BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00028805
         (605 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   271   1e-70
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   265   6e-69
gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis]     264   2e-68
ref|XP_006431260.1| hypothetical protein CICLE_v10011308mg [Citr...   262   6e-68
gb|EOY03563.1| Tetratricopeptide repeat (TPR)-like superfamily p...   261   1e-67
ref|XP_006482717.1| PREDICTED: pentatricopeptide repeat-containi...   260   2e-67
ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containi...   258   9e-67
ref|XP_006338411.1| PREDICTED: pentatricopeptide repeat-containi...   258   1e-66
ref|XP_002305377.2| hypothetical protein POPTR_0004s12430g [Popu...   257   2e-66
ref|XP_004232191.1| PREDICTED: pentatricopeptide repeat-containi...   255   8e-66
gb|EMJ18478.1| hypothetical protein PRUPE_ppa017633mg [Prunus pe...   251   8e-65
ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containi...   245   6e-63
ref|XP_003621319.1| Pentatricopeptide repeat-containing protein ...   239   6e-61
ref|XP_004491871.1| PREDICTED: pentatricopeptide repeat-containi...   236   5e-60
ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containi...   235   6e-60
ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...   232   5e-59
gb|ESW11550.1| hypothetical protein PHAVU_008G039700g [Phaseolus...   229   3e-58
ref|XP_006395295.1| hypothetical protein EUTSA_v10003866mg [Eutr...   226   5e-57
ref|XP_002875497.1| pentatricopeptide repeat-containing protein ...   224   2e-56
ref|NP_189568.1| pentatricopeptide repeat-containing protein [Ar...   222   5e-56

>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score =  271 bits (692), Expect = 1e-70
 Identities = 130/201 (64%), Positives = 159/201 (79%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMP++D VSWNTILDGYVK+G+M +AFELFEKMP+R+VVSWST++ GY+K GD++MA++
Sbjct: 207 DEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDMARI 266

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           LFD MPVKNLV WTIMISGYAEKGLA++AI LY QME+  L+ DDGT +           
Sbjct: 267 LFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGL 326

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHG 540
               K+VH SI ++R KC T VSNALIDMY KCGSL  A S+F+ M  KD+VSWNA+I G
Sbjct: 327 LGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQG 386

Query: 541 LAIHGHGQKALHLFNRMKREG 603
           LA+HGHG+KAL LF+RMK EG
Sbjct: 387 LAMHGHGEKALQLFSRMKGEG 407


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  265 bits (678), Expect = 6e-69
 Identities = 125/201 (62%), Positives = 154/201 (76%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEM ++D VSWNTILDGYVK+G+M  AF LFEKMP R+VVSWST++ GY KTGD+EMA++
Sbjct: 213 DEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARM 272

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           LFD MP KNLVTWTI+ISG+AEKGLA+EA  LY QME   L+PDDGT +           
Sbjct: 273 LFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGL 332

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHG 540
               KKVH SI K R KC   VSNAL+DMY KCG +++A S+FNEM  +DLVSWN M+ G
Sbjct: 333 LVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQG 392

Query: 541 LAIHGHGQKALHLFNRMKREG 603
           LA+HGHG+KA+ LF++M++EG
Sbjct: 393 LAMHGHGEKAIQLFSKMQQEG 413



 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
 Frame = +1

Query: 133 VIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPD 312
           +I  ++    + +A  +F+ +   N+  +  +I  + +   + +A   +  M+K  L  D
Sbjct: 61  LISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFAD 120

Query: 313 DGTFVXXXXXXXXXXXXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSL--NRAWSV 486
           + T+                + +H  + K        V N+LID Y KCG L  N A  +
Sbjct: 121 NFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKL 180

Query: 487 FNEMESKDLVSWNAMIHGLAIHGHGQKALHLFNRM 591
           F EM  KDLVSWN+MI GL   G   +A  LF+ M
Sbjct: 181 FMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEM 215


>gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis]
          Length = 599

 Score =  264 bits (674), Expect = 2e-68
 Identities = 122/200 (61%), Positives = 155/200 (77%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMP++D V+WNT+LDGYVK+G M  AFE F++MP R+VVSWST++ GY++ GD++MA++
Sbjct: 209 DEMPERDLVTWNTMLDGYVKAGQMSEAFEFFQRMPERNVVSWSTIVSGYSRAGDMDMARI 268

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           LFD MPVKNLVTWTI++SGYA KG+A EA  LY QME   L+ DDGT +           
Sbjct: 269 LFDKMPVKNLVTWTIIVSGYAAKGIANEANSLYDQMEDAGLKFDDGTIISVLAACAESGL 328

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHG 540
               +KVH S+ + R +CCT VSNAL+DMY KCGSL++A+ VFN + +KDLVSWNAMIHG
Sbjct: 329 LGLGEKVHASMDRIRYRCCTPVSNALVDMYAKCGSLDKAYKVFNGIGNKDLVSWNAMIHG 388

Query: 541 LAIHGHGQKALHLFNRMKRE 600
           LAIHGHG+KAL LF RMK+E
Sbjct: 389 LAIHGHGEKALWLFGRMKKE 408



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
 Frame = +1

Query: 34  NTILDGYVKSGDM--VSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKN 207
           N ++D Y K G +   +A +LF  M  RDVVSW++++ G  K G++  A+ LFD MP ++
Sbjct: 156 NALIDSYSKCGPVGVFAAKKLFLAMGVRDVVSWNSMVGGLVKVGELGEARQLFDEMPERD 215

Query: 208 LVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHR 387
           LVTW  M+ GY + G   EA   + +M                                 
Sbjct: 216 LVTWNTMLDGYVKAGQMSEAFEFFQRM--------------------------------- 242

Query: 388 SITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHGLAIHGHGQK 567
                 P+   V  + ++  Y + G ++ A  +F++M  K+LV+W  ++ G A  G   +
Sbjct: 243 ------PERNVVSWSTIVSGYSRAGDMDMARILFDKMPVKNLVTWTIIVSGYAAKGIANE 296

Query: 568 ALHLFNRMKREG 603
           A  L+++M+  G
Sbjct: 297 ANSLYDQMEDAG 308



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
 Frame = +1

Query: 133 VIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPD 312
           +I  ++    + +A  +FD +P  N+  +  MI  + +     +A   +  M+   + PD
Sbjct: 57  LIAAFSLCRQIALAVNVFDQIPEPNVHVFNAMIRAHTQNSQGPQAFAAFFNMQSNGVSPD 116

Query: 313 DGTFVXXXXXXXXXXXXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLN--RAWSV 486
           + T+                + VH  I K        V NALID Y KCG +    A  +
Sbjct: 117 NYTYSFLLKACSGKAWLSVVQMVHTHIEKCGFCSDIFVPNALIDSYSKCGPVGVFAAKKL 176

Query: 487 FNEMESKDLVSWNAMIHGLAIHGHGQKALHLFNRM 591
           F  M  +D+VSWN+M+ GL   G   +A  LF+ M
Sbjct: 177 FLAMGVRDVVSWNSMVGGLVKVGELGEARQLFDEM 211


>ref|XP_006431260.1| hypothetical protein CICLE_v10011308mg [Citrus clementina]
           gi|557533317|gb|ESR44500.1| hypothetical protein
           CICLE_v10011308mg [Citrus clementina]
          Length = 614

 Score =  262 bits (669), Expect = 6e-68
 Identities = 127/201 (63%), Positives = 153/201 (76%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMP++D VSWNTILDGY K+G+M  AFELFEK+P R++VSWST+++GY+K GD+EMAK+
Sbjct: 216 DEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKL 275

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           LFD MP K LV WTI+ISGYAEKG+A+EA  LY QME+  L+PDDGT +           
Sbjct: 276 LFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACTESGL 335

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHG 540
                KVH SI K R KC T V NAL+DMY KCGSL+ A SVFN M  KDLVSWNAM++G
Sbjct: 336 LGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYG 395

Query: 541 LAIHGHGQKALHLFNRMKREG 603
           LA+HG G+KAL LF+RMK EG
Sbjct: 396 LAMHGQGEKALGLFSRMKDEG 416


>gb|EOY03563.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao]
          Length = 672

 Score =  261 bits (666), Expect = 1e-67
 Identities = 122/201 (60%), Positives = 155/201 (77%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMPQ+D VSWNTILDGYVK+G+M  AFELF+K+P R+VVSWST++ GY+K GD++MA+V
Sbjct: 272 DEMPQRDMVSWNTILDGYVKAGEMEKAFELFQKIPQRNVVSWSTMVSGYSKAGDMDMARV 331

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           LFD MPVK LV WTI+ISGYAEKGLA+EAI LY +ME+  L+ DDGT +           
Sbjct: 332 LFDRMPVKTLVPWTIIISGYAEKGLAKEAIELYDRMEQDGLELDDGTVIGILAACAESGL 391

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHG 540
                KVH SI + R +C   V NAL+DMY KCGSL++AWSVFN M  +D+VSWNAM+ G
Sbjct: 392 LAVGVKVHNSIERLRFRCSIAVCNALVDMYAKCGSLDKAWSVFNGMPKRDVVSWNAMLQG 451

Query: 541 LAIHGHGQKALHLFNRMKREG 603
            A+HGHG++AL +F+R+K+EG
Sbjct: 452 FAMHGHGKEALQVFSRLKKEG 472



 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 2/192 (1%)
 Frame = +1

Query: 34  NTILDGYVKSGDM--VSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKN 207
           N ++D Y K G++   +A +LF  M  RDVVSW+++I G  K G++  A+ LFD MP ++
Sbjct: 219 NALIDSYSKFGELGIKAALKLFMVMEDRDVVSWNSMIGGLLKVGELREARKLFDEMPQRD 278

Query: 208 LVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHR 387
           +V+W  ++ GY + G   +A  L+ ++                                 
Sbjct: 279 MVSWNTILDGYVKAGEMEKAFELFQKI--------------------------------- 305

Query: 388 SITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHGLAIHGHGQK 567
                 P+   V  + ++  Y K G ++ A  +F+ M  K LV W  +I G A  G  ++
Sbjct: 306 ------PQRNVVSWSTMVSGYSKAGDMDMARVLFDRMPVKTLVPWTIIISGYAEKGLAKE 359

Query: 568 ALHLFNRMKREG 603
           A+ L++RM+++G
Sbjct: 360 AIELYDRMEQDG 371



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
 Frame = +1

Query: 133 VIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPD 312
           +I  ++    + +A  +F+ +   N+  +  +I  Y +     +A   +  M+   +  D
Sbjct: 123 LISAFSLCRQITLALTVFNQIQDPNVHLYNNLIRAYVQNSQPSQAFSFFFDMQWNGILAD 182

Query: 313 DGTFVXXXXXXXXXXXXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLN--RAWSV 486
           + T+                + +H  I K+       V NALID Y K G L    A  +
Sbjct: 183 NFTYTFLLKACTDLKMV---EMIHTQIEKNGFLSDIFVPNALIDSYSKFGELGIKAALKL 239

Query: 487 FNEMESKDLVSWNAMIHGLAIHGHGQKALHLFNRM 591
           F  ME +D+VSWN+MI GL   G  ++A  LF+ M
Sbjct: 240 FMVMEDRDVVSWNSMIGGLLKVGELREARKLFDEM 274


>ref|XP_006482717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Citrus sinensis]
          Length = 614

 Score =  260 bits (664), Expect = 2e-67
 Identities = 127/201 (63%), Positives = 152/201 (75%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMP++D VSWNTILDGY K+G+M  AFELFEK+P R++VSWST+I+GY+K  D+EMAK+
Sbjct: 216 DEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMIWGYSKDADMEMAKL 275

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           LFD MP K LV WTI+ISGYAEKG+A+EA  LY QME+  L+PDDGT +           
Sbjct: 276 LFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGL 335

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHG 540
                KVH SI K R KC T V NAL+DMY KCGSL+ A SVFN M  KDLVSWNAM++G
Sbjct: 336 LGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYG 395

Query: 541 LAIHGHGQKALHLFNRMKREG 603
           LA+HG G+KAL LF+RMK EG
Sbjct: 396 LAMHGQGEKALGLFSRMKDEG 416


>ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 601

 Score =  258 bits (659), Expect = 9e-67
 Identities = 121/201 (60%), Positives = 154/201 (76%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMP+KD +SWNT+LDGYVK G M  AF+LF++MP R+VVSWST++ GY K GD+EMA++
Sbjct: 211 DEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARM 270

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           LFD MPVKNLV+WTI++SG+AEKGLAREAI L+ QMEK  L+ D+GT +           
Sbjct: 271 LFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGL 330

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHG 540
               +K+H SI  +  KC T +SNAL+DMY KCG LN A+ VFN++++KD+VSWNAM+ G
Sbjct: 331 LGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQG 390

Query: 541 LAIHGHGQKALHLFNRMKREG 603
           LA+HGHG KAL LF RMK EG
Sbjct: 391 LAMHGHGVKALELFKRMKEEG 411



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
 Frame = +1

Query: 169 MAKVLFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXX 348
           +A   F+ +   N+  +  MI  ++      +A   +  M++     D+ TF        
Sbjct: 70  LATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCT 129

Query: 349 XXXXXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGS--LNRAWSVFNEMESK-DLVS 519
                   + VH  I K        V N+LID Y KCGS  ++ A  +F  M ++ D+VS
Sbjct: 130 GNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVS 189

Query: 520 WNAMIHGLAIHGHGQKALHLFNRM 591
           WN+MI GLA  G  ++A  +F+ M
Sbjct: 190 WNSMISGLAKGGLYEEARKVFDEM 213


>ref|XP_006338411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Solanum tuberosum]
          Length = 602

 Score =  258 bits (658), Expect = 1e-66
 Identities = 127/201 (63%), Positives = 151/201 (75%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMPQ+DRVSWNT+LDGY K+  M  AFELF+ MP RDVVSWST++ GY K GD+EMA++
Sbjct: 209 DEMPQRDRVSWNTMLDGYTKAEQMSVAFELFKTMPQRDVVSWSTMVSGYCKAGDLEMARM 268

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           LFD MP KNLV+WTIMISGYAEKGL  EAI L+ QME+T L+ D   FV           
Sbjct: 269 LFDKMPSKNLVSWTIMISGYAEKGLVNEAIQLFMQMEETGLRLDVAAFVSILAACAESGM 328

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHG 540
               KKVH S+ +S  KC T+V NALIDMY KCG L++A+ VFN +E +DLVSWNAMIHG
Sbjct: 329 LSLGKKVHDSVERSTYKCNTLVCNALIDMYAKCGCLHKAYKVFNGLEKRDLVSWNAMIHG 388

Query: 541 LAIHGHGQKALHLFNRMKREG 603
           LA+HG G+KAL LF RMK+EG
Sbjct: 389 LAMHGRGKKALELFFRMKQEG 409



 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 2/192 (1%)
 Frame = +1

Query: 34  NTILDGYVKSG--DMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKN 207
           N+++D Y K G   +  A +LF  M  RDVVSW+++I    K GD+  A+ LFD MP ++
Sbjct: 156 NSLIDAYSKCGLVGVRIAGQLFWGMKERDVVSWNSMISALLKVGDLSEARKLFDEMPQRD 215

Query: 208 LVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHR 387
            V+W  M+ GY +      A  L+                                    
Sbjct: 216 RVSWNTMLDGYTKAEQMSVAFELF------------------------------------ 239

Query: 388 SITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHGLAIHGHGQK 567
              K+ P+   V  + ++  YCK G L  A  +F++M SK+LVSW  MI G A  G   +
Sbjct: 240 ---KTMPQRDVVSWSTMVSGYCKAGDLEMARMLFDKMPSKNLVSWTIMISGYAEKGLVNE 296

Query: 568 ALHLFNRMKREG 603
           A+ LF +M+  G
Sbjct: 297 AIQLFMQMEETG 308


>ref|XP_002305377.2| hypothetical protein POPTR_0004s12430g [Populus trichocarpa]
           gi|550340897|gb|EEE85888.2| hypothetical protein
           POPTR_0004s12430g [Populus trichocarpa]
          Length = 604

 Score =  257 bits (657), Expect = 2e-66
 Identities = 123/201 (61%), Positives = 151/201 (75%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMP KD VSWNTILDGYVK+G+M  AF LFE MP R+VVSWST++ GY K GD+EMA++
Sbjct: 213 DEMPMKDAVSWNTILDGYVKAGEMNKAFGLFESMPERNVVSWSTMVSGYCKAGDMEMARM 272

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           LFD MPVKNLV+WTI++SGYA KGLA++AI  + QME+  L+PDDGT +           
Sbjct: 273 LFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTIISILASCAESGL 332

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHG 540
               K+VH SI + R KC   VSNAL+DMY KCG ++RA SVFN M  KDLVSWN M+ G
Sbjct: 333 LGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQG 392

Query: 541 LAIHGHGQKALHLFNRMKREG 603
           LA+HGHG+KAL LF+ M++EG
Sbjct: 393 LAMHGHGEKALQLFSIMRQEG 413



 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
 Frame = +1

Query: 133 VIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPD 312
           +I  ++ + ++ +A  +F  +P  N+  +   I    +   +  A   + +M++  L  D
Sbjct: 61  LISAFSLSQEMTLAINVFKQIPDPNVHLYNTFIRACVQNSHSLLAFETFFEMQRNGLFAD 120

Query: 313 DGTFVXXXXXXXXXXXXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLN--RAWSV 486
           + T+                K +H  + K        V N+LID YCKCG L    A  +
Sbjct: 121 NFTYPFLLKACDGQSWLPLVKMIHNHLEKYGFFQDLFVPNSLIDSYCKCGLLGVKSAMRL 180

Query: 487 FNEMESKDLVSWNAMIHGLAIHGHGQKALHLFNRM 591
           F  M+ +D+VSWN+MI GL   G   +A  LF+ M
Sbjct: 181 FKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEM 215


>ref|XP_004232191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Solanum lycopersicum]
          Length = 602

 Score =  255 bits (651), Expect = 8e-66
 Identities = 126/201 (62%), Positives = 151/201 (75%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMPQ+DRVSWNT+LDGY K+  M  AFELF+ MP RDVVSWST++ GY K GD+EMA++
Sbjct: 209 DEMPQRDRVSWNTMLDGYTKAEQMSVAFELFKTMPQRDVVSWSTMVSGYCKAGDLEMARM 268

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           LFD MP KNLV+WTIMISGYAEKGL  EAI L+ QME+T L+ D   FV           
Sbjct: 269 LFDKMPSKNLVSWTIMISGYAEKGLINEAILLFMQMEETGLRLDVAAFVSILAACAESGM 328

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHG 540
               KKVH S+ +S  KC T+V NALIDMY KCG L++A+ VFN ++ +DLVSWNAMIHG
Sbjct: 329 LSLGKKVHDSVERSMYKCNTLVCNALIDMYAKCGCLHKAYKVFNGLKKRDLVSWNAMIHG 388

Query: 541 LAIHGHGQKALHLFNRMKREG 603
           LA+HG G+KAL LF RMK+EG
Sbjct: 389 LAMHGRGKKALELFIRMKQEG 409



 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 2/192 (1%)
 Frame = +1

Query: 34  NTILDGYVKSG--DMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKN 207
           N+++D Y K G   +  A +LF  M  RDVVSW+++I    K GD+  A+ LFD MP ++
Sbjct: 156 NSLIDAYSKCGLVGVRIAGQLFWGMKERDVVSWNSMISALLKVGDLSEARKLFDEMPQRD 215

Query: 208 LVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHR 387
            V+W  M+ GY +      A  L+                                    
Sbjct: 216 RVSWNTMLDGYTKAEQMSVAFELF------------------------------------ 239

Query: 388 SITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHGLAIHGHGQK 567
              K+ P+   V  + ++  YCK G L  A  +F++M SK+LVSW  MI G A  G   +
Sbjct: 240 ---KTMPQRDVVSWSTMVSGYCKAGDLEMARMLFDKMPSKNLVSWTIMISGYAEKGLINE 296

Query: 568 ALHLFNRMKREG 603
           A+ LF +M+  G
Sbjct: 297 AILLFMQMEETG 308


>gb|EMJ18478.1| hypothetical protein PRUPE_ppa017633mg [Prunus persica]
          Length = 603

 Score =  251 bits (642), Expect = 8e-65
 Identities = 121/201 (60%), Positives = 149/201 (74%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMP KD VSWNTILDGY K+G M  AFELFE+MP R+VVSWST++ GY+K GD+ MA++
Sbjct: 207 DEMPDKDAVSWNTILDGYAKAGQMNEAFELFERMPQRNVVSWSTLVSGYSKAGDMGMARM 266

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           +FD MP +NLV WTI+ISGYAEKGLA+EAI LY QME+  L+PD+G  +           
Sbjct: 267 MFDKMPFRNLVPWTIIISGYAEKGLAKEAIMLYDQMEEAGLKPDNGAIISILAACAESGL 326

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHG 540
               +KVH SI ++R KC T VSNAL+DMY KCG L+ A  VF+ +  KDLVSWNAM+ G
Sbjct: 327 IGLGRKVHASIERTRFKCSTPVSNALLDMYAKCGMLDEASRVFHGIAKKDLVSWNAMLQG 386

Query: 541 LAIHGHGQKALHLFNRMKREG 603
           LA+HGHG KAL LF+RM + G
Sbjct: 387 LAMHGHGDKALQLFSRMVKAG 407



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 2/192 (1%)
 Frame = +1

Query: 34  NTILDGYVKSG--DMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKN 207
           N+++D Y K G   +  A ++F  M  RD+VSW+++I G AKTG++  A+ LFD MP K+
Sbjct: 154 NSLIDTYSKCGLLGVSEAKKMFMLMGERDIVSWNSMIGGLAKTGELGEARRLFDEMPDKD 213

Query: 208 LVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHR 387
            V+W  ++ GYA+ G   EA  L+ +M                                 
Sbjct: 214 AVSWNTILDGYAKAGQMNEAFELFERM--------------------------------- 240

Query: 388 SITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHGLAIHGHGQK 567
                 P+   V  + L+  Y K G +  A  +F++M  ++LV W  +I G A  G  ++
Sbjct: 241 ------PQRNVVSWSTLVSGYSKAGDMGMARMMFDKMPFRNLVPWTIIISGYAEKGLAKE 294

Query: 568 ALHLFNRMKREG 603
           A+ L+++M+  G
Sbjct: 295 AIMLYDQMEEAG 306



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
 Frame = +1

Query: 109 RDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQM 288
           +D+ +   +I  ++    + +A  +F+ +   N+  +  +I  + +     +A   +  M
Sbjct: 47  QDLHTAPKLIAAFSLCRQMALAVNVFNQVQDPNVHLYNTLIRAHIQNSQTTQAFATFFDM 106

Query: 289 EKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSL 468
           +   + PD+ T+                + +H SI K        V N+LID Y KCG L
Sbjct: 107 QLNGVYPDNFTYPFLLKACSGRPWFPVVQMIHTSIEKFGFCLDIFVPNSLIDTYSKCGLL 166

Query: 469 --NRAWSVFNEMESKDLVSWNAMIHGLAIHGHGQKALHLFNRM 591
             + A  +F  M  +D+VSWN+MI GLA  G   +A  LF+ M
Sbjct: 167 GVSEAKKMFMLMGERDIVSWNSMIGGLAKTGELGEARRLFDEM 209


>ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Fragaria vesca subsp. vesca]
          Length = 605

 Score =  245 bits (626), Expect = 6e-63
 Identities = 117/201 (58%), Positives = 149/201 (74%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMP++D VSWN+ILDGY K+G M  AFELFE+MP R+VVSWST++ GY+K GD+ MA++
Sbjct: 209 DEMPERDAVSWNSILDGYAKAGKMDEAFELFERMPQRNVVSWSTLVSGYSKVGDMGMARM 268

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           +FD MP KNLV WTI+ISGYA+KGLA+EAI LY QME   L+ D+G  +           
Sbjct: 269 MFDRMPFKNLVPWTIIISGYAQKGLAKEAIMLYDQMEGDGLKLDNGAIISILAACAESGL 328

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHG 540
               KKVH SI ++R KC T V NAL+DMY KCG L  A+ VF+ +  KDLVSWN+M+ G
Sbjct: 329 IALGKKVHESIERNRFKCSTPVLNALLDMYAKCGGLEEAYRVFDGIARKDLVSWNSMLQG 388

Query: 541 LAIHGHGQKALHLFNRMKREG 603
           LA+HGHG+KAL LF+RM++ G
Sbjct: 389 LAMHGHGEKALQLFSRMEKAG 409



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 2/192 (1%)
 Frame = +1

Query: 34  NTILDGYVKSG--DMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKN 207
           N+++D Y K G   + +A +LF  M  +D+VSW+++I G A+ G++  A+ LFD MP ++
Sbjct: 156 NSLIDTYSKCGLEGVGAARKLFRVMEEKDIVSWNSMIGGLARAGELSDARQLFDEMPERD 215

Query: 208 LVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHR 387
            V+W  ++ GYA+ G   EA  L+ +M                                 
Sbjct: 216 AVSWNSILDGYAKAGKMDEAFELFERM--------------------------------- 242

Query: 388 SITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHGLAIHGHGQK 567
                 P+   V  + L+  Y K G +  A  +F+ M  K+LV W  +I G A  G  ++
Sbjct: 243 ------PQRNVVSWSTLVSGYSKVGDMGMARMMFDRMPFKNLVPWTIIISGYAQKGLAKE 296

Query: 568 ALHLFNRMKREG 603
           A+ L+++M+ +G
Sbjct: 297 AIMLYDQMEGDG 308


>ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496334|gb|AES77537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 605

 Score =  239 bits (609), Expect = 6e-61
 Identities = 113/202 (55%), Positives = 149/202 (73%), Gaps = 1/202 (0%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMP++DRVSWNT+LDG+ K+G+M  AF+LFE+M  RD+VSWST++ GY+K GD++MA++
Sbjct: 214 DEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARM 273

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           LFD  PVKNLV WT +ISGYAEKG  +EA+ L  +MEK+ L+ DDG F+           
Sbjct: 274 LFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGM 333

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMES-KDLVSWNAMIH 537
               KK+H S  +SR +C T V N+ IDMY KCG ++ A+ VFN M++ KDLVSWN+MIH
Sbjct: 334 LGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIH 393

Query: 538 GLAIHGHGQKALHLFNRMKREG 603
           G  IHGHG+K++ LFN M REG
Sbjct: 394 GFGIHGHGEKSIELFNTMVREG 415



 Score = 82.8 bits (203), Expect = 7e-14
 Identities = 49/190 (25%), Positives = 90/190 (47%)
 Frame = +1

Query: 34  NTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLV 213
           N+++D Y + GD+  A ++F  M  RDVVSW++++ G  K GD++ A  +FD MP ++ V
Sbjct: 163 NSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRV 222

Query: 214 TWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHRSI 393
           +W  M+ G+ + G   +A  L+ +M +  +                              
Sbjct: 223 SWNTMLDGFTKAGEMDKAFKLFERMAERDI------------------------------ 252

Query: 394 TKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHGLAIHGHGQKAL 573
                    V  + ++  Y K G ++ A  +F+    K+LV W  +I G A  G  ++A+
Sbjct: 253 ---------VSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAM 303

Query: 574 HLFNRMKREG 603
           +L + M++ G
Sbjct: 304 NLCDEMEKSG 313



 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 4/157 (2%)
 Frame = +1

Query: 133 VIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQ-- 306
           +I  Y+ T ++  A  +F+ +P  N+  +  +I  Y+  G    ++  +G + K  +   
Sbjct: 60  LIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGV 119

Query: 307 -PDDGTF-VXXXXXXXXXXXXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAW 480
             D+ T+                 K VH  + K        V N+LID YC+CG +  A 
Sbjct: 120 LADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAM 179

Query: 481 SVFNEMESKDLVSWNAMIHGLAIHGHGQKALHLFNRM 591
            VF+ ME +D+VSWN+M+ GL  +G    AL +F+ M
Sbjct: 180 KVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEM 216


>ref|XP_004491871.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like, partial [Cicer arietinum]
          Length = 442

 Score =  236 bits (601), Expect = 5e-60
 Identities = 110/202 (54%), Positives = 145/202 (71%), Gaps = 1/202 (0%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMP++D VSWNT+LDG+ K+ +M  AF++FE+M  RD++SWST++ GY+K GD++MA++
Sbjct: 225 DEMPERDMVSWNTVLDGFAKAREMEKAFDVFERMGERDIISWSTMVCGYSKKGDMDMARM 284

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           LFD  P+KNLV WT +ISGYAEKG  +EA GLY +ME+  L+P+DG  +           
Sbjct: 285 LFDRCPMKNLVLWTTIISGYAEKGQVKEATGLYDEMEEAGLRPNDGFLISILAACAESGM 344

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEME-SKDLVSWNAMIH 537
               KK+H SI K R +C T V NA IDMY KCG L+ A+ VF+ M+  KDLVSWN+MIH
Sbjct: 345 LGLGKKIHDSIQKCRFRCSTKVLNAFIDMYAKCGCLDAAFGVFSGMKVKKDLVSWNSMIH 404

Query: 538 GLAIHGHGQKALHLFNRMKREG 603
           G  IHGHG+KA+ LF RM  EG
Sbjct: 405 GFGIHGHGEKAIELFTRMVHEG 426



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 45/190 (23%), Positives = 86/190 (45%)
 Frame = +1

Query: 34  NTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLV 213
           N+++D Y + G + +A   F  M  RDVVSW++++ G  K GD + A  +FD MP +++V
Sbjct: 174 NSLIDCYCRCGSVDTAMRFFLGMEERDVVSWNSMVGGLVKCGDFDGALKMFDEMPERDMV 233

Query: 214 TWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHRSI 393
           +W  ++ G+A+     +A  ++ +M +  +                              
Sbjct: 234 SWNTVLDGFAKAREMEKAFDVFERMGERDI------------------------------ 263

Query: 394 TKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHGLAIHGHGQKAL 573
                    +  + ++  Y K G ++ A  +F+    K+LV W  +I G A  G  ++A 
Sbjct: 264 ---------ISWSTMVCGYSKKGDMDMARMLFDRCPMKNLVLWTTIISGYAEKGQVKEAT 314

Query: 574 HLFNRMKREG 603
            L++ M+  G
Sbjct: 315 GLYDEMEEAG 324



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 9/178 (5%)
 Frame = +1

Query: 85  ELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMISGYAEKGLARE 264
           +L +    +D+     +I  Y+    +  A  +F+ +P  N+  +  +I  +       +
Sbjct: 50  QLIKSSLHQDLYIAPKLIAAYSLNSHITSAVNVFNQVPDPNVHLYNYLIRAHVRNNNDND 109

Query: 265 ---------AIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRPKCC 417
                    AI  + +M+   + PD+ T+                + VH  + K      
Sbjct: 110 NNDDLNTSLAIETFLKMQVNGVLPDNFTYPFVLKGCNGRKWLSLVRMVHAHVEKLGFYGD 169

Query: 418 TVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHGLAIHGHGQKALHLFNRM 591
             V N+LID YC+CGS++ A   F  ME +D+VSWN+M+ GL   G    AL +F+ M
Sbjct: 170 IFVPNSLIDCYCRCGSVDTAMRFFLGMEERDVVSWNSMVGGLVKCGDFDGALKMFDEM 227


>ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  235 bits (600), Expect = 6e-60
 Identities = 112/202 (55%), Positives = 146/202 (72%), Gaps = 1/202 (0%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMP++D VSWNT+LDGY K+G+M  AFELFE+MP R++VSWST++ GY+K GD++MA+V
Sbjct: 212 DEMPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARV 271

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           LFD  P KN+V WT +I+GYAEKG  REA  LYG+ME+  L+PDDG  +           
Sbjct: 272 LFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGM 331

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFN-EMESKDLVSWNAMIH 537
               K++H S+ + R +C T V NA IDMY KCG L+ A+ VF+  M  KD+VSWN+MI 
Sbjct: 332 LGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQ 391

Query: 538 GLAIHGHGQKALHLFNRMKREG 603
           G A+HGHG+KAL LF+RM  EG
Sbjct: 392 GFAMHGHGEKALELFSRMVPEG 413



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 2/192 (1%)
 Frame = +1

Query: 34  NTILDGYVKSGD--MVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKN 207
           N+++D Y + G   +  A  LF  M  RDVV+W+++I G  + G++E A  LFD MP ++
Sbjct: 159 NSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPERD 218

Query: 208 LVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHR 387
           +V+W  M+ GYA+ G    A  L+ +M                                 
Sbjct: 219 MVSWNTMLDGYAKAGEMDRAFELFERM--------------------------------- 245

Query: 388 SITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHGLAIHGHGQK 567
                 P+   V  + ++  Y K G ++ A  +F+   +K++V W  +I G A  G  ++
Sbjct: 246 ------PQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVRE 299

Query: 568 ALHLFNRMKREG 603
           A  L+ +M+  G
Sbjct: 300 ATELYGKMEEAG 311



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
 Frame = +1

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREA-IGLYGQMEKTKLQPDDGTFVXXXXXXXXXX 357
           +F+++P  N+  +  +I  +A            + QM+K  L PD+ T+           
Sbjct: 75  VFNHVPHPNVHLYNSIIRAHAHNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPS 134

Query: 358 XXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGS--LNRAWSVFNEMESKDLVSWNAM 531
                + +H  + K        V N+LID Y +CGS  L+ A S+F  M+ +D+V+WN+M
Sbjct: 135 SLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSM 194

Query: 532 IHGLAIHGHGQKALHLFNRM 591
           I GL   G  + A  LF+ M
Sbjct: 195 IGGLVRCGELEGACKLFDEM 214


>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  232 bits (592), Expect = 5e-59
 Identities = 111/202 (54%), Positives = 148/202 (73%), Gaps = 1/202 (0%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMP +D VSWNT+LDGY K+G+M +AFELFE+MP R++VSWST++ GY+K GD++MA++
Sbjct: 212 DEMPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGDMDMARM 271

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           LFD  PVKN+V WT +I+GYAEKGLAREA  LYG+ME+  ++PDDG  +           
Sbjct: 272 LFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFLLSILAACAESGM 331

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFN-EMESKDLVSWNAMIH 537
               K++H S+ + R +C   V NA IDMY KCG L+ A+ VF+  M  KD+VSWN+MI 
Sbjct: 332 LGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQ 391

Query: 538 GLAIHGHGQKALHLFNRMKREG 603
           G A+HGHG+KAL LF+ M +EG
Sbjct: 392 GFAMHGHGEKALELFSWMVQEG 413



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 2/192 (1%)
 Frame = +1

Query: 34  NTILDGYVKSGD--MVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKN 207
           N+++D Y + G+  +  A  LF  M  RDVV+W+++I G  + G+++ A  LFD MP ++
Sbjct: 159 NSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEMPDRD 218

Query: 208 LVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHR 387
           +V+W  M+ GYA+ G    A  L+ +M                                 
Sbjct: 219 MVSWNTMLDGYAKAGEMDTAFELFERM--------------------------------- 245

Query: 388 SITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHGLAIHGHGQK 567
                 P    V  + ++  Y K G ++ A  +F+    K++V W  +I G A  G  ++
Sbjct: 246 ------PWRNIVSWSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLARE 299

Query: 568 ALHLFNRMKREG 603
           A  L+ +M+  G
Sbjct: 300 ATELYGKMEEAG 311



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
 Frame = +1

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREA-IGLYGQMEKTKLQPDDGTFVXXXXXXXXXX 357
           +F+++P  N+  +  +I  +A     R      + QM+K  L PD+ T+           
Sbjct: 75  VFNHVPHPNVHLYNSIIRAHAHNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPS 134

Query: 358 XXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGS--LNRAWSVFNEMESKDLVSWNAM 531
                + +H  + K        V N+LID Y +CG+  L+ A S+F  ME +D+V+WN+M
Sbjct: 135 SLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSM 194

Query: 532 IHGLAIHGHGQKALHLFNRM 591
           I GL   G  Q A  LF+ M
Sbjct: 195 IGGLVRCGELQGACKLFDEM 214


>gb|ESW11550.1| hypothetical protein PHAVU_008G039700g [Phaseolus vulgaris]
          Length = 604

 Score =  229 bits (585), Expect = 3e-58
 Identities = 111/202 (54%), Positives = 144/202 (71%), Gaps = 1/202 (0%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMP++D VSWNT+LDGY K+G+M  AF+LFEK+P R++VSWST++ GY+K GD++MA++
Sbjct: 212 DEMPERDMVSWNTMLDGYTKAGEMDKAFDLFEKIPERNIVSWSTMVCGYSKAGDIDMARM 271

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           LFD  P KN+V WT +I+GYAEKG AREA  LYG+ME+  L+PDDG              
Sbjct: 272 LFDKCPGKNVVLWTTIIAGYAEKGNAREATELYGKMEEAGLRPDDGFLFSILAACAKSGM 331

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFN-EMESKDLVSWNAMIH 537
               ++VH S+ K R +C T V NA IDMY KCG L+ A  VF+  M  KD+VSWN+MI 
Sbjct: 332 LELGRRVHASVKKLRFRCGTKVLNAFIDMYAKCGCLDAASDVFSGMMAKKDVVSWNSMIQ 391

Query: 538 GLAIHGHGQKALHLFNRMKREG 603
             A+HGHG+KAL LF+RM  EG
Sbjct: 392 AFAMHGHGKKALELFSRMVDEG 413



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
 Frame = +1

Query: 34  NTILDGYVKSGD--MVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKN 207
           N+++D Y + G   +  A  LF  M  RDVV+W+++I G  + G++E A+ LFD MP ++
Sbjct: 159 NSLIDSYSRCGSSGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELERARKLFDEMPERD 218

Query: 208 LVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHR 387
           +V+W  M+ GY + G   +A  L+ ++                                 
Sbjct: 219 MVSWNTMLDGYTKAGEMDKAFDLFEKI--------------------------------- 245

Query: 388 SITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHGLAIHGHGQK 567
                 P+   V  + ++  Y K G ++ A  +F++   K++V W  +I G A  G+ ++
Sbjct: 246 ------PERNIVSWSTMVCGYSKAGDIDMARMLFDKCPGKNVVLWTTIIAGYAEKGNARE 299

Query: 568 ALHLFNRMKREG 603
           A  L+ +M+  G
Sbjct: 300 ATELYGKMEEAG 311



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
 Frame = +1

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREA-IGLYGQMEKTKLQPDDGTFVXXXXXXXXXX 357
           +F+ +P  N+  +  +I  +A            + QM K+ L PD+ T+           
Sbjct: 75  VFNQLPHPNVHLYNSIIRAHAHNHSHPSLPFNTFLQMLKSGLFPDNFTYPSLLKACTDSS 134

Query: 358 XXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGS--LNRAWSVFNEMESKDLVSWNAM 531
                + +H  + K        V N+LID Y +CGS  L+ A S+F  ME +D+V+WN+M
Sbjct: 135 SLPLVRMIHAHVEKFGLYADIFVPNSLIDSYSRCGSSGLDGAMSLFLAMEERDVVTWNSM 194

Query: 532 IHGLAIHGHGQKALHLFNRM 591
           I GL   G  ++A  LF+ M
Sbjct: 195 IGGLVRCGELERARKLFDEM 214


>ref|XP_006395295.1| hypothetical protein EUTSA_v10003866mg [Eutrema salsugineum]
           gi|557091934|gb|ESQ32581.1| hypothetical protein
           EUTSA_v10003866mg [Eutrema salsugineum]
          Length = 598

 Score =  226 bits (575), Expect = 5e-57
 Identities = 106/201 (52%), Positives = 137/201 (68%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMP +D +SWNT+LDGY +  DM  AF+LFE+MP R+ VSWST++ GY+K GD+EMA++
Sbjct: 209 DEMPHRDLISWNTMLDGYARCRDMTRAFQLFEQMPERNTVSWSTMVMGYSKAGDMEMARI 268

Query: 181 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXX 360
           +FD MP KN+VTWTI+I+GYAEKGL +EA  L  QM    L+ D    +           
Sbjct: 269 MFDKMPAKNVVTWTIIIAGYAEKGLVKEADRLVDQMVNAGLKFDAAAAISILAACAESGL 328

Query: 361 XXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHG 540
                +VH +I +S       V NAL+DMY KCG L RA+ VFN M  KDLVSWN M+ G
Sbjct: 329 LSLGMRVHSTIKRSNLGSNAYVLNALLDMYAKCGCLERAFDVFNNMPKKDLVSWNTMLQG 388

Query: 541 LAIHGHGQKALHLFNRMKREG 603
           L +HGHG+KA+ LF+RM+REG
Sbjct: 389 LGVHGHGKKAIELFSRMRREG 409



 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 2/192 (1%)
 Frame = +1

Query: 34  NTILDGYVKSGDM--VSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKN 207
           N ++D Y + G M   +A +LF KM  RD VSW++++ G  K G++  A+ LFD MP ++
Sbjct: 156 NALIDCYSRCGAMGVKAAMKLFVKMGERDTVSWNSMLGGLVKAGELRDARQLFDEMPHRD 215

Query: 208 LVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHR 387
           L++W  M+ GYA       A  L+ QM                                 
Sbjct: 216 LISWNTMLDGYARCRDMTRAFQLFEQM--------------------------------- 242

Query: 388 SITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMIHGLAIHGHGQK 567
                 P+  TV  + ++  Y K G +  A  +F++M +K++V+W  +I G A  G  ++
Sbjct: 243 ------PERNTVSWSTMVMGYSKAGDMEMARIMFDKMPAKNVVTWTIIIAGYAEKGLVKE 296

Query: 568 ALHLFNRMKREG 603
           A  L ++M   G
Sbjct: 297 ADRLVDQMVNAG 308



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
 Frame = +1

Query: 169 MAKVLFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXX 348
           +A  +F+ +   N+     +I  +A+     +A  ++ +M++  L  D+ T+        
Sbjct: 69  LAVGVFNQVQQPNVHLCNSLIRAHAQNSQPYQAFSVFSEMQRIGLFADNFTYPFLLKACS 128

Query: 349 XXXXXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLN--RAWSVFNEMESKDLVSW 522
                   K +H  I K        V NALID Y +CG++    A  +F +M  +D VSW
Sbjct: 129 GQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGAMGVKAAMKLFVKMGERDTVSW 188

Query: 523 NAMIHGLAIHGHGQKALHLFNRM 591
           N+M+ GL   G  + A  LF+ M
Sbjct: 189 NSMLGGLVKAGELRDARQLFDEM 211


>ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321335|gb|EFH51756.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 629

 Score =  224 bits (570), Expect = 2e-56
 Identities = 108/203 (53%), Positives = 140/203 (68%), Gaps = 2/203 (0%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMPQ+D +SWNT+LDGY +  +M  AFELFEKMP R+ VSWST++ GY+K GD+EMA+V
Sbjct: 209 DEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARV 268

Query: 181 LFDNM--PVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXX 354
           +FD M  P KN+VTWTI+I+GYAEKGL +EA  L  QM  + L+ D    +         
Sbjct: 269 MFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAES 328

Query: 355 XXXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMI 534
                  + H  I KS       V NAL+DMY KCGSL +A+ VFN+M  KDLVSWN M+
Sbjct: 329 GLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMPKKDLVSWNTML 388

Query: 535 HGLAIHGHGQKALHLFNRMKREG 603
           HGL +HGHG++A+ LF+RM++EG
Sbjct: 389 HGLGVHGHGKEAIELFSRMRKEG 411



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
 Frame = +1

Query: 34  NTILDGYVKSGDMV--SAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKN 207
           N ++D Y + G +    A +LFEKM  RD VSW++++ G  K G++  A+ LFD MP ++
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMPQRD 215

Query: 208 LVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHR 387
           L++W  M+ GYA       A  L+ +M                                 
Sbjct: 216 LISWNTMLDGYARCREMSRAFELFEKM--------------------------------- 242

Query: 388 SITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEM--ESKDLVSWNAMIHGLAIHGHG 561
                 P+  TV  + ++  Y K G +  A  +F++M   +K++V+W  +I G A  G  
Sbjct: 243 ------PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLL 296

Query: 562 QKALHLFNRMKREG 603
           ++A  L ++M   G
Sbjct: 297 KEADKLVDQMVASG 310



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 2/143 (1%)
 Frame = +1

Query: 169 MAKVLFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXX 348
           +A  +F+ +   N+     +I  +A      +A  ++ +M++  L  D+ T+        
Sbjct: 69  LALRVFNQVQEPNVHLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS 128

Query: 349 XXXXXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLN--RAWSVFNEMESKDLVSW 522
                   K +H  I K        V NALID Y +CG L    A  +F +M  +D VSW
Sbjct: 129 GLSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSW 188

Query: 523 NAMIHGLAIHGHGQKALHLFNRM 591
           N+M+ GL   G  + A  LF+ M
Sbjct: 189 NSMLGGLVKAGELRDARKLFDEM 211



 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 8/144 (5%)
 Frame = +1

Query: 145 YAKTGDVEMAKVLFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTF 324
           YAK G ++ A  +F++MP K+LV+W  M+ G    G  +EAI L+ +M K  + PD  TF
Sbjct: 360 YAKCGSLKKAFDVFNDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTF 419

Query: 325 V-------XXXXXXXXXXXXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWS 483
           +                      +KV+  + K     C      L+D+  + G L  A  
Sbjct: 420 IAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPKVEHYGC------LVDLLGRGGRLKEAIK 473

Query: 484 VFNEMESK-DLVSWNAMIHGLAIH 552
           V   M  + ++V W A++    +H
Sbjct: 474 VVQTMPMEPNVVIWGALLGACRMH 497


>ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g29230 gi|9293916|dbj|BAB01819.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332644032|gb|AEE77553.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 600

 Score =  222 bits (566), Expect = 5e-56
 Identities = 105/203 (51%), Positives = 142/203 (69%), Gaps = 2/203 (0%)
 Frame = +1

Query: 1   DEMPQKDRVSWNTILDGYVKSGDMVSAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 180
           DEMPQ+D +SWNT+LDGY +  +M  AFELFEKMP R+ VSWST++ GY+K GD+EMA+V
Sbjct: 209 DEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARV 268

Query: 181 LFDNMPV--KNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXX 354
           +FD MP+  KN+VTWTI+I+GYAEKGL +EA  L  QM  + L+ D    +         
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328

Query: 355 XXXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEMESKDLVSWNAMI 534
                  ++H  + +S       V NAL+DMY KCG+L +A+ VFN++  KDLVSWN M+
Sbjct: 329 GLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTML 388

Query: 535 HGLAIHGHGQKALHLFNRMKREG 603
           HGL +HGHG++A+ LF+RM+REG
Sbjct: 389 HGLGVHGHGKEAIELFSRMRREG 411



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 4/194 (2%)
 Frame = +1

Query: 34  NTILDGYVKSGDMV--SAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKN 207
           N ++D Y + G +    A +LFEKM  RD VSW++++ G  K G++  A+ LFD MP ++
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215

Query: 208 LVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXXXXXXXXXXKKVHR 387
           L++W  M+ GYA      +A  L+ +M                                 
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKM--------------------------------- 242

Query: 388 SITKSRPKCCTVVSNALIDMYCKCGSLNRAWSVFNEM--ESKDLVSWNAMIHGLAIHGHG 561
                 P+  TV  + ++  Y K G +  A  +F++M   +K++V+W  +I G A  G  
Sbjct: 243 ------PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLL 296

Query: 562 QKALHLFNRMKREG 603
           ++A  L ++M   G
Sbjct: 297 KEADRLVDQMVASG 310



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 2/143 (1%)
 Frame = +1

Query: 169 MAKVLFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQPDDGTFVXXXXXXX 348
           +A  +F+ +   N+     +I  +A+     +A  ++ +M++  L  D+ T+        
Sbjct: 69  LAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS 128

Query: 349 XXXXXXXXKKVHRSITKSRPKCCTVVSNALIDMYCKCGSLN--RAWSVFNEMESKDLVSW 522
                   K +H  I K        V NALID Y +CG L    A  +F +M  +D VSW
Sbjct: 129 GQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSW 188

Query: 523 NAMIHGLAIHGHGQKALHLFNRM 591
           N+M+ GL   G  + A  LF+ M
Sbjct: 189 NSMLGGLVKAGELRDARRLFDEM 211