BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00028448
         (854 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   110   8e-22
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit...   105   2e-20
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   105   3e-20
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr...   100   9e-19
ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mit...    98   4e-18
ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mit...    98   4e-18
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]            90   1e-15
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...    89   3e-15
ref|XP_004511295.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    88   3e-15
gb|EMJ01009.1| hypothetical protein PRUPE_ppa004969mg [Prunus pe...    87   1e-14
gb|EMJ01008.1| hypothetical protein PRUPE_ppa004969mg [Prunus pe...    87   1e-14
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu...    86   1e-14
gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theob...    86   2e-14
gb|ESW29223.1| hypothetical protein PHAVU_002G053600g [Phaseolus...    84   5e-14
ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [A...    84   8e-14
ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mit...    83   1e-13
ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mit...    83   1e-13
ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatul...    83   1e-13
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    80   1e-12
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    80   1e-12

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  110 bits (274), Expect = 8e-22
 Identities = 52/99 (52%), Positives = 72/99 (72%), Gaps = 4/99 (4%)
 Frame = -3

Query: 852 GWQAHKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNI 673
           GWQAH+K  Q F S  +   D+ ++  K +  GL+LE+GSI DKQP LHLHCK+M+LPN+
Sbjct: 377 GWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILDKQPHLHLHCKQMVLPNV 436

Query: 672 SLALQRGRIISD----QMESIRLDAPLPAHMQRSWDLLN 568
           SLALQ  ++ ++    ++ES+   APLP+HMQRSWD+LN
Sbjct: 437 SLALQNLQLSAECDLSELESLEFVAPLPSHMQRSWDILN 475


>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
           [Solanum tuberosum]
          Length = 467

 Score =  105 bits (263), Expect = 2e-20
 Identities = 55/99 (55%), Positives = 69/99 (69%), Gaps = 4/99 (4%)
 Frame = -3

Query: 852 GWQAHKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNI 673
           GWQAH+KL       S L    ++ + K +   L L NGSISDKQP LHLHCK+M+LPNI
Sbjct: 368 GWQAHRKLKHLPLPTSVLNLGVQIPRQKPDPFNLRLGNGSISDKQPHLHLHCKEMVLPNI 427

Query: 672 SLALQRGRIISD----QMESIRLDAPLPAHMQRSWDLLN 568
           SLALQR +++SD     +ESI+L APLP HMQ+SWD L+
Sbjct: 428 SLALQRAQVVSDTDLVDVESIKLVAPLPFHMQKSWDCLS 466


>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
           lycopersicum]
          Length = 467

 Score =  105 bits (261), Expect = 3e-20
 Identities = 55/99 (55%), Positives = 69/99 (69%), Gaps = 4/99 (4%)
 Frame = -3

Query: 852 GWQAHKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNI 673
           GWQAH+KL       S L    ++ + K +   L L NGSISDKQP LHLHCK+M+LPNI
Sbjct: 368 GWQAHRKLKHLPLPTSVLNLVVEIPRQKPDPFNLRLGNGSISDKQPHLHLHCKEMVLPNI 427

Query: 672 SLALQRGRIISD----QMESIRLDAPLPAHMQRSWDLLN 568
           SLALQR +++SD     +ESI+L APLP HMQ+SWD L+
Sbjct: 428 SLALQRAQVVSDADLVDVESIKLVAPLPFHMQKSWDCLS 466


>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
           gi|557524859|gb|ESR36165.1| hypothetical protein
           CICLE_v10028283mg [Citrus clementina]
          Length = 494

 Score =  100 bits (248), Expect = 9e-19
 Identities = 49/99 (49%), Positives = 70/99 (70%), Gaps = 4/99 (4%)
 Frame = -3

Query: 852 GWQAHKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNI 673
           GWQ H+K  Q+  S  +   +D+  + K    GL+LE+GSI +KQP LHLHCK+M LPN+
Sbjct: 395 GWQTHRKWKQFHPSDLNKDSNDETPKEKTLHFGLDLESGSILEKQPGLHLHCKEMTLPNV 454

Query: 672 SLALQRGRIIS----DQMESIRLDAPLPAHMQRSWDLLN 568
           S A+Q+ ++ S     ++ES++L APLP+HMQRSWD+LN
Sbjct: 455 SQAIQKVQLSSGCDVSKLESLKLVAPLPSHMQRSWDVLN 493


>ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X3 [Citrus sinensis]
          Length = 275

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 47/99 (47%), Positives = 70/99 (70%), Gaps = 4/99 (4%)
 Frame = -3

Query: 852 GWQAHKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNI 673
           GWQ H+K  Q+  S      ++++ + K    GL+LE+GSI +KQP LHLHCK+M LPN+
Sbjct: 176 GWQTHRKWKQFHPSDLSKDSNEEIPKEKTLHFGLDLESGSILEKQPRLHLHCKEMTLPNV 235

Query: 672 SLALQRGRIIS----DQMESIRLDAPLPAHMQRSWDLLN 568
           S A+Q+ ++ S     ++E+++L APLP+HMQRSWD+LN
Sbjct: 236 SQAIQKVQLSSGCDVSKLETLKLVAPLPSHMQRSWDVLN 274


>ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X1 [Citrus sinensis] gi|568867349|ref|XP_006487000.1|
           PREDICTED: RNA pseudouridine synthase 4,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 362

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 47/99 (47%), Positives = 70/99 (70%), Gaps = 4/99 (4%)
 Frame = -3

Query: 852 GWQAHKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNI 673
           GWQ H+K  Q+  S      ++++ + K    GL+LE+GSI +KQP LHLHCK+M LPN+
Sbjct: 263 GWQTHRKWKQFHPSDLSKDSNEEIPKEKTLHFGLDLESGSILEKQPRLHLHCKEMTLPNV 322

Query: 672 SLALQRGRIIS----DQMESIRLDAPLPAHMQRSWDLLN 568
           S A+Q+ ++ S     ++E+++L APLP+HMQRSWD+LN
Sbjct: 323 SQAIQKVQLSSGCDVSKLETLKLVAPLPSHMQRSWDVLN 361


>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
          Length = 470

 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 47/99 (47%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
 Frame = -3

Query: 852 GWQAHKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNI 673
           GWQAH+          D K  + + + K+   GL ++NGSIS+K P LHLHCK+M+LPNI
Sbjct: 371 GWQAHRDWKPLHWPDPDNKCIEVLPKRKNLPFGLNMDNGSISEKHPRLHLHCKQMVLPNI 430

Query: 672 SLALQRGRIISD----QMESIRLDAPLPAHMQRSWDLLN 568
           S  LQ  +  SD    ++E ++LDAPLP++MQRSW L N
Sbjct: 431 SHVLQNVQRYSDYELSRLERLKLDAPLPSYMQRSWHLTN 469


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 46/100 (46%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
 Frame = -3

Query: 852 GWQAHKKLGQY-FDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPN 676
           GWQ H+K  Q  F +   +  ++ + + K    G++LE+GSIS+K P LHLHCK+M+LP+
Sbjct: 437 GWQVHRKWKQLPFPNLEKISNENALCK-KILPFGIDLESGSISEKHPRLHLHCKQMVLPD 495

Query: 675 ISLALQRGRIISD----QMESIRLDAPLPAHMQRSWDLLN 568
           +S AL+  +  S+     ++SI LDAPLP++MQRSWD+LN
Sbjct: 496 VSQALRGVQTSSNYDFSDLKSIELDAPLPSYMQRSWDILN 535


>ref|XP_004511295.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cicer
           arietinum]
          Length = 458

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 49/106 (46%), Positives = 66/106 (62%), Gaps = 11/106 (10%)
 Frame = -3

Query: 852 GWQAHKKLGQYF-----DSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKM 688
           GWQAHKK G +      DS  +L +++ +        GL L  GSISDK P LHLHCK++
Sbjct: 358 GWQAHKKWGHFDLCNLEDSTEELLKEETLP------FGLNLNKGSISDKHPRLHLHCKQI 411

Query: 687 ILPNISLALQRGRIIS------DQMESIRLDAPLPAHMQRSWDLLN 568
           ILPNIS ALQ  + +S        +E+++L+A LP +MQRSWD+ N
Sbjct: 412 ILPNISQALQDVQSLSASNCDLSVVEALKLEAELPPYMQRSWDVTN 457


>gb|EMJ01009.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
          Length = 483

 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 4/99 (4%)
 Frame = -3

Query: 852 GWQAHKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNI 673
           GWQ H+       S ++   D++  + K+    L +E+GS+S+K P LHLHCK+M+LPN+
Sbjct: 384 GWQTHRNWKPLAWSNNECHSDEEFPKRKNLPFDLNMESGSVSEKNPRLHLHCKQMVLPNV 443

Query: 672 SLALQRGRIISD----QMESIRLDAPLPAHMQRSWDLLN 568
           +LALQ  ++ SD    ++ES+ L A LP+ MQRSW++ N
Sbjct: 444 NLALQNVKLHSDSDLSELESLELVAALPSFMQRSWNITN 482


>gb|EMJ01008.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
          Length = 481

 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 4/99 (4%)
 Frame = -3

Query: 852 GWQAHKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNI 673
           GWQ H+       S ++   D++  + K+    L +E+GS+S+K P LHLHCK+M+LPN+
Sbjct: 382 GWQTHRNWKPLAWSNNECHSDEEFPKRKNLPFDLNMESGSVSEKNPRLHLHCKQMVLPNV 441

Query: 672 SLALQRGRIISD----QMESIRLDAPLPAHMQRSWDLLN 568
           +LALQ  ++ SD    ++ES+ L A LP+ MQRSW++ N
Sbjct: 442 NLALQNVKLHSDSDLSELESLELVAALPSFMQRSWNITN 480


>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
           gi|550331407|gb|EEE87831.2| hypothetical protein
           POPTR_0009s09860g [Populus trichocarpa]
          Length = 471

 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
 Frame = -3

Query: 849 WQAHKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNIS 670
           WQAH+   Q   S  +   +DK    K     L+L++GSIS+K P LHLHCK+M+LP++S
Sbjct: 373 WQAHRNWKQLQWSNIEDNSNDKSLSEKILPFALDLDSGSISEKHPRLHLHCKQMVLPDVS 432

Query: 669 LALQRGRIISD----QMESIRLDAPLPAHMQRSWDLL 571
            ALQ  ++ SD    Q+ S++ DAPLP +M++SWD+L
Sbjct: 433 KALQDVQLSSDYDFSQLASLKFDAPLPPYMKKSWDIL 469


>gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
          Length = 477

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 41/99 (41%), Positives = 66/99 (66%), Gaps = 4/99 (4%)
 Frame = -3

Query: 852 GWQAHKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNI 673
           GWQAH++     +S      +DK  +      GL +++GSIS K+P LHLHC++MI PN+
Sbjct: 378 GWQAHRRWQHLPESDLKKSSNDKCPEENMLPFGLNMDSGSISAKRPRLHLHCREMIFPNV 437

Query: 672 SLALQRGRIISD----QMESIRLDAPLPAHMQRSWDLLN 568
           S ALQ  ++ +D    +++S+ + APLP++MQ+SWD++N
Sbjct: 438 SQALQNLQLSTDHDLSKLKSLEVVAPLPSYMQKSWDIMN 476


>gb|ESW29223.1| hypothetical protein PHAVU_002G053600g [Phaseolus vulgaris]
          Length = 432

 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 46/97 (47%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
 Frame = -3

Query: 852 GWQAHKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNI 673
           GWQAH+K G  FD ++     ++  + +    GL L NGSIS+ +P LHLHCKK++LPNI
Sbjct: 334 GWQAHRKWGN-FDLSNVEDSCEEHLKEETLPFGLNLNNGSISENRPRLHLHCKKIVLPNI 392

Query: 672 SLALQRGRIISD----QMESIRLDAPLPAHMQRSWDL 574
           S ALQ  +  S+    Q+E ++L A LP +MQRSWD+
Sbjct: 393 SEALQNVQSFSNCDLSQVEGLQLVADLPPYMQRSWDI 429


>ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda]
           gi|548850328|gb|ERN08832.1| hypothetical protein
           AMTR_s00015p00025410 [Amborella trichopoda]
          Length = 457

 Score = 83.6 bits (205), Expect = 8e-14
 Identities = 45/99 (45%), Positives = 65/99 (65%), Gaps = 4/99 (4%)
 Frame = -3

Query: 852 GWQAHKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNI 673
           GW AH+K   +      LK ++++ +      GL+LE GS+SDK+P LHLHC++M LPN+
Sbjct: 361 GWNAHRKWKPF----PTLKFEERLNRKAP--FGLDLEGGSVSDKKPRLHLHCRQMTLPNM 414

Query: 672 SLALQ--RGRIISD--QMESIRLDAPLPAHMQRSWDLLN 568
           SLA Q    + + D  ++E + L APLP HM+RSWD+LN
Sbjct: 415 SLAFQHLHEQSVDDLSKLEKLDLVAPLPLHMRRSWDILN 453


>ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X2 [Glycine max]
          Length = 429

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
 Frame = -3

Query: 852 GWQAHKKLGQYF-----DSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKM 688
           GWQAH+K G +      DS  +L  ++K+        GL L  GSIS+  P LHLHCK+M
Sbjct: 331 GWQAHRKWGHFDLPNVEDSREELLNEEKLP------FGLNLNKGSISENHPRLHLHCKQM 384

Query: 687 ILPNISLALQRGRIIS----DQMESIRLDAPLPAHMQRSWDLLN 568
           +LPNIS ALQ  +  S      +E + L A LP +MQRSWD+ N
Sbjct: 385 VLPNISQALQNVQSASSCDLSLVEELELVADLPPYMQRSWDVTN 428


>ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X1 [Glycine max]
          Length = 427

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
 Frame = -3

Query: 852 GWQAHKKLGQYF-----DSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKM 688
           GWQAH+K G +      DS  +L  ++K+        GL L  GSIS+  P LHLHCK+M
Sbjct: 329 GWQAHRKWGHFDLPNVEDSREELLNEEKLP------FGLNLNKGSISENHPRLHLHCKQM 382

Query: 687 ILPNISLALQRGRIIS----DQMESIRLDAPLPAHMQRSWDLLN 568
           +LPNIS ALQ  +  S      +E + L A LP +MQRSWD+ N
Sbjct: 383 VLPNISQALQNVQSASSCDLSLVEELELVADLPPYMQRSWDVTN 426


>ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355501934|gb|AES83137.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 430

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 48/103 (46%), Positives = 66/103 (64%), Gaps = 8/103 (7%)
 Frame = -3

Query: 852 GWQAHKKLGQYFDSASDLKRDDKMTQVKHNII--GLELENGSISDKQPFLHLHCKKMILP 679
           G QAHKK GQ+    S+L+ D     +K   +  GL L  GSISDK P LHLHCK+++LP
Sbjct: 330 GRQAHKKWGQF--DFSNLE-DSTEEHLKEEALPFGLNLNKGSISDKHPRLHLHCKQIVLP 386

Query: 678 NISLALQRGRIISDQ------MESIRLDAPLPAHMQRSWDLLN 568
           NIS ALQ  + +SD       +ES+ L+A LP +M++SW++ N
Sbjct: 387 NISQALQNVQSVSDSSYDLSAVESLELEADLPPYMKKSWEVTN 429


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
 Frame = -3

Query: 852 GWQAHKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNI 673
           GWQAHK    +    S+  ++    Q      GL+ E+GSI++  P LHLHCK++ LP++
Sbjct: 379 GWQAHKNWKPF---CSNFHKNQGKKQFLP--FGLDFESGSIAENSPRLHLHCKQLTLPDV 433

Query: 672 SLALQRGRIISD--QMESIRLDAPLPAHMQRSWDLLN 568
           S AL    +  D  ++E + LDAPLP++MQ+SWD++N
Sbjct: 434 SFALHNDSLDRDCSRLECLELDAPLPSYMQKSWDIIN 470


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 466

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
 Frame = -3

Query: 852 GWQAHKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNI 673
           GWQAHK    +    S+  ++    Q      GL+ E+GSI++  P LHLHCK++ LP++
Sbjct: 374 GWQAHKNWKPF---CSNFHKNQGKKQFLP--FGLDFESGSIAENNPRLHLHCKQLTLPDV 428

Query: 672 SLALQRGRIISD--QMESIRLDAPLPAHMQRSWDLLN 568
           S AL    +  D  ++E + LDAPLP++MQ+SWD++N
Sbjct: 429 SFALHNDSLDRDCSRLECLELDAPLPSYMQKSWDIIN 465