BLASTX nr result

ID: Rehmannia23_contig00028641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00028641
         (295 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341606.1| PREDICTED: cleavage stimulation factor subun...    59   5e-07
gb|EXB56914.1| hypothetical protein L484_019959 [Morus notabilis]      57   2e-06
ref|XP_004235784.1| PREDICTED: uncharacterized protein LOC101248...    56   4e-06

>ref|XP_006341606.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
           [Solanum tuberosum]
          Length = 380

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
 Frame = +3

Query: 6   QSNIKPTPSFPGQIG-QNQMRKXXXXXXXXXXXXXXMVXXXXXXXXXXXXXXXXXXXXHP 182
           Q  ++ TPS PG IG Q Q RK              +                     HP
Sbjct: 86  QPIVQTTPSLPGHIGIQEQTRKQQQNQPAPIVPSASL---------PPSNLQSTSMPSHP 136

Query: 183 LQPVQQPKGHLGAQSAQMSIPQSSQVPNLTQLPHHTS 293
           LQ VQQ KG +GAQ+  +S+PQ+SQVPN++QLP H++
Sbjct: 137 LQTVQQQKGLIGAQATPISLPQTSQVPNMSQLPRHSA 173


>gb|EXB56914.1| hypothetical protein L484_019959 [Morus notabilis]
          Length = 393

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/97 (34%), Positives = 41/97 (42%)
 Frame = +3

Query: 3   QQSNIKPTPSFPGQIGQNQMRKXXXXXXXXXXXXXXMVXXXXXXXXXXXXXXXXXXXXHP 182
           QQSN++ T +  GQ+G                                          HP
Sbjct: 92  QQSNVQATQALSGQVGLKDQTGAPQIRTPARMQHQYQPVMATSTAIPGVNIPSQPMPLHP 151

Query: 183 LQPVQQPKGHLGAQSAQMSIPQSSQVPNLTQLPHHTS 293
           LQ  QQPKGHL AQ    S+PQSSQ+PN+  LP H+S
Sbjct: 152 LQTPQQPKGHLNAQVTPTSLPQSSQLPNVPALPLHSS 188


>ref|XP_004235784.1| PREDICTED: uncharacterized protein LOC101248183 [Solanum
           lycopersicum]
          Length = 380

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
 Frame = +3

Query: 6   QSNIKPTPSFPGQIG-QNQMRKXXXXXXXXXXXXXXMVXXXXXXXXXXXXXXXXXXXXHP 182
           Q  ++ TPS PG IG Q Q RK              +                     H 
Sbjct: 86  QPIVQATPSLPGHIGIQEQTRKQQQNQAAPTVPSASL---------PPSNLQSTSVPSHT 136

Query: 183 LQPVQQPKGHLGAQSAQMSIPQSSQVPNLTQLPHHTS 293
           LQ VQQ KG +GAQ+  +S+PQ+SQVPN++QLP H++
Sbjct: 137 LQTVQQQKGLIGAQATPISLPQTSQVPNMSQLPRHSA 173


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