BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00028665
         (666 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...    98   3e-18
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...    95   2e-17
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...    95   2e-17
ref|XP_006428778.1| hypothetical protein CICLE_v10013872mg, part...    89   2e-15
ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623...    88   2e-15
ref|XP_006471930.1| PREDICTED: uncharacterized protein LOC102617...    88   2e-15
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622...    87   5e-15
ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608...    86   1e-14
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617...    86   1e-14
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...    82   2e-13
ref|XP_006473914.1| PREDICTED: uncharacterized protein LOC102629...    82   2e-13
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621...    81   2e-13
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A...    80   4e-13
gb|ABA96203.1| retrotransposon protein, putative, unclassified, ...    75   2e-11
gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japo...    75   2e-11
gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indi...    75   2e-11
gb|EXB89969.1| hypothetical protein L484_023622 [Morus notabilis]      72   2e-10
ref|XP_006450894.1| hypothetical protein CICLE_v10010478mg, part...    72   2e-10
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    72   2e-10
ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein A...    71   3e-10

>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 769

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 2/217 (0%)
 Frame = +2

Query: 2    LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKKAQAGDI 181
            L+ T  NL +  +     C  C    +T  HSLF C+  R+IWK + F + +K  +  D+
Sbjct: 473  LLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKCKDV 532

Query: 182  IDVAVWMKERLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADFLSAF-RIA 358
            + + + + +R  K   E      W++W  +  F+  N K+     V+ A   + ++ RI 
Sbjct: 533  LSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAIVQSYKRIQ 592

Query: 359  QKQTSFVGNKESKIEVQWSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFGTK 538
              Q     N++      W  P   + +++VDA    +  R   G  IRNSEG+ +    K
Sbjct: 593  MPQLQAFSNQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIRNSEGKFITAAIK 652

Query: 539  -YEHLDCVLDDELRAIRDGLIRARDAGIDLVIVYSDS 646
              + LD V   E  A R GL  A  AG   +IV +DS
Sbjct: 653  PSKWLDRVDYAEAEATRFGLEVAESAGCLPLIVETDS 689


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
            [Citrus sinensis]
          Length = 765

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 2/217 (0%)
 Frame = +2

Query: 2    LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKKAQAGDI 181
            L+ T  NL +  +     C  C    +T  HSLF C+  R+IWK + F + +K  +  D+
Sbjct: 473  LLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKCKDV 532

Query: 182  IDVAVWMKERLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADFLSAF-RIA 358
            + + + + +R  K   E      W++W  +  F+  N K+     V+ A   + ++ RI 
Sbjct: 533  LSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAIVQSYKRIQ 592

Query: 359  QKQTSFVGNKESKIEVQWSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFGTK 538
              Q     +++      W  P   + +++VDA    +  R   G  IRNSEG+ +    K
Sbjct: 593  MPQLQAFSDQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIRNSEGKFITAAIK 652

Query: 539  -YEHLDCVLDDELRAIRDGLIRARDAGIDLVIVYSDS 646
              + +D V   E  A R GL  A  AG   +IV +DS
Sbjct: 653  PSKWIDRVDYAEAEATRFGLEVAESAGCLPLIVETDS 689


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 2/217 (0%)
 Frame = +2

Query: 2    LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKKAQAGDI 181
            L+ T  NL +  +     C  C    +T  HSLF C+  R+IWK + F + +K  +  D+
Sbjct: 676  LLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKCKDV 735

Query: 182  IDVAVWMKERLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADFLSAF-RIA 358
            + + + + +R  K   E      W++W  +  F+  N K+     V+ A   + ++ RI 
Sbjct: 736  LSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAIVQSYKRIQ 795

Query: 359  QKQTSFVGNKESKIEVQWSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFGTK 538
              Q     +++      W  P   + +++VDA    +  R   G  IRNSEG+ +    K
Sbjct: 796  MPQLQAFSDQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIRNSEGKFITAAIK 855

Query: 539  -YEHLDCVLDDELRAIRDGLIRARDAGIDLVIVYSDS 646
              + +D V   E  A R GL  A  AG   +IV +DS
Sbjct: 856  PSKWIDRVDYAEAEATRFGLEVAESAGCLPLIVETDS 892


>ref|XP_006428778.1| hypothetical protein CICLE_v10013872mg, partial [Citrus clementina]
           gi|557530835|gb|ESR42018.1| hypothetical protein
           CICLE_v10013872mg, partial [Citrus clementina]
          Length = 305

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 2/221 (0%)
 Frame = +2

Query: 2   LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKKAQAGDI 181
           ++ T +NL+   +P    C  C +D D T H+L  C+ V+++WK + F   L      + 
Sbjct: 23  ILPTNLNLHNKKLPVAPTCPCCGFDYDDTYHALVGCKQVKKVWKLTRFSSSLNSTMPMEF 82

Query: 182 IDVAVWMKERLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADFLSAFRIAQ 361
            ++++ +   L K  FE +  +  ++W  +    HGN  ++    V+ A + L++ R   
Sbjct: 83  SNISIHIASLLTKDVFEEWVVFCCSIWLARNYLTHGNAIRESQDAVTQAENVLASLRAGT 142

Query: 362 KQTSF-VGNKESKIEVQWSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFG-T 535
            Q      +K +K    W      + ++++DA   +K +    G  +RNS G+V+    +
Sbjct: 143 TQGQVDRSSKTNKPRQTWQSLPEPWYKVNIDAIVRSKADHAGIGVLVRNSVGDVMTASIS 202

Query: 536 KYEHLDCVLDDELRAIRDGLIRARDAGIDLVIVYSDSLMAV 658
           +   L  V   E  A++ GL    D G+   I+ SDSL  V
Sbjct: 203 QALFLGDVEFVEALALQKGLRLTSDIGLTPAIIKSDSLNVV 243


>ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623801 [Citrus sinensis]
          Length = 441

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 2/217 (0%)
 Frame = +2

Query: 2   LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKKAQAGDI 181
           L+ T  NL R  +     C  C   N+   H+L  C+  +++W+ +   + ++K    D+
Sbjct: 145 LLPTTSNLWRRKIVGSPICRRCGVKNEDVIHALLDCKVAKKVWRNAGCAEEIEKLVQQDL 204

Query: 182 IDVAVWMKERLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADFLSAFRIAQ 361
           + V V ++ +  K   E      W +W  +  F+  N ++     ++ A   L +FR  +
Sbjct: 205 MAVLVEIQRKKGKKELELIVVLCWTIWYSRNLFIFENKREDSQLSIARAEANLDSFRRIK 264

Query: 362 KQTSFVGNKESKIEVQ-WSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFGTK 538
           K +S +  K+ +   Q W+ P   + +++VDA  N K+     G  IRNS GEVV    +
Sbjct: 265 KPSSKILEKQQRNRKQVWNPPPCGWFKINVDAAVNVKDQIAGLGVIIRNSNGEVVAAAIQ 324

Query: 539 YEHLDCVLDD-ELRAIRDGLIRARDAGIDLVIVYSDS 646
                      E  A+  G+  A+ AG   +I+ +DS
Sbjct: 325 RSFFQLSSTHMEAEAVILGIKSAQRAGFSPMIIETDS 361


>ref|XP_006471930.1| PREDICTED: uncharacterized protein LOC102617744 [Citrus sinensis]
          Length = 294

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 2/198 (1%)
 Frame = +2

Query: 56  CALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKKAQAGDIIDVAVWMKERLEKVNFEA 235
           C  CH   +T +H+LF C+  R+ W  +     L+     DI   A  +     +   E 
Sbjct: 17  CPRCHKSVETISHALFECKAARKTWNLAPSTFELQNVPGQDIFSYAQNLCSNSRRNEAEL 76

Query: 236 FACYTWAVWKEKQTFVHGNGKKKMATEVSWAADFLSAF-RIAQKQTSFVGNKESKIEVQW 412
              Y WA+W  +   +    K +     + A   L A+ R+ +  T  + N   + + +W
Sbjct: 77  MIMYCWAIWFARNKLIFERKKIEPIVSAAKAESMLEAYQRVRKTGTLHISNTREESQQRW 136

Query: 413 SKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFGTKYEHL-DCVLDDELRAIRD 589
           S P TN  +L+VDA  N+K+ +   G  +R+S G VV  G K       V   E  AI+ 
Sbjct: 137 SPPPTNVLKLNVDAATNSKDQKVGLGAVLRDSNGRVVAAGIKQASFRKDVSFAEAEAIQW 196

Query: 590 GLIRARDAGIDLVIVYSD 643
           GL  A+ A    +IV +D
Sbjct: 197 GLQIAKKAAAASLIVETD 214


>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
          Length = 1160

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 2/217 (0%)
 Frame = +2

Query: 2    LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKKAQAGDI 181
            L+ +  NL +  +  E  C LC    +   H+L  C+  +++W+ S F+  ++ A   DI
Sbjct: 832  LLPSAENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRLSLFYIDIQAAPGQDI 891

Query: 182  IDVAVWMKERLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADFLSAFRIAQ 361
            + +   +K      + + FA   WA W  +  ++    ++   + V+ A   + A++  Q
Sbjct: 892  LSLLHGVKRMRSNADVDLFAVMLWAKWNARNQWLFKGKRENPQSVVAKAEAVMEAYKRVQ 951

Query: 362  KQTSFVGNKESKI-EVQWSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFGTK 538
                    K+ K+ ++ W+ P   + +++ DA  N+++N    G  IR+  G+V     K
Sbjct: 952  PSADVSHGKQQKVAQLGWNPPQEGFVKINTDAATNSEKNLAGLGAVIRDENGQVTATAIK 1011

Query: 539  YEHL-DCVLDDELRAIRDGLIRARDAGIDLVIVYSDS 646
                   V   E  A+  GL  A+DA +  VI+ SDS
Sbjct: 1012 VSKFHGSVAYAEAEAMEWGLQVAKDAHVKDVIMESDS 1048


>ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608298 [Citrus sinensis]
          Length = 1570

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 3/223 (1%)
 Frame = +2

Query: 2    LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKKAQAGDI 181
            L+ +  NL +  V  E  C  C+   +T  H+L  C+ V++IWK + F D LK +   D+
Sbjct: 976  LLPSAENLWKRKVIQEPLCQFCNKKLETIFHALVGCKVVKKIWKITRFEDDLKDSVEQDM 1035

Query: 182  IDVAVWMKERLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADFLSAFRIAQ 361
            + + + +K R  K + E      W +W  + +++    K      VS A   L AFR  Q
Sbjct: 1036 LSLLIELKLRRSKDDIELLVTILWMIWNAQNSWIFKGVKDSPHVTVSKAEAVLEAFRRTQ 1095

Query: 362  --KQTSFVGNKESKIEVQWSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFGT 535
                T       SK++  W  P   + +++VDA  N+++   + G  IR+  G V+    
Sbjct: 1096 LPAATHIDIQSSSKLKA-WKPPQRGHFKVNVDAATNSEKQIASLGAVIRDEAGNVIAAAV 1154

Query: 536  KY-EHLDCVLDDELRAIRDGLIRARDAGIDLVIVYSDSLMAVQ 661
            K  +    V   E  AI  GL  A +A  + +IV SD+   V+
Sbjct: 1155 KVSKFYGDVFIAEAEAIEWGLRLAGNACTESLIVESDAQEVVK 1197


>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
          Length = 1238

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 2/217 (0%)
 Frame = +2

Query: 2    LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKKAQAGDI 181
            L+ T  NL R  +     C  C   N+   H+L  C+  +++W+ +   + ++K    D+
Sbjct: 942  LLPTASNLWRRKIVGSPICRRCGVKNEDVIHALLDCKVAKKVWRNAGCAEEIEKLVQQDL 1001

Query: 182  IDVAVWMKERLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADFLSAFRIAQ 361
            + V V ++ +  K   E      W +W  +  F+  N ++     ++ A   + +F+  +
Sbjct: 1002 MAVLVEIQRKKGKKELELIVVLCWTIWYSQNLFIFENKREDSQLSIARAEANMDSFKRIK 1061

Query: 362  KQTSFVGNKESKIEVQ-WSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFGTK 538
            K  S +  K+ +   Q W+ P + + +++VDA  N K+     G  IRNS GEVV    +
Sbjct: 1062 KPFSKILEKQQRNRKQVWNPPPSGWFKINVDAAVNVKDQIAGLGVIIRNSNGEVVAAAIQ 1121

Query: 539  YEHLDCVLDD-ELRAIRDGLIRARDAGIDLVIVYSDS 646
                       E  A+  G+  A+ AG   +I+ +DS
Sbjct: 1122 RSFFQLSSTHMEAEAVILGIKSAQRAGFSPMIIETDS 1158


>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 3/223 (1%)
 Frame = +2

Query: 2    LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKKAQAGDI 181
            ++ T  NL +     E  C  C    +T +H L  C+  R+IW  +       K    D 
Sbjct: 1156 ILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKDHNQDF 1215

Query: 182  IDVAVWMKERLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAAD-FLSAFRIA 358
                  M  R      E    Y W +W  +  F+   GKK  +  ++  AD  L A++  
Sbjct: 1216 FSAIQEMWSRSSTAEAELMIVYCWVIWSARNKFIF-EGKKSDSRFLAAKADSVLKAYQRV 1274

Query: 359  QKQTSFVGNKESKIEVQ-WSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFGT 535
             K  +  G K+  I+ Q W  P  N  +L+VDA  +TK+ +   G  +R++EG+++  G 
Sbjct: 1275 SKPGNVHGAKDRGIDQQKWKPPSQNVLKLNVDAAVSTKDQKVGLGAIVRDAEGKILAVGI 1334

Query: 536  KY-EHLDCVLDDELRAIRDGLIRARDAGIDLVIVYSDSLMAVQ 661
            K  +  + V   E  AI  GL  A       +IV SD    V+
Sbjct: 1335 KQAQFRERVSLAEAEAIHWGLQVANQISSSSLIVESDCKEVVE 1377


>ref|XP_006473914.1| PREDICTED: uncharacterized protein LOC102629934 [Citrus sinensis]
          Length = 304

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 2/222 (0%)
 Frame = +2

Query: 2   LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKKAQAGDI 181
           L+AT  NL +  V     C  C    +T  H LF C+  ++IW+ + F    +  +  D+
Sbjct: 8   LLATAENLWKRKVVQFPWCQRCKKTRETVCHMLFECKVSKQIWRLTPFVVDSQLGKVRDV 67

Query: 182 IDVAVWMKERLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADFLSAF-RIA 358
             +   +  +  K   E      W++W  +   +  N ++     V+ A   + ++ RI 
Sbjct: 68  FSLLQDLTTKRTKAEMELIVAVCWSIWHSRNLAIFKNKREDSHLSVAAAEALVQSYKRIQ 127

Query: 359 QKQTSFVGNKESKIEVQWSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFGTK 538
             Q S        I+ +WS P   + +++VDA    ++ R   G  IRNSEG+V+    K
Sbjct: 128 MPQMSKSPPTSLAIQQKWSYPPEGWFKVNVDAAVKMEQQRTGLGIVIRNSEGKVMAAAMK 187

Query: 539 -YEHLDCVLDDELRAIRDGLIRARDAGIDLVIVYSDSLMAVQ 661
             + L  V   E  A + GL  A + G   +I+ SDS   V+
Sbjct: 188 PSKFLSKVDAAEAEAAKFGLEIAENVGCFPLIIESDSKEVVE 229


>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
          Length = 2303

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 2/216 (0%)
 Frame = +2

Query: 2    LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKKAQAGDI 181
            L+ T  NL +     +  C  C+ + +T  H+L  C+  R+IW  +     +  AQ  DI
Sbjct: 1039 LLPTAENLWKRKCLKDPICQGCNREVETVRHALLDCKAARKIWYHATSSVQISNAQNQDI 1098

Query: 182  IDVAVWMKERLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADFLSAFRIAQ 361
            ++    +     K   E    + WA+W  +   +    K       + A   L A+  A+
Sbjct: 1099 LEFIYEVWSTWGKTKAEQTIAFCWAIWFARNKRIFEGKKSDPRASAAKAESLLEAYHRAR 1158

Query: 362  K-QTSFVGNKESKIEVQWSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFGTK 538
            K   S + N +  ++ +W  P  N+ +++VDA  N ++     G  I++  G++V  GTK
Sbjct: 1159 KPDASHIHNVKRIVQKKWEPPPGNFLKVNVDAAINNRDQVAGLGAVIKDPSGKIVAAGTK 1218

Query: 539  YEHL-DCVLDDELRAIRDGLIRARDAGIDLVIVYSD 643
               L + V   E  A+  GL  AR+  +  +I+ +D
Sbjct: 1219 QVPLREGVSFAEAEAMEWGLQIARELSLSALIMETD 1254


>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 765

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 3/223 (1%)
 Frame = +2

Query: 2    LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKKAQAGDI 181
            ++ T  NL +     E  C  C    +T +H L  C+  R+IW  +       K    D 
Sbjct: 469  ILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKDHNQDF 528

Query: 182  IDVAVWMKERLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAAD-FLSAFRIA 358
                  M  R      E    Y W +W  +  F+   GKK  +  ++  AD  L A++  
Sbjct: 529  FSAIQEMWSRSSTAEAELMIVYCWVIWSARNKFIF-EGKKSDSRFLAAKADSVLKAYQRV 587

Query: 359  QKQTSFVGNKESKIEVQ-WSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFGT 535
             K  +  G K+  I+ Q W  P  N  +L+VDA  +TK  +   G  +R++EG+++  G 
Sbjct: 588  SKPGNVHGAKDRGIDQQKWKPPSQNVLKLNVDAAVSTKXQKVGLGAIVRDAEGKILAVGI 647

Query: 536  KY-EHLDCVLDDELRAIRDGLIRARDAGIDLVIVYSDSLMAVQ 661
            K  +  + V   E  AI  GL  A       +IV SD    V+
Sbjct: 648  KQAQFRERVSLAEAEAIHWGLQVANQISSSSLIVESDCKEVVE 690


>gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1378

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 9/229 (3%)
 Frame = +2

Query: 2    LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKK----AQ 169
            L+  +  L   HV   GGC +C    +   H +F C   +++W      D +++     +
Sbjct: 530  LVPCRAILANRHVGDSGGCPVCQNGPEDIKHMIFTCARAKQVWNSLGVEDRIQRLCMTER 589

Query: 170  AGDIIDVAVWMKE----RLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADF 337
            +G +I   + ++E     L+    E      W +W E++  VHG   ++ A      A  
Sbjct: 590  SGSVILEEILIREDQVQDLQVGFAELVITAAWYIWWERRQLVHGEAVQRPARSGMAIAAL 649

Query: 338  LSAFRIAQKQTSFVGNKESKIEVQWSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGE 517
               +++A K       K+S +   W KP      ++VDA ++        G  IR+  G 
Sbjct: 650  TKNYKLATK-------KDSVLRQGWKKPPEGKVMVNVDAGFDEMGGCGTVGSVIRDCSGG 702

Query: 518  VVGFGTKY-EHLDCVLDDELRAIRDGLIRARDAGIDLVIVYSDSLMAVQ 661
            V+     +  HL      E  A+++GL+ A+  G + +I+ SD +  VQ
Sbjct: 703  VLAAAHSFVPHLVDAPMAEAFALKEGLMLAQQIGCNRLIIQSDCMEVVQ 751


>gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japonica Group]
          Length = 1395

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 9/229 (3%)
 Frame = +2

Query: 2    LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKK----AQ 169
            L+  +  L   HV   GGC +C    +   H +F C   +++W      D +++     +
Sbjct: 560  LVPCRAILANRHVGDSGGCPVCQNGPEDIKHMIFTCARAKQVWNSLGVEDRIQRLCMTER 619

Query: 170  AGDIIDVAVWMKE----RLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADF 337
            +G +I   + ++E     L+    E      W +W E++  VHG   ++ A      A  
Sbjct: 620  SGSVILEEILIREDQVQDLQVGFAELVITAAWYIWWERRQLVHGEAVQRPARSGMAIAAL 679

Query: 338  LSAFRIAQKQTSFVGNKESKIEVQWSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGE 517
               +++A K       K+S +   W KP      ++VDA ++        G  IR+  G 
Sbjct: 680  TKNYKLATK-------KDSVLRQGWKKPPEGKVMVNVDAGFDEMGGCGTVGSVIRDCSGG 732

Query: 518  VVGFGTKY-EHLDCVLDDELRAIRDGLIRARDAGIDLVIVYSDSLMAVQ 661
            V+     +  HL      E  A+++GL+ A+  G + +I+ SD +  VQ
Sbjct: 733  VLAAAHSFVPHLVDAPMAEAFALKEGLMLAQQIGCNRLIIQSDCMEVVQ 781


>gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indica Group]
          Length = 1546

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 9/229 (3%)
 Frame = +2

Query: 2    LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKK----AQ 169
            L+  +  L   HV   GGC +C    +   H +F C   +++W      D +++     +
Sbjct: 711  LVPCRAILANRHVGDSGGCPVCQNGPEDIKHMIFTCARAKQVWNSLGVEDRIQRLCMTER 770

Query: 170  AGDIIDVAVWMKE----RLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADF 337
            +G +I   + ++E     L+    E      W +W E++  VHG   ++ A      A  
Sbjct: 771  SGSVILEEILIREDQVQDLQVGFAELVITAAWYIWWERRQLVHGEAVQRPARSGMAIAAL 830

Query: 338  LSAFRIAQKQTSFVGNKESKIEVQWSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGE 517
               +++A K       K+S +   W KP      ++VDA ++        G  IR+  G 
Sbjct: 831  TKNYKLATK-------KDSVLRQGWKKPPEGKVMVNVDAGFDEMGGCGTVGSVIRDCSGG 883

Query: 518  VVGFGTKY-EHLDCVLDDELRAIRDGLIRARDAGIDLVIVYSDSLMAVQ 661
            V+     +  HL      E  A+++GL+ A+  G + +I+ SD +  VQ
Sbjct: 884  VLAAAHSFVPHLVDAPMAEAFALKEGLMLAQQIGCNRLIIQSDCMEVVQ 932


>gb|EXB89969.1| hypothetical protein L484_023622 [Morus notabilis]
          Length = 756

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 1/221 (0%)
 Frame = +2

Query: 5   IATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKKAQAGDII 184
           + T  NL R  +     C     ++++  H+L+ C TV ++W+ S FW  LK  +AG   
Sbjct: 43  LPTFANLVRRGINCATRCQHYGEEDESIWHALWMCSTVIQVWEVSAFWHKLKPLKAGGFE 102

Query: 185 DVAVWMKERLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADFLSAFRIAQK 364
            + V       + + E F    W +W  +  F+H    ++    +      ++ F+    
Sbjct: 103 ALCVMFSNVATEEDLEIFCVLAWTIWAARNQFIHHRLYREPTDILGKTGRIIAEFQSCCN 162

Query: 365 QTSFVGNKESKIEVQWSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFGTK-Y 541
             +         +V+W  P     +L+ DA      +    G  IR+ +G V     K  
Sbjct: 163 PAAKHRTTVPVSKVRWKPPVAGLFKLNTDASVREGTSSIGIGVVIRDGDGIVCACLVKRI 222

Query: 542 EHLDCVLDDELRAIRDGLIRARDAGIDLVIVYSDSLMAVQA 664
                    E  A+R+GLI A++ G  + +   D++  VQA
Sbjct: 223 AGSFSPFLAECMALREGLIFAQERGFFISVAEFDAVCVVQA 263


>ref|XP_006450894.1| hypothetical protein CICLE_v10010478mg, partial [Citrus clementina]
           gi|557554120|gb|ESR64134.1| hypothetical protein
           CICLE_v10010478mg, partial [Citrus clementina]
          Length = 250

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 1/191 (0%)
 Frame = +2

Query: 92  HSLFYCQTVREIWKKSEFWDLLKKAQAGDIIDVAVWMKERLEKVNFEAFACYTWAVWKEK 271
           H+L  C+  R++W+ S   ++  K    D    ++ +   L K  FE F    W++W+ +
Sbjct: 3   HALLRCKMTRKVWELSNVAEIFDKNSFTDFYSASLNLHTSLPKEKFEGFVALAWSMWRTR 62

Query: 272 QTFVHGNGKKKMATEVSWAADFLSAFRIAQKQ-TSFVGNKESKIEVQWSKPDTNYCRLDV 448
              +       +++ +  A     A++ AQ+     +G      E +W  PD N+ RL+ 
Sbjct: 63  NLTLFTKEGMDISSTLIKADRVSQAYKDAQETCIKSIGAPLVITEERWFSPDKNWFRLNS 122

Query: 449 DACYNTKENRYATGGAIRNSEGEVVGFGTKYEHLDCVLDDELRAIRDGLIRARDAGIDLV 628
           DA  N  +     G  IRNS+GE              +D    AI +G+    + G+  +
Sbjct: 123 DAAINEVDGLAGLGVVIRNSKGE-------------FMDASTSAILEGIKLVEELGLIPL 169

Query: 629 IVYSDSLMAVQ 661
           +V SDSL  ++
Sbjct: 170 VVESDSLNVIR 180


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 2/184 (1%)
 Frame = +2

Query: 5    IATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWD-LLKKAQAGDI 181
            + T+V L    V     CALC  +++ + H  FYC   R+ W++   W  + +KAQ    
Sbjct: 1441 LPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCTKSRQCWQQLGLWSKVQQKAQLNLS 1500

Query: 182  IDVAVW-MKERLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADFLSAFRIA 358
              V ++ + + L+      +AC  W++WK++   +  N     A       + L+ ++ A
Sbjct: 1501 FGVTMFEILQELDSSQRVIWACVMWSIWKQRNDCIWRNEVMTTAAVRDRGLNLLTGWQNA 1560

Query: 359  QKQTSFVGNKESKIEVQWSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFGTK 538
            Q                W KPD  + + +VDA +  + NR   G  IR+  G +V   T 
Sbjct: 1561 QD--------------IWRKPDEGHFKCNVDAAFFKESNRVGIGICIRDDSGRLVKARTS 1606

Query: 539  YEHL 550
            +  L
Sbjct: 1607 WSTL 1610


>ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 335

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 51/221 (23%), Positives = 89/221 (40%), Gaps = 2/221 (0%)
 Frame = +2

Query: 2   LIATKVNLNRHHVPAEGGCALCHYDNDTTTHSLFYCQTVREIWKKSEFWDLLKKAQAGDI 181
           L+ T  NL +  +  E  C  C    +   H L  C+  +++W++S   D + K  + ++
Sbjct: 40  LLPTAENLCKRGIVQEAHCKRCGNKVENILHVLVTCKAAKKVWQRSPVADAVHKIDSSNL 99

Query: 182 IDVAVWMKERLEKVNFEAFACYTWAVWKEKQTFVHGNGKKKMATEVSWAADFLSAFRIAQ 361
                 ++  L   +FE      W +W  +  FV    K      V+ A     A++  Q
Sbjct: 100 FGELTKLQRSLSNDDFELLLVLLWIIWYARNKFVFEGMKIDPGISVAKAEAIKEAYKRTQ 159

Query: 362 KQTSFVGNKESKIEV-QWSKPDTNYCRLDVDACYNTKENRYATGGAIRNSEGEVVGFGTK 538
                VG    + E  +W+ P   + +++VDA  + K      G  I++  G+      K
Sbjct: 160 FPEMLVGKNSLRQEQNKWAPPPPRWVKINVDAAIDAKSKCSGLGAVIKDPSGKCFVAAVK 219

Query: 539 -YEHLDCVLDDELRAIRDGLIRARDAGIDLVIVYSDSLMAV 658
                  VL  E  A   G   A++ G+  VI+ +DS   V
Sbjct: 220 SVTSKGDVLLAEAEADEWGTYLAKEEGMQAVILETDSKATV 260