BLASTX nr result
ID: Rehmannia23_contig00028720
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00028720
(1096 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAF64710.1| putative transposase [Ipomoea tricolor] 76 5e-19
gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1... 60 5e-11
ref|XP_003626023.1| Replication factor A protein [Medicago trunc... 56 3e-09
gb|ESW21756.1| hypothetical protein PHAVU_005G096800g [Phaseolus... 52 3e-08
ref|XP_003605520.1| Replication protein A1-like protein [Medicag... 56 1e-07
ref|XP_003605543.1| Replication protein A1-like protein [Medicag... 56 1e-07
ref|XP_003605522.1| Replication protein A1-like protein [Medicag... 55 2e-07
gb|ESW33865.1| hypothetical protein PHAVU_001G105000g [Phaseolus... 46 1e-06
ref|XP_003629182.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 54 2e-06
>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
Length = 517
Score = 76.3 bits (186), Expect(2) = 5e-19
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Frame = +3
Query: 6 FWVYAKIVAVETDCDWWYISCTK--CPRKMTKIIGELYCENCDNYDAVGQIRYNNIKYTN 179
FWV AKIV +E+ DW+Y+SC C +K+T + LY +CD
Sbjct: 293 FWVAAKIVGIESSWDWFYVSCKSHGCNKKLT-LRNTLY--DCDK---------------- 333
Query: 180 IF*ILTLCEYNDLKNNSRYKIKIRVVDITGNAALLLWDRECKELIGKSAFDLRMR 344
C+ + RY++K+R VD+ GNA +LWD+EC EL+G SA DLR +
Sbjct: 334 -------CKRTWQEGILRYRVKVRAVDLDGNAPFILWDKECTELLGISATDLRQK 381
Score = 45.8 bits (107), Expect(2) = 5e-19
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = +1
Query: 451 VPDEIRDLVDMKVLFKVQVRSGQIGVKNVVYTVVKCTLDDALISKFCPQTLENQESDIFS 630
+P EI LV + +LF++ VR Q + + V+K D L+S +CP+ L+ + D+ S
Sbjct: 389 IPREIESLVGLAMLFRIAVRKEQFDNLHNAFAVMKVMNDPKLVSVYCPELLDKPDKDLTS 448
Query: 631 KLKSKDLEDGEE 666
++ D +E
Sbjct: 449 EVHPLDYGFSDE 460
>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein
[Beta vulgaris subsp. vulgaris]
Length = 2037
Score = 60.1 bits (144), Expect(2) = 5e-11
Identities = 39/120 (32%), Positives = 66/120 (55%)
Frame = +3
Query: 18 AKIVAVETDCDWWYISCTKCPRKMTKIIGELYCENCDNYDAVGQIRYNNIKYTNIF*ILT 197
A IV V+ + W+Y++C KC +K+ + GE+ E + G + I + +
Sbjct: 252 ATIVCVQFEYGWFYLACKKCNKKVV-VEGEIKTECDGDQSDNGTTKLLIIPFGVDIVVNK 310
Query: 198 LCEYNDLKNNSRYKIKIRVVDITGNAALLLWDRECKELIGKSAFDLRMRSDEKVQLTNIL 377
+C + R+KI++RVVD +G+A+ +++DRE K ++ KSA SD V LTNI+
Sbjct: 311 IC----INIVDRFKIQVRVVDGSGSASFVMFDREVKSIVHKSA------SDVNVSLTNII 360
Score = 35.0 bits (79), Expect(2) = 5e-11
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +1
Query: 454 PDEIRDLVDMKVLFKVQVRSGQIGVKNVVYTVVKCTLDDALISKFCPQTLENQ 612
P+E+ LV+ + LFKV+V + VYTVVK T ++ +I F + +Q
Sbjct: 366 PEELNALVNRRFLFKVEVSEYNLTQNWPVYTVVKMTDNENIIESFLNSSTGDQ 418
>ref|XP_003626023.1| Replication factor A protein [Medicago truncatula]
gi|355501038|gb|AES82241.1| Replication factor A protein
[Medicago truncatula]
Length = 526
Score = 55.8 bits (133), Expect(2) = 3e-09
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Frame = +3
Query: 12 VYAKIVAVETDCDWWYISCTKCPRKMTKIIGELYCENCDNYDAVGQIRYNNIKYTNIF*I 191
V A I+ +E + W+Y +CTKC ++ I G ++C C
Sbjct: 291 VLASIIGIEAEYSWYYDACTKCAGRIKIIAGRMFCPRC---------------------- 328
Query: 192 LTLCEYNDLKNN-SRYKIKIRVVDITGNAALLLWDRECKELIGKSAFDL 335
N +N R+K+ ++V+D TG+ + +L+DR +GKS DL
Sbjct: 329 ------NQSRNAVPRFKLHVQVMDNTGSTSFILFDRNVSNYVGKSVQDL 371
Score = 33.1 bits (74), Expect(2) = 3e-09
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 448 GVPDEIRDLVDMKVLFKVQVRSGQIGVKNVVYTVVKCTLDDALISKF 588
G P ++ LV K+LFKV++ G + + Y V + T D LIS+F
Sbjct: 383 GYPSDLDVLVGKKMLFKVEITDGNLHLSWRNYGVKRTTDDPDLISQF 429
>gb|ESW21756.1| hypothetical protein PHAVU_005G096800g [Phaseolus vulgaris]
Length = 457
Score = 52.0 bits (123), Expect(2) = 3e-08
Identities = 32/119 (26%), Positives = 51/119 (42%)
Frame = +3
Query: 3 SFWVYAKIVAVETDCDWWYISCTKCPRKMTKIIGELYCENCDNYDAVGQIRYNNIKYTNI 182
+F + A I + D DWWY +C C + + +CE C+ +
Sbjct: 238 TFVILATIKHIVADDDWWYTTCL-CGKAVYPDSKMFFCEKCNKHV--------------- 281
Query: 183 F*ILTLCEYNDLKNNSRYKIKIRVVDITGNAALLLWDRECKELIGKSAFDLRMRSDEKV 359
+K RYK+K+RV+D T + +L+DR+ LI KS +L D+ V
Sbjct: 282 -----------IKVQQRYKLKLRVIDETNSTTFVLFDRDATTLINKSCAELFESHDKNV 329
Score = 33.9 bits (76), Expect(2) = 3e-08
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Frame = +1
Query: 451 VPDEIRDLVDMKVLFKVQVRSGQIGVKNVVYTVVKCTLDDALISKFCPQTLENQESDIFS 630
+P + L+D VLFKV Q + + V K +DD+ I +FC +EN D+F+
Sbjct: 334 LPKDFDLLIDKVVLFKVGCVKYQYLRFDQSFRVKKVCIDDSTIQRFCEGRVEN--VDLFN 391
Query: 631 K-------LKSKDLEDGEE 666
K L+SK ++ G +
Sbjct: 392 KFSTEAADLQSKTIDLGSD 410
>ref|XP_003605520.1| Replication protein A1-like protein [Medicago truncatula]
gi|355506575|gb|AES87717.1| Replication protein A1-like
protein [Medicago truncatula]
Length = 596
Score = 55.8 bits (133), Expect(2) = 1e-07
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +3
Query: 12 VYAKIVAVETDCDWWYISCTKCPRKMTKIIGELYCENC-DNYDAVGQIRYNNIKYTNIF* 188
V+A I +E + W+Y +CTKC ++T + G ++C C + +AV
Sbjct: 345 VFASICGIEPEYGWYYDACTKCAGRITIVAGRMFCPRCKQSRNAV--------------- 389
Query: 189 ILTLCEYNDLKNNSRYKIKIRVVDITGNAALLLWDRECKELIGKSAFDL 335
R+K+ ++V+D TG+ + +L+DR +G+S DL
Sbjct: 390 -------------PRFKLHVQVMDTTGSTSFILFDRNVSNYVGRSVQDL 425
Score = 27.7 bits (60), Expect(2) = 1e-07
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 448 GVPDEIRDLVDMKVLFKVQVRSGQIGVKNVVYTVVKCTLDDA-LISKF 588
G P ++ LV K+LFKV + +G + + N VK T DDA LI F
Sbjct: 437 GYPADLEVLVGKKMLFKVDITNGNL-LHNWRNYGVKRTSDDAELIQMF 483
>ref|XP_003605543.1| Replication protein A1-like protein [Medicago truncatula]
gi|355506598|gb|AES87740.1| Replication protein A1-like
protein [Medicago truncatula]
Length = 378
Score = 55.8 bits (133), Expect(2) = 1e-07
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +3
Query: 12 VYAKIVAVETDCDWWYISCTKCPRKMTKIIGELYCENC-DNYDAVGQIRYNNIKYTNIF* 188
V+A I +E + W+Y +CTKC ++T + G ++C C + +AV
Sbjct: 127 VFASICGIEPEYGWYYDACTKCAGRITIVAGRMFCPRCKQSRNAV--------------- 171
Query: 189 ILTLCEYNDLKNNSRYKIKIRVVDITGNAALLLWDRECKELIGKSAFDL 335
R+K+ ++V+D TG+ + +L+DR +G+S DL
Sbjct: 172 -------------PRFKLHVQVMDTTGSTSFILFDRNVSNYVGRSVQDL 207
Score = 27.7 bits (60), Expect(2) = 1e-07
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 448 GVPDEIRDLVDMKVLFKVQVRSGQIGVKNVVYTVVKCTLDDA-LISKF 588
G P ++ LV K+LFKV + +G + + N VK T DDA LI F
Sbjct: 219 GYPADLEVLVGKKMLFKVDITNGNL-LHNWRNYGVKRTSDDAELIQMF 265
>ref|XP_003605522.1| Replication protein A1-like protein [Medicago truncatula]
gi|355506577|gb|AES87719.1| Replication protein A1-like
protein [Medicago truncatula]
Length = 596
Score = 55.5 bits (132), Expect(2) = 2e-07
Identities = 28/108 (25%), Positives = 49/108 (45%)
Frame = +3
Query: 12 VYAKIVAVETDCDWWYISCTKCPRKMTKIIGELYCENCDNYDAVGQIRYNNIKYTNIF*I 191
V+A I +E + W+Y +CTKC ++T + G ++C C V
Sbjct: 345 VFASICGIEPEYGWYYDACTKCAGRITIVAGRMFCPRCKQSRNV---------------- 388
Query: 192 LTLCEYNDLKNNSRYKIKIRVVDITGNAALLLWDRECKELIGKSAFDL 335
R+K+ ++V+D TG+ + +L+DR +G+S DL
Sbjct: 389 -----------VPRFKLHVQVMDTTGSTSFILFDRNVSNYVGRSVQDL 425
Score = 27.7 bits (60), Expect(2) = 2e-07
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 448 GVPDEIRDLVDMKVLFKVQVRSGQIGVKNVVYTVVKCTLDDA-LISKF 588
G P ++ LV K+LFKV + +G + + N VK T DDA LI F
Sbjct: 437 GYPADLEVLVGKKMLFKVDITNGNL-LHNWRNYGVKRTSDDAELIQMF 483
>gb|ESW33865.1| hypothetical protein PHAVU_001G105000g [Phaseolus vulgaris]
Length = 405
Score = 45.8 bits (107), Expect(2) = 1e-06
Identities = 30/112 (26%), Positives = 48/112 (42%)
Frame = +3
Query: 48 DWWYISCTKCPRKMTKIIGELYCENCDNYDAVGQIRYNNIKYTNIF*ILTLCEYNDLKNN 227
DWWY +C C + + +CE C+ + +K
Sbjct: 203 DWWYTACL-CGKVVYPDSKMFFCEKCNKHV--------------------------IKVQ 235
Query: 228 SRYKIKIRVVDITGNAALLLWDRECKELIGKSAFDLRMRSDEKVQLTNILAK 383
RYK+K+RV+D T + +L+DR+ LI KS +L S +K + +L K
Sbjct: 236 QRYKLKVRVIDKTDSTTFILFDRDATTLINKSCAEL-FESHDKNGDSGVLPK 286
Score = 34.7 bits (78), Expect(2) = 1e-06
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +1
Query: 451 VPDEIRDLVDMKVLFKVQVRSGQIGVKNVVYTVVKCTLDDALISKFCPQTLENQESDIFS 630
+P E L+D VLFKV Q + + V K +DD I +FC +EN D+F+
Sbjct: 284 LPKEFDLLIDKVVLFKVGCVKDQSLRFDQSFRVKKVCIDDTTIQRFCDGRVEN--VDLFN 341
Query: 631 KLKSK 645
K ++
Sbjct: 342 KFSNE 346
>ref|XP_003629182.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355523204|gb|AET03658.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 604
Score = 54.3 bits (129), Expect(2) = 2e-06
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Frame = +3
Query: 12 VYAKIVAVETDCDWWYISCTKCPRKMTKIIGELYCENCD-NYDAVGQIRYNNIKYTNIF* 188
V A + +E + +W+Y +CTKC ++ I G L+C C+ +AV
Sbjct: 291 VLATVCDIEKEFNWYYQACTKCAGRVKTIAGRLFCPKCNTGRNAV--------------- 335
Query: 189 ILTLCEYNDLKNNSRYKIKIRVVDITGNAALLLWDRECKELIGKSAFDLRMRSDEKVQLT 368
R+K+ ++V+D TG+ + +L+DR +GKS DL + ++
Sbjct: 336 -------------PRFKVHLQVMDNTGSTSFILFDRNVSNYVGKSVQDLIQQQAQQKNAD 382
Query: 369 NILAKHNNKY 398
+ A+ + Y
Sbjct: 383 DFPAEFDTFY 392
Score = 25.0 bits (53), Expect(2) = 2e-06
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 454 PDEIRDLVDMKVLFKVQVRSGQIGVKNVVYTVVKCTLDDALISKF 588
P E ++LFKV+V G I Y+V + T D +I +F
Sbjct: 385 PAEFDTFYGKQMLFKVEVAEGNIVHNWRSYSVKQVTADLDMIKRF 429