++ S + SV A+A+A G L SLQ++ +
Sbjct: 383 PPDHTGVGIVIRD-SNRVMIAGSSLLKKCGSVTDAKAVALLVGSELVASLQLQNI 436
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 122 bits (307), Expect = 9e-26
Identities = 73/229 (31%), Positives = 116/229 (50%), Gaps = 3/229 (1%)
Frame = +2
Query: 29 LGVWKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETVEHALR 208
L +W+ IWK IP KV++F WK H L V ++ ++ D C RCG+ ET EH +
Sbjct: 1048 LKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIW 1107
Query: 209 DCHWSTFFWRASPVRLN--NLMATTSATMADMLLEMSKIENKDIQCTFAMLLWTLWYARN 382
C S+ W SP+R++ N+ A + + LL+ K + + F M+ W +W RN
Sbjct: 1108 GCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHK--DTEWWALFWMICWNIWLGRN 1165
Query: 383 MLVFQDKNIPHQECFMMAVKSLHDF-QLARNKQPHPQIRDLCPFWQRPPEGIIKVNSDAS 559
VF+ K + QE AV+ + +F + + P + W PP G++K+N DA+
Sbjct: 1166 KWVFEKKKLAFQEVVERAVRGVMEFEEECAHTSPVETLNTHENGWSVPPVGMVKLNVDAA 1225
Query: 560 VLPTIGTGIGALLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGLILA 706
V +G G+G ++RD EG ++ +AEA + R GL +A
Sbjct: 1226 VFKHVGIGMGGVVRDAEGDVLLATCCGGWAMEDPAMAEACSLRYGLKVA 1274
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 119 bits (299), Expect = 8e-25
Identities = 68/234 (29%), Positives = 116/234 (49%), Gaps = 6/234 (2%)
Frame = +2
Query: 38 WKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETVEHALRDCH 217
WK +W + +P K++IF+W+ A +LP +L ++KC+ DP+C+ C +ETV HAL DC
Sbjct: 1016 WKAVWSMELPEKMKIFMWRAARNLLPTAENLWKRKCLKDPICQGCNREVETVRHALLDCK 1075
Query: 218 WSTFFW--RASPVRLNNLMATTSATMADMLLEMSKIENKDIQCTFAMLLWTLWYARNMLV 391
+ W S V+++N + + + + E+ K W +W+ARN +
Sbjct: 1076 AARKIWYHATSSVQISN---AQNQDILEFIYEVWSTWGKTKAEQTIAFCWAIWFARNKRI 1132
Query: 392 FQDKNIPHQECFMMAVKSLHDFQLARNKQP---HPQIRDLCPFWQRPPEGIIKVNSDASV 562
F+ K + A L + AR H R + W+ PP +KVN DA++
Sbjct: 1133 FEGKKSDPRASAAKAESLLEAYHRARKPDASHIHNVKRIVQKKWEPPPGNFLKVNVDAAI 1192
Query: 563 LPTIG-TGIGALLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGLILAKSLQV 721
G+GA+++D G+I+ +++ + V AEA A GL +A+ L +
Sbjct: 1193 NNRDQVAGLGAVIKDPSGKIVAAGTKQVPLREGVSFAEAEAMEWGLQIARELSL 1246
>ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 393
Score = 119 bits (299), Expect = 8e-25
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 1/226 (0%)
Frame = +2
Query: 32 GVWKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETVEHALRD 211
G WK IW+ N+P KV+ F+W++ ++P RA+LSR+ ++D C CG+ +ET H RD
Sbjct: 49 GCWKKIWQANVPPKVRSFIWRLCLEVIPTRAALSRRLFITDVRCIFCGNEVETGLHLFRD 108
Query: 212 CHWSTFFWRASPVRLNNLMATTSATMADMLLEMSKIENKDIQCTFAMLLWTLWYARNMLV 391
C FW+ +P+ L + S + L M + + ++ F M LWT+W RN ++
Sbjct: 109 CPVVQSFWKHNPLHLRSYSYPGSTLAVWVFLVMDNLSMQQLE-GFFMALWTVWIERNNMI 167
Query: 392 FQDKNIPHQECFMMAVKSLHDFQLARNKQPHPQIRDLCPFWQRPPEGIIKVNSDASVLPT 571
++ + + A++ L +++ K P +++ W PP G +K+N D + L
Sbjct: 168 WRGGSCNPSNMSVWAMQLLEEYKKVHTK-PSVKMKRPRAKWCCPPSGRLKLNIDGAYLED 226
Query: 572 -IGTGIGALLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGLILA 706
GIG ++R+ G + +SR S EA A R L++A
Sbjct: 227 GRKGGIGVVVRNEYGNCVAALSRHMPYASSAMHMEAEALRASLLIA 272
>gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indica Group]
Length = 1300
Score = 118 bits (296), Expect = 2e-24
Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 22/251 (8%)
Frame = +2
Query: 20 KDILGVWKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETVEH 199
+++ W +W ++P KV+IF+W+ A L + +K+ +C CG E V H
Sbjct: 957 QELSKAWNQLWSCHVPQKVRIFIWRAASNSLATMVNKKKKRLEHCSMCSICGTEEEDVAH 1016
Query: 200 ALRDCHWSTFFWRA-SPVRLNNLMATTSATMADMLLEMSKIENKDIQCTFAMLLWTLWYA 376
AL C + + W + + A + T AD + ++S+ +K+ + T M+LW +WY
Sbjct: 1017 ALCRCPHAKYLWEVMRRAKAITVQADRNWTGADWIFDISERISKEERPTLLMMLWRIWYV 1076
Query: 377 RNMLVFQDKNIPHQE---------CFMMAVKSLHDFQLARNKQ-----------PHPQIR 496
RN + +P + ++ ++ D L + K HP++
Sbjct: 1077 RNEITHGKAAVPAEVSQRFISSYITSLLEIRQFPDANLCKGKHVIRCAAAGAQVNHPRVN 1136
Query: 497 DLCPFWQRPPEGIIKVNSDASVLPTIGT-GIGALLRDHEGRIIRVISRKFAQKYSVDVAE 673
+ W RP G +K+N D S P G+ GIGA+LR+ EG++I + S AE
Sbjct: 1137 SVPVRWVRPQAGWMKLNVDGSYDPRDGSGGIGAVLRNSEGKLIFAACGSMCRPVSALEAE 1196
Query: 674 AIACREGLILA 706
+AC+EG+ILA
Sbjct: 1197 LVACKEGIILA 1207
>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 118 bits (295), Expect = 2e-24
Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 5/228 (2%)
Frame = +2
Query: 38 WKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETVEHALRDCH 217
W +WK +PA+V+ F W+V GILP +A+L+RKK D C C ++++ H LRDC
Sbjct: 689 WSLLWKAIVPARVKTFWWRVISGILPTKANLARKKVSLDEECMLCEGPVKSLIHILRDCP 748
Query: 218 WSTFFWRASPVRLNNLMATTSATMADMLLEMSKIENKDIQCTFAMLLWTLWYARNMLVFQ 397
W+ + + D + ++ + TF M+ W +W ARN L++
Sbjct: 749 WN----------------NGAHSPKDWVCRCAEQLSSQDFATFLMVGWAIWEARNGLLWN 792
Query: 398 DKNIPHQECFMMAVKSLHDFQLARN----KQPHPQIRDLCPFWQRPPEGIIKVNSDASVL 565
+K H++ + A LHDF N + QI+ + WQ P E +K+N D +
Sbjct: 793 NKKSRHEQVSLHASLRLHDFLRVSNCLGSQSRQGQIKQM---WQPPHENSLKINVDGAWK 849
Query: 566 P-TIGTGIGALLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGLILA 706
P T G+G ++RD G+ + + K +S EA+A R ILA
Sbjct: 850 PGTTEGGVGVVVRDSTGKFVAGCATKLTNVFSAPQVEALAARTNTILA 897
>ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623801 [Citrus sinensis]
Length = 441
Score = 116 bits (291), Expect = 7e-24
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 8/225 (3%)
Frame = +2
Query: 29 LGVWKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETVEHALR 208
L W IW +P K++IF+W+ +LP ++L R+K V P+C+RCG E V HAL
Sbjct: 119 LSQWNVIWAAELPEKIKIFMWRAVKNLLPTTSNLWRRKIVGSPICRRCGVKNEDVIHALL 178
Query: 209 DCHWSTFFWRASPVRLNNLMATTSATMADMLLEMSKIENKDIQCTFAMLLWTLWYARNML 388
DC + WR + + + +L+E+ + + K +L WT+WY+RN+
Sbjct: 179 DCKVAKKVWRNAGC-AEEIEKLVQQDLMAVLVEIQRKKGKKELELIVVLCWTIWYSRNLF 237
Query: 389 VFQDKNIPHQECFMMAVKSLHDFQLARNKQPHPQI-----RDLCPFWQRPPEGIIKVNSD 553
+F++K Q A +L F+ R K+P +I R+ W PP G K+N D
Sbjct: 238 IFENKREDSQLSIARAEANLDSFR--RIKKPSSKILEKQQRNRKQVWNPPPCGWFKINVD 295
Query: 554 ASV-LPTIGTGIGALLRDHEGRII-RVISRKFAQKYSVDV-AEAI 679
A+V + G+G ++R+ G ++ I R F Q S + AEA+
Sbjct: 296 AAVNVKDQIAGLGVIIRNSNGEVVAAAIQRSFFQLSSTHMEAEAV 340
>ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612946 [Citrus sinensis]
Length = 589
Score = 116 bits (290), Expect = 9e-24
Identities = 65/235 (27%), Positives = 116/235 (49%), Gaps = 4/235 (1%)
Frame = +2
Query: 38 WKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETVEHALRDCH 217
W+ IW+LN+P K++IF+WK +LP+ +L R+K + +P C C E V HAL +C
Sbjct: 271 WQHIWRLNLPEKIKIFVWKATKNLLPMAENLWRRKVLKEPTCHLCKAGCEDVFHALMECR 330
Query: 218 WSTFFWRASPVRLNNLMATTSATMADMLLEMSKIENKDIQCTFAMLLWTLWYARNMLVFQ 397
+ W+ + + N + + M +++ K A + W W+ARN L+FQ
Sbjct: 331 VARKIWKCTHLE-NEVKSVIREDMLSVMIGAMNNWAKSEVDYVATIWWVAWHARNKLLFQ 389
Query: 398 DKNIP--HQECFMMAVKSLHDFQLARNKQPHPQ-IRDLCPFWQRPPEGIIKVNSDASVL- 565
K + V ++ Q + ++ H ++ W PP +KVN DA+V
Sbjct: 390 GKKLDPIGSVAKGKTVMEVYQAQQVKERESHRNTVKGKMQIWTPPPNNKVKVNVDAAVKE 449
Query: 566 PTIGTGIGALLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGLILAKSLQVREV 730
G+G ++R+H G+++ + + ++ +AEA A + G+ +AK L + V
Sbjct: 450 DRKSAGLGVVIRNHRGQVLAAAVKSMNFQGNIAIAEAHAVKWGMEVAKDLSLSSV 504
>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
Length = 1238
Score = 115 bits (289), Expect = 1e-23
Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 8/225 (3%)
Frame = +2
Query: 29 LGVWKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETVEHALR 208
L W IW +P K++IF+W+ +LP ++L R+K V P+C+RCG E V HAL
Sbjct: 916 LSQWNVIWAAELPEKIKIFMWRAVKNLLPTASNLWRRKIVGSPICRRCGVKNEDVIHALL 975
Query: 209 DCHWSTFFWRASPVRLNNLMATTSATMADMLLEMSKIENKDIQCTFAMLLWTLWYARNML 388
DC + WR + + + +L+E+ + + K +L WT+WY++N+
Sbjct: 976 DCKVAKKVWRNAGC-AEEIEKLVQQDLMAVLVEIQRKKGKKELELIVVLCWTIWYSQNLF 1034
Query: 389 VFQDKNIPHQECFMMAVKSLHDFQLARNKQPHPQI-----RDLCPFWQRPPEGIIKVNSD 553
+F++K Q A ++ F+ R K+P +I R+ W PP G K+N D
Sbjct: 1035 IFENKREDSQLSIARAEANMDSFK--RIKKPFSKILEKQQRNRKQVWNPPPSGWFKINVD 1092
Query: 554 ASV-LPTIGTGIGALLRDHEGRII-RVISRKFAQKYSVDV-AEAI 679
A+V + G+G ++R+ G ++ I R F Q S + AEA+
Sbjct: 1093 AAVNVKDQIAGLGVIIRNSNGEVVAAAIQRSFFQLSSTHMEAEAV 1137
>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 769
Score = 115 bits (289), Expect = 1e-23
Identities = 72/241 (29%), Positives = 122/241 (50%), Gaps = 8/241 (3%)
Frame = +2
Query: 14 TTKDILGVWKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETV 193
++K+ W IW L IP KV+IF+W+ + +LP +L +++ + P C+RC ET+
Sbjct: 442 SSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETI 501
Query: 194 EHALRDCHWSTFFWRASPVRLNNLMATTSATMADMLLEMSKIENKDIQCTFAMLLWTLWY 373
H+L DC S W+ + + A + +LL ++ +K + W++W+
Sbjct: 502 FHSLFDCKASRKIWKLTTFE-EEVKALKCKDVLSLLLALADRRSKTEMELIVAVCWSIWH 560
Query: 374 ARNMLVFQDKNIPHQECFMMAVKSLHDFQLARNKQPHPQI-----RDLC--PFWQRPPEG 532
+RN+ +FQ+K +E F ++V + + PQ+ +DL W+ PP G
Sbjct: 561 SRNLFIFQNK----KEDFQLSVAGAEAIVQSYKRIQMPQLQAFSNQDLVSHKHWKCPPAG 616
Query: 533 IIKVNSDASV-LPTIGTGIGALLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGLILAK 709
KVN DA++ L G+G ++R+ EG+ I + VD AEA A R GL +A+
Sbjct: 617 WFKVNVDAAIKLENQRVGLGIVIRNSEGKFITAAIKPSKWLDRVDYAEAEATRFGLEVAE 676
Query: 710 S 712
S
Sbjct: 677 S 677
>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
[Citrus sinensis]
Length = 765
Score = 115 bits (288), Expect = 1e-23
Identities = 72/241 (29%), Positives = 122/241 (50%), Gaps = 8/241 (3%)
Frame = +2
Query: 14 TTKDILGVWKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETV 193
++K+ W IW L IP KV+IF+W+ + +LP +L +++ + P C+RC ET+
Sbjct: 442 SSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETI 501
Query: 194 EHALRDCHWSTFFWRASPVRLNNLMATTSATMADMLLEMSKIENKDIQCTFAMLLWTLWY 373
H+L DC S W+ + + A + +LL ++ +K + W++W+
Sbjct: 502 FHSLFDCKASRKIWKLTTFE-EEVKALKCKDVLSLLLALADRRSKTEMELIVAVCWSIWH 560
Query: 374 ARNMLVFQDKNIPHQECFMMAVKSLHDFQLARNKQPHPQI-----RDLC--PFWQRPPEG 532
+RN+ +FQ+K +E F ++V + + PQ+ +DL W+ PP G
Sbjct: 561 SRNLFIFQNK----KEDFQLSVAGAEAIVQSYKRIQMPQLQAFSDQDLVSHKHWKCPPAG 616
Query: 533 IIKVNSDASV-LPTIGTGIGALLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGLILAK 709
KVN DA++ L G+G ++R+ EG+ I + VD AEA A R GL +A+
Sbjct: 617 WFKVNVDAAIKLENQRVGLGIVIRNSEGKFITAAIKPSKWIDRVDYAEAEATRFGLEVAE 676
Query: 710 S 712
S
Sbjct: 677 S 677
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
[Citrus sinensis]
Length = 968
Score = 115 bits (288), Expect = 1e-23
Identities = 72/241 (29%), Positives = 122/241 (50%), Gaps = 8/241 (3%)
Frame = +2
Query: 14 TTKDILGVWKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETV 193
++K+ W IW L IP KV+IF+W+ + +LP +L +++ + P C+RC ET+
Sbjct: 645 SSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETI 704
Query: 194 EHALRDCHWSTFFWRASPVRLNNLMATTSATMADMLLEMSKIENKDIQCTFAMLLWTLWY 373
H+L DC S W+ + + A + +LL ++ +K + W++W+
Sbjct: 705 FHSLFDCKASRKIWKLTTFE-EEVKALKCKDVLSLLLALADRRSKTEMELIVAVCWSIWH 763
Query: 374 ARNMLVFQDKNIPHQECFMMAVKSLHDFQLARNKQPHPQI-----RDLC--PFWQRPPEG 532
+RN+ +FQ+K +E F ++V + + PQ+ +DL W+ PP G
Sbjct: 764 SRNLFIFQNK----KEDFQLSVAGAEAIVQSYKRIQMPQLQAFSDQDLVSHKHWKCPPAG 819
Query: 533 IIKVNSDASV-LPTIGTGIGALLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGLILAK 709
KVN DA++ L G+G ++R+ EG+ I + VD AEA A R GL +A+
Sbjct: 820 WFKVNVDAAIKLENQRVGLGIVIRNSEGKFITAAIKPSKWIDRVDYAEAEATRFGLEVAE 879
Query: 710 S 712
S
Sbjct: 880 S 880
>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
Length = 1160
Score = 112 bits (280), Expect = 1e-22
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 8/239 (3%)
Frame = +2
Query: 38 WKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETVEHALRDCH 217
W IW L +P K++IF+W+ A +LP +L ++K V +P C+ C IE V HAL DC
Sbjct: 809 WNIIWSLALPKKIRIFVWRAAKNLLPSAENLWKRKIVQEPTCQLCKMGIENVFHALVDCK 868
Query: 218 WSTFFWRASPVRLNNLMATTSATMADMLLEMSKIENKDIQCTFAMLLWTLWYARNMLVFQ 397
+ WR S + ++ A + +L + ++ + FA++LW W ARN +F+
Sbjct: 869 AAKKVWRLSLFYI-DIQAAPGQDILSLLHGVKRMRSNADVDLFAVMLWAKWNARNQWLFK 927
Query: 398 DKN------IPHQECFMMAVKSLH-DFQLARNKQPHPQIRDLCPFWQRPPEGIIKVNSDA 556
K + E M A K + ++ KQ ++ L W P EG +K+N+DA
Sbjct: 928 GKRENPQSVVAKAEAVMEAYKRVQPSADVSHGKQ--QKVAQL--GWNPPQEGFVKINTDA 983
Query: 557 SVLPTIG-TGIGALLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGLILAKSLQVREV 730
+ G+GA++RD G++ + SV AEA A GL +AK V++V
Sbjct: 984 ATNSEKNLAGLGAVIRDENGQVTATAIKVSKFHGSVAYAEAEAMEWGLQVAKDAHVKDV 1042
>ref|XP_002462405.1| hypothetical protein SORBIDRAFT_02g025125 [Sorghum bicolor]
gi|241925782|gb|EER98926.1| hypothetical protein
SORBIDRAFT_02g025125 [Sorghum bicolor]
Length = 457
Score = 112 bits (279), Expect = 2e-22
Identities = 74/236 (31%), Positives = 112/236 (47%), Gaps = 5/236 (2%)
Frame = +2
Query: 38 WKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETVEHALRDCH 217
W IWKL +P KV++F W+V H LP R +L RK C CG E+++H L +C
Sbjct: 177 WSEIWKLKVPPKVKVFWWRVLHEFLPTRLALHRKHIEPIANCDACGADSESIQHVLMECQ 236
Query: 218 WSTFFW----RASPVRLNNLMATTSATMADMLLEMSKIENKDIQCTFAMLLWTLWYARNM 385
+ FW R + V+L L T+ A D++ M + ++ Q + ++ LW RN
Sbjct: 237 IAKSFWEQTKRMTGVKLPPLHPTSWA--YDLIKGM--VISEQAQTIILIGMYALWMQRNR 292
Query: 386 LVFQDKNIPHQECFMMAVKSLHDFQLARNKQPHPQIRDLCPFWQRPPEGIIKVNSDASVL 565
+ P + A+ D Q RN Q +R P W +P G +K N+D +
Sbjct: 293 NRHGAQIWPVKVAVQWAIDLAFDLQQIRNLQ--DPVRTSIPRWVKPEAGWMKCNTDGAFY 350
Query: 566 PTIGTG-IGALLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGLILAKSLQVREV 730
G GA+LRD G +R +R + AEA+ACR+GL +A+ + V
Sbjct: 351 DRQWKGATGAVLRDENGLFVRACARWYDHCLDALTAEALACRDGLKMAQHINADRV 406
>ref|XP_002464654.1| hypothetical protein SORBIDRAFT_01g022742 [Sorghum bicolor]
gi|241918508|gb|EER91652.1| hypothetical protein
SORBIDRAFT_01g022742 [Sorghum bicolor]
Length = 253
Score = 111 bits (277), Expect = 3e-22
Identities = 73/236 (30%), Positives = 118/236 (50%), Gaps = 4/236 (1%)
Frame = +2
Query: 32 GVWKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETVEHALRD 211
G+WK +WKL IP KV++F W+V H LP R L ++ C CG E++ H L
Sbjct: 22 GLWKILWKLEIPPKVKVFWWRVVHEFLPARHILWKRHIEPIAFCAVCGAPEESIAHVLLY 81
Query: 212 CHWSTFFWRASPVRLN-NLMATTSATMADMLLEMSKIENKDIQCTFAMLLWTLWYARNML 388
C + FW V + + + +A+ A L+ S I ++ +WTLW RN
Sbjct: 82 CTVAREFWHQVRVGIGVKIPSLNTASWASDLI--SGICSRQDTTVILCGMWTLWMMRNKR 139
Query: 389 VFQDKNIPHQECFMMAVKSLHD-FQLARNKQPHPQIRD-LCPFWQRPPEGIIKVNSDASV 562
+ ++ Q+ A + +D +Q++ Q Q+ D P W P +G K+NSDA+
Sbjct: 140 RHGELSMSIQQAVTWARDTAYDLWQISHPVQ--LQVPDKASPRWMAPSQGWFKINSDAAF 197
Query: 563 LPTIGTGIGA-LLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGLILAKSLQVRE 727
+G A ++RDH G +R + + + V + EA+ACR+GL+LAK + +
Sbjct: 198 YENKHSGATASVIRDHRGSFHAAQARWYERGFDVCLMEALACRDGLLLAKQQGIHQ 253
>ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 335
Score = 110 bits (275), Expect = 5e-22
Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 7/240 (2%)
Frame = +2
Query: 11 GTTKDILGVWKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIET 190
G ++ W IWKL++P K++IF+WK +LP +L ++ V + CKRCG+ +E
Sbjct: 8 GCSRSNSSKWSIIWKLSLPEKIKIFVWKATKNLLPTAENLCKRGIVQEAHCKRCGNKVEN 67
Query: 191 VEHALRDCHWSTFFWRASPVRLNNLMATTSATMADMLLEMSKIENKDIQCTFAMLLWTLW 370
+ H L C + W+ SPV +S ++ + N D + +LLW +W
Sbjct: 68 ILHVLVTCKAAKKVWQRSPVADAVHKIDSSNLFGELTKLQRSLSNDDFE-LLLVLLWIIW 126
Query: 371 YARNMLVFQDK------NIPHQECFMMAVKSLHDFQLARNKQPHPQIRDLCPFWQRPPEG 532
YARN VF+ ++ E A K ++ K +R W PP
Sbjct: 127 YARNKFVFEGMKIDPGISVAKAEAIKEAYKRTQFPEMLVGKN---SLRQEQNKWAPPPPR 183
Query: 533 IIKVNSDASV-LPTIGTGIGALLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGLILAK 709
+K+N DA++ + +G+GA+++D G+ + K V +AEA A G LAK
Sbjct: 184 WVKINVDAAIDAKSKCSGLGAVIKDPSGKCFVAAVKSVTSKGDVLLAEAEADEWGTYLAK 243
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 109 bits (272), Expect = 1e-21
Identities = 71/246 (28%), Positives = 112/246 (45%), Gaps = 14/246 (5%)
Frame = +2
Query: 35 VWKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETVEHALRDC 214
+++ IWKL++P K+ FLW+ + L V ++L+ + + C RC ETV H L C
Sbjct: 1050 IFQQIWKLDVPPKIHHFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKC 1109
Query: 215 HWSTFFWRASPVRLNNLMATTSATMADML---------LEMSKIENKDIQCTFAMLLWTL 367
++ W SP L A A+ L + S+ E D +LW L
Sbjct: 1110 PFARLTWAISP-----LPAPPGGEWAESLFRNMHHVLSVHKSQPEESDHHALIPWILWRL 1164
Query: 368 WYARNMLVFQDKNIPHQECFMMAVKSLHDFQLARNKQPHPQI----RDLCPFWQRPPEGI 535
W RN LVF+ + + + A + + + K+P PQ+ RD C WQ P G
Sbjct: 1165 WKNRNDLVFKGREFTAPQVILKATEDMDAWN--NRKEPQPQVTSSTRDRCVKWQPPSHGW 1222
Query: 536 IKVNSDASVLPTIGT-GIGALLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGLILAKS 712
+K N+D + +G G+G +LR+H GR++ + R + SV E A R ++
Sbjct: 1223 VKCNTDGAWSKDLGNCGVGWVLRNHTGRLLWLGLRALPSQQSVLETEVEALRWAVLSLSR 1282
Query: 713 LQVREV 730
R V
Sbjct: 1283 FNYRRV 1288
>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1184
Score = 108 bits (270), Expect = 2e-21
Identities = 67/249 (26%), Positives = 123/249 (49%), Gaps = 9/249 (3%)
Frame = +2
Query: 11 GTTKDILGVWKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIET 190
G + VW +WKL IP K++IF W++ HG++P + L+ K C C +E
Sbjct: 851 GASSSSRPVWDNLWKLEIPPKIKIFAWRMLHGVIPCKGILADKHIAVQGGCPVCSSGVED 910
Query: 191 VEHALRDCHWSTFFWRASPV--RLNNLMA---TTSATMADMLLEMSKIENKDIQCTFAML 355
++H + C + W+ + R+ ++ + S + +M+ + K+ + + ++
Sbjct: 911 IKHMVFTCRRAKLIWKQLGIWSRIQPILGFDRSGSVLVEEMIRKGGKVSHLNAIGMTELI 970
Query: 356 L---WTLWYARNMLVFQDKNIPHQECFMMAVKSLHDFQLARNKQPHPQIRDLCPFWQRPP 526
L W +W+ R LV Q + I + M++ +L + NK+ +I++ W++PP
Sbjct: 971 LTGAWYIWWERRQLV-QGERIQNPARSAMSIATLTTNYMLSNKKGKTKIQN---GWKKPP 1026
Query: 527 EGIIKVNSDASVLPTIGT-GIGALLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGLIL 703
EG++ +N DA+ G+ GIG +LRDH G + +AEA A R+GL L
Sbjct: 1027 EGMLMINVDAAFDFDSGSGGIGVVLRDHLGACVAASQAFLPHVLDAPMAEAFALRDGLSL 1086
Query: 704 AKSLQVREV 730
A+ + + V
Sbjct: 1087 AQHIGAKNV 1095
>ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 494
Score = 108 bits (269), Expect = 2e-21
Identities = 72/252 (28%), Positives = 126/252 (50%), Gaps = 24/252 (9%)
Frame = +2
Query: 38 WKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETVEHALRDCH 217
W IWKL +PAK++IF+W+ A +LP +L ++K V + CKRCG+ +E HAL C
Sbjct: 208 WSVIWKLTLPAKIKIFIWRAAKNLLPTAENLWKRKIVHEAYCKRCGNRVENTLHALITCK 267
Query: 218 WSTFFWRASPVRLNNLMATTSATMA--DMLLEM--SKIENKDIQCTFAMLLWTLWYARNM 385
+ W+ SP MA++ M D+L ++ K+ D++ +LW +WY RN
Sbjct: 268 AAKKVWQLSP------MASSFQEMGNPDILGDLGGKKLSRADMEMLMT-ILWVIWYDRNK 320
Query: 386 LVFQDKNIPHQECFMMAVKSLHDFQLARNKQPHPQIRD-------LCPFWQRPPEGIIKV 544
LVF+D + + +++ A + P+I + W PP+G +K+
Sbjct: 321 LVFEDLKLDPR----LSMAKAEAINEAFRRTQFPEITNEGKLQKLKQTVWTPPPQGWLKL 376
Query: 545 NSDASVLPTIG-TGIGALLRDHEGRIIR----------VISRKFAQ--KYSVDVAEAIAC 685
N DA+ G+GA++RD G+ + V+SR A+ +++V +A+ +
Sbjct: 377 NVDATTDSNKSCAGLGAIIRDSTGKCMAAGIKTVKFSGVVSRVEAEATEWAVQIAQQLGM 436
Query: 686 REGLILAKSLQV 721
+ ++ S +V
Sbjct: 437 QSIILETDSQEV 448
>ref|XP_002462720.1| hypothetical protein SORBIDRAFT_02g030860 [Sorghum bicolor]
gi|241926097|gb|EER99241.1| hypothetical protein
SORBIDRAFT_02g030860 [Sorghum bicolor]
Length = 438
Score = 105 bits (263), Expect = 1e-20
Identities = 73/244 (29%), Positives = 110/244 (45%), Gaps = 17/244 (6%)
Frame = +2
Query: 29 LGVWKWIWKLNIPAKVQIFLWKVAHGILPVRASLSRKKCVSDPLCKRCGDTIETVEHALR 208
+G+WK +WKL +P KV++F W+VA+ LP R L +K C+ CGD E++ H L
Sbjct: 185 VGLWKMLWKLQVPPKVRVFWWRVANDFLPARQVLFKKHIEPVAFCEDCGDPEESIRHVLV 244
Query: 209 DCHWSTFFWR------------ASPVRLNNLMATTSATMADMLLEMSKIENKDIQCTFAM 352
D + FW +PV N + + T D L I C
Sbjct: 245 DGSIARIFWHQVRLGTGVKIPTLNPVTWTNDLISGICTTKDTAL---------ILCG--- 292
Query: 353 LLWTLWYARNMLVFQDKNIPHQECFMMAVKSLHDF----QLARNKQPHPQIRDLCPFWQR 520
+W LW RN +K++ + + A + D Q R ++P +++ W+
Sbjct: 293 -MWALWMMRNKRRHGEKSMSVHQAVVWARDTALDLWQISQATRREKPQIELK-----WRP 346
Query: 521 PPEGIIKVNSDASVLPTIGTGIGA-LLRDHEGRIIRVISRKFAQKYSVDVAEAIACREGL 697
P G +KVN+DAS G A ++RDH G +R + EAIACR+ L
Sbjct: 347 PEPGWVKVNADASFQSDGKVGATACVVRDHRGAFRVAQARWYVWGLDACTMEAIACRDAL 406
Query: 698 ILAK 709
+LAK
Sbjct: 407 VLAK 410