BLASTX nr result
ID: Rehmannia23_contig00028386
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00028386
(323 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ00638.1| hypothetical protein PRUPE_ppa026671mg [Prunus pe... 102 4e-20
ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
ref|XP_006357212.1| PREDICTED: pentatricopeptide repeat-containi... 99 5e-19
ref|XP_004239364.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
emb|CBI37820.3| unnamed protein product [Vitis vinifera] 97 3e-18
ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
ref|XP_004292461.1| PREDICTED: pentatricopeptide repeat-containi... 95 9e-18
ref|XP_006475400.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_006451414.1| hypothetical protein CICLE_v10007675mg [Citr... 94 2e-17
gb|EPS71093.1| hypothetical protein M569_03667, partial [Genlise... 94 2e-17
ref|XP_002521241.1| pentatricopeptide repeat-containing protein,... 93 3e-17
gb|EOX97561.1| Mitochondrial editing factor 9 isoform 1 [Theobro... 93 4e-17
ref|XP_002312939.2| hypothetical protein POPTR_0009s14110g [Popu... 91 1e-16
gb|EXB24043.1| hypothetical protein L484_006075 [Morus notabilis] 89 5e-16
ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containi... 89 6e-16
gb|ESW31026.1| hypothetical protein PHAVU_002G202800g [Phaseolus... 87 2e-15
ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_004504743.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|NP_176416.1| mitochondrial editing factor 9 [Arabidopsis tha... 86 5e-15
>gb|EMJ00638.1| hypothetical protein PRUPE_ppa026671mg [Prunus persica]
Length = 611
Score = 102 bits (255), Expect = 4e-20
Identities = 49/64 (76%), Positives = 54/64 (84%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNV LARVAAEALMRLEPESS PYVLLYNMY D E W DA ++R+MMDKN+I+K YSR
Sbjct: 546 NNVALARVAAEALMRLEPESSAPYVLLYNMYADAELWDDAAEVRLMMDKNNIRKHAAYSR 605
Query: 143 VDSS 132
VDSS
Sbjct: 606 VDSS 609
>ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 100 bits (248), Expect = 3e-19
Identities = 45/65 (69%), Positives = 56/65 (86%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNVE+AR AAEALM+L+PESS PYVLL+NMY DV RW DA ++R MM+KN+++K+ GYSR
Sbjct: 600 NNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYSR 659
Query: 143 VDSSC 129
VDS C
Sbjct: 660 VDSYC 664
>ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 100 bits (248), Expect = 3e-19
Identities = 45/65 (69%), Positives = 56/65 (86%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNVE+AR AAEALM+L+PESS PYVLL+NMY DV RW DA ++R MM+KN+++K+ GYSR
Sbjct: 600 NNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYSR 659
Query: 143 VDSSC 129
VDS C
Sbjct: 660 VDSYC 664
>ref|XP_006357212.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Solanum tuberosum]
Length = 668
Score = 99.4 bits (246), Expect = 5e-19
Identities = 47/66 (71%), Positives = 56/66 (84%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNVELAR+AAEALMRLEPESSGPYVLLYNMY D RW DA++IR++M+ N I+KE +SR
Sbjct: 603 NNVELARIAAEALMRLEPESSGPYVLLYNMYADAGRWDDANEIRMLMETNKIRKEPAHSR 662
Query: 143 VDSSCS 126
V S+ S
Sbjct: 663 VGSTSS 668
>ref|XP_004239364.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Solanum lycopersicum]
Length = 661
Score = 97.1 bits (240), Expect = 2e-18
Identities = 46/66 (69%), Positives = 55/66 (83%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNVELAR+AAEALMRLEPESSGPYVLLYNMY D RW DA++IR++M+ N I+KE +S
Sbjct: 596 NNVELARIAAEALMRLEPESSGPYVLLYNMYADAGRWDDANEIRMLMETNKIRKEPAHST 655
Query: 143 VDSSCS 126
V S+ S
Sbjct: 656 VGSTSS 661
>emb|CBI37820.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/66 (69%), Positives = 58/66 (87%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNVELARVAAEALM+LEPESS PYVLL+NMY DV +W +A ++R+MM++N+I+K+ GYS
Sbjct: 438 NNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIRKQPGYSW 497
Query: 143 VDSSCS 126
VDSS S
Sbjct: 498 VDSSHS 503
>ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/66 (69%), Positives = 58/66 (87%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNVELARVAAEALM+LEPESS PYVLL+NMY DV +W +A ++R+MM++N+I+K+ GYS
Sbjct: 615 NNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIRKQPGYSW 674
Query: 143 VDSSCS 126
VDSS S
Sbjct: 675 VDSSHS 680
>ref|XP_004292461.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 942
Score = 95.1 bits (235), Expect = 9e-18
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NN ELA+VAAEALMRLEPESS PYVLLYNMY D W +A +R++MD N I K++GYSR
Sbjct: 877 NNTELAKVAAEALMRLEPESSAPYVLLYNMYADAGLWDEAAAVRLLMDDNKIIKQKGYSR 936
Query: 143 VDSS 132
VDSS
Sbjct: 937 VDSS 940
>ref|XP_006475400.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568842976|ref|XP_006475401.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 670
Score = 94.0 bits (232), Expect = 2e-17
Identities = 44/64 (68%), Positives = 54/64 (84%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNVELA+VAAEALM++EPE+S PYVLLYNMY DV RW DA+++R++M N+IKK GYS
Sbjct: 604 NNVELAQVAAEALMKVEPENSTPYVLLYNMYADVGRWDDANEVRLLMKSNNIKKPTGYSW 663
Query: 143 VDSS 132
VD S
Sbjct: 664 VDFS 667
>ref|XP_006451414.1| hypothetical protein CICLE_v10007675mg [Citrus clementina]
gi|557554640|gb|ESR64654.1| hypothetical protein
CICLE_v10007675mg [Citrus clementina]
Length = 662
Score = 94.0 bits (232), Expect = 2e-17
Identities = 44/64 (68%), Positives = 54/64 (84%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNVELA+VAAEALM++EPE+S PYVLLYNMY DV RW DA+++R++M N+IKK GYS
Sbjct: 596 NNVELAQVAAEALMKVEPENSTPYVLLYNMYADVGRWDDANEVRLLMKSNNIKKPTGYSW 655
Query: 143 VDSS 132
VD S
Sbjct: 656 VDFS 659
>gb|EPS71093.1| hypothetical protein M569_03667, partial [Genlisea aurea]
Length = 607
Score = 94.0 bits (232), Expect = 2e-17
Identities = 40/58 (68%), Positives = 54/58 (93%)
Frame = -1
Query: 320 NVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYS 147
NVE+AR++ EALM+LEP+SSGPY+LLYNMYV+ +W++AD+IRI+M+K +IKKERGYS
Sbjct: 550 NVEIARISGEALMKLEPQSSGPYILLYNMYVEAGKWNEADEIRIVMEKKNIKKERGYS 607
>ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539509|gb|EEF41097.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 662
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/64 (70%), Positives = 55/64 (85%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNVE+ARVAAEALM+LEP+SS PY+LLYNMYVDV +W +A +IR MM++N+IKKE S
Sbjct: 597 NNVEMARVAAEALMKLEPDSSVPYILLYNMYVDVGQWDNAAEIRSMMERNNIKKEAAISW 656
Query: 143 VDSS 132
VDSS
Sbjct: 657 VDSS 660
>gb|EOX97561.1| Mitochondrial editing factor 9 isoform 1 [Theobroma cacao]
gi|508705666|gb|EOX97562.1| Mitochondrial editing factor
9 isoform 1 [Theobroma cacao]
Length = 657
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/65 (64%), Positives = 52/65 (80%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNVELARVAAEALM LEPESS PY+LLYNMY D +W DA ++R MM++N ++K+ YS
Sbjct: 592 NNVELARVAAEALMSLEPESSAPYILLYNMYADKGQWDDAVEVREMMERNKVRKQAAYSW 651
Query: 143 VDSSC 129
+D SC
Sbjct: 652 IDPSC 656
>ref|XP_002312939.2| hypothetical protein POPTR_0009s14110g [Populus trichocarpa]
gi|550331692|gb|EEE86894.2| hypothetical protein
POPTR_0009s14110g [Populus trichocarpa]
Length = 611
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/64 (65%), Positives = 54/64 (84%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
N +E+ARVAAEAL+RLEP+SS PYVLLYNMY DV +W A ++RIMM++++IKK+ YS
Sbjct: 546 NKIEVARVAAEALIRLEPDSSAPYVLLYNMYADVGQWDSAAEVRIMMERSNIKKQAAYSW 605
Query: 143 VDSS 132
VDSS
Sbjct: 606 VDSS 609
>gb|EXB24043.1| hypothetical protein L484_006075 [Morus notabilis]
Length = 708
Score = 89.4 bits (220), Expect = 5e-16
Identities = 40/61 (65%), Positives = 52/61 (85%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNVELA++AA+ALMR+EP SS PYVLLYNMY D +W DA ++R+ M++N+I K+RGYSR
Sbjct: 615 NNVELAQIAAQALMRIEPGSSAPYVLLYNMYADAGQWGDAARVRLTMEENNIIKQRGYSR 674
Query: 143 V 141
V
Sbjct: 675 V 675
>ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 649
Score = 89.0 bits (219), Expect = 6e-16
Identities = 39/62 (62%), Positives = 53/62 (85%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNVELA VAA+AL+RLEPESS PYVLLYNMY ++ +W DA+ +R++M++ ++KK+ GYS
Sbjct: 588 NNVELALVAADALIRLEPESSAPYVLLYNMYANLGQWDDAESVRVLMEEKNVKKQAGYSW 647
Query: 143 VD 138
VD
Sbjct: 648 VD 649
>gb|ESW31026.1| hypothetical protein PHAVU_002G202800g [Phaseolus vulgaris]
Length = 640
Score = 87.4 bits (215), Expect = 2e-15
Identities = 38/62 (61%), Positives = 53/62 (85%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNV+LA VAA+AL+RLEPESS PYVLLYNMY ++ +W DA+ +R++M++ ++KK+ GYS
Sbjct: 579 NNVQLAIVAADALIRLEPESSAPYVLLYNMYANLGQWDDAESVRVLMEEKNVKKQAGYSW 638
Query: 143 VD 138
VD
Sbjct: 639 VD 640
>ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 647
Score = 87.4 bits (215), Expect = 2e-15
Identities = 38/62 (61%), Positives = 53/62 (85%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNVELA VAA+AL+RLEPESS PYVLLYN+Y ++ +W DA+ +R++M++ ++KK+ GYS
Sbjct: 586 NNVELALVAADALIRLEPESSAPYVLLYNIYANLGQWDDAESVRVLMEEKNVKKQAGYSW 645
Query: 143 VD 138
VD
Sbjct: 646 VD 647
>ref|XP_004504743.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like isoform X1 [Cicer arietinum]
gi|502142002|ref|XP_004504744.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like isoform X2 [Cicer arietinum]
gi|502142004|ref|XP_004504745.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like isoform X3 [Cicer arietinum]
gi|502142006|ref|XP_004504746.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like isoform X4 [Cicer arietinum]
Length = 644
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/59 (66%), Positives = 51/59 (86%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYS 147
NNVELA+VAA+AL+ LEPESS PYVLLYNMY D+ +W DAD++R++M++ +IKK GYS
Sbjct: 585 NNVELAQVAAKALIGLEPESSAPYVLLYNMYADLGQWDDADRVRMLMEEKNIKKHAGYS 643
>ref|NP_176416.1| mitochondrial editing factor 9 [Arabidopsis thaliana]
gi|75097094|sp|O04590.1|PPR88_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g62260, mitochondrial; Flags: Precursor
gi|2160154|gb|AAB60776.1| F19K23.18 gene product
[Arabidopsis thaliana] gi|332195821|gb|AEE33942.1|
mitochondrial editing factor 9 [Arabidopsis thaliana]
Length = 656
Score = 85.9 bits (211), Expect = 5e-15
Identities = 43/64 (67%), Positives = 49/64 (76%)
Frame = -1
Query: 323 NNVELARVAAEALMRLEPESSGPYVLLYNMYVDVERWSDADQIRIMMDKNDIKKERGYSR 144
NNV LA VAAEA+ RLEPESS PYVLLYNMY D+ W +A Q+R+ M+ IKKERG S
Sbjct: 592 NNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSW 651
Query: 143 VDSS 132
VDSS
Sbjct: 652 VDSS 655