BLASTX nr result
ID: Rehmannia23_contig00028343
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00028343
(591 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS70603.1| hypothetical protein M569_04157, partial [Genlise... 162 5e-38
ref|XP_006353383.1| PREDICTED: zinc finger CCCH domain-containin... 109 6e-22
ref|XP_004234345.1| PREDICTED: zinc finger CCCH domain-containin... 107 2e-21
gb|EOY23073.1| Zinc finger WD40 repeat protein 1 isoform 2 [Theo... 98 2e-18
gb|EOY23072.1| Zinc finger WD40 repeat protein 1 isoform 1 [Theo... 98 2e-18
ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ric... 91 2e-16
ref|XP_002318843.1| hypothetical protein POPTR_0012s13800g [Popu... 88 2e-15
gb|EXC11889.1| Zinc finger CCCH domain-containing protein 48 [Mo... 84 2e-14
ref|XP_004513686.1| PREDICTED: zinc finger CCCH domain-containin... 84 2e-14
gb|ESW24345.1| hypothetical protein PHAVU_004G122600g [Phaseolus... 84 3e-14
ref|XP_004308123.1| PREDICTED: zinc finger CCCH domain-containin... 84 3e-14
gb|EMT32188.1| hypothetical protein F775_43820 [Aegilops tauschii] 83 5e-14
gb|EMS50999.1| Zinc finger CCCH domain-containing protein 17 [Tr... 83 5e-14
ref|XP_003548225.1| PREDICTED: zinc finger CCCH domain-containin... 83 5e-14
dbj|BAJ90661.1| predicted protein [Hordeum vulgare subsp. vulgare] 83 5e-14
dbj|BAJ93937.1| predicted protein [Hordeum vulgare subsp. vulgare] 83 5e-14
gb|EMJ19231.1| hypothetical protein PRUPE_ppa006002mg [Prunus pe... 82 8e-14
ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containin... 82 1e-13
ref|XP_003634083.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 82 1e-13
ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containin... 82 1e-13
>gb|EPS70603.1| hypothetical protein M569_04157, partial [Genlisea aurea]
Length = 440
Score = 162 bits (411), Expect = 5e-38
Identities = 77/101 (76%), Positives = 86/101 (85%), Gaps = 1/101 (0%)
Frame = -3
Query: 301 MDVDGGRRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELPTAGNGKRA 122
MDVDGGRRVF+R+GPS+STDNG+ KQQKVCFHWRQGKCTRFPCPFLHSELPTA NGKR
Sbjct: 1 MDVDGGRRVFNRMGPSASTDNGS--KQQKVCFHWRQGKCTRFPCPFLHSELPTASNGKRT 58
Query: 121 HQGFGPEDNYRGGGGLRRSGNYNFS-KNNTWGRVQSQQPVS 2
+QG G EDNYR GG+RRSGNYNFS ++TW R +QQ S
Sbjct: 59 NQGIGAEDNYR--GGIRRSGNYNFSNSSSTWSRANAQQSAS 97
>ref|XP_006353383.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
[Solanum tuberosum]
Length = 432
Score = 109 bits (272), Expect = 6e-22
Identities = 59/105 (56%), Positives = 69/105 (65%), Gaps = 13/105 (12%)
Frame = -3
Query: 301 MDVDGGRRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELP-------- 146
M++DG +RVF RLGPSS DN +NNKQQKVCFHWR G+C RFPCPFLH ELP
Sbjct: 1 MEMDGSKRVFQRLGPSSQGDN-SNNKQQKVCFHWRAGRCNRFPCPFLHRELPGPPQQQQQ 59
Query: 145 -TAGNG----KRAHQGFGPEDNYRGGGGLRRSGNYNFSKNNTWGR 26
AGNG KR H GF ++ G G+RR+ N+ NNTWGR
Sbjct: 60 HAAGNGMSSSKRPH-GFSDDNR---GAGMRRNPNF----NNTWGR 96
>ref|XP_004234345.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
[Solanum lycopersicum]
Length = 431
Score = 107 bits (267), Expect = 2e-21
Identities = 58/104 (55%), Positives = 68/104 (65%), Gaps = 12/104 (11%)
Frame = -3
Query: 301 MDVDGGRRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELP-------- 146
M++DG +RVF RLGPSS D +NNKQQKVCFHWR G+C RFPCPFLH ELP
Sbjct: 1 MEMDGSKRVFQRLGPSSQGDT-SNNKQQKVCFHWRAGRCNRFPCPFLHRELPGPPQQQQH 59
Query: 145 TAGNG----KRAHQGFGPEDNYRGGGGLRRSGNYNFSKNNTWGR 26
AGNG KR H GF ++ G G+RR+ N+ NNTWGR
Sbjct: 60 AAGNGMSSSKRPH-GFSDDNR---GSGMRRNPNF----NNTWGR 95
>gb|EOY23073.1| Zinc finger WD40 repeat protein 1 isoform 2 [Theobroma cacao]
Length = 320
Score = 97.8 bits (242), Expect = 2e-18
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Frame = -3
Query: 301 MDVDGG-RRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELPTAG---- 137
MD+DGG RRVF+RLG ST +++K QKVC+HWR GKC RFPCPFLH ELP G
Sbjct: 1 MDLDGGNRRVFNRLG-GPSTAPTDSSKHQKVCYHWRAGKCNRFPCPFLHRELPAPGPAAT 59
Query: 136 -NGKRAHQGFGPEDNYRGGGGLRRSGNYNFSKNNTWGRVQSQQPV 5
NG A + F + + G RR N+N + +N+WGR+ + + V
Sbjct: 60 ANGSGAPKRFADDSGF-SGPAARRGPNFNNNHHNSWGRMGANKVV 103
>gb|EOY23072.1| Zinc finger WD40 repeat protein 1 isoform 1 [Theobroma cacao]
Length = 447
Score = 97.8 bits (242), Expect = 2e-18
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Frame = -3
Query: 301 MDVDGG-RRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELPTAG---- 137
MD+DGG RRVF+RLG ST +++K QKVC+HWR GKC RFPCPFLH ELP G
Sbjct: 1 MDLDGGNRRVFNRLG-GPSTAPTDSSKHQKVCYHWRAGKCNRFPCPFLHRELPAPGPAAT 59
Query: 136 -NGKRAHQGFGPEDNYRGGGGLRRSGNYNFSKNNTWGRVQSQQPV 5
NG A + F + + G RR N+N + +N+WGR+ + + V
Sbjct: 60 ANGSGAPKRFADDSGF-SGPAARRGPNFNNNHHNSWGRMGANKVV 103
>ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ricinus communis]
gi|223549969|gb|EEF51456.1| F-box and wd40 domain
protein, putative [Ricinus communis]
Length = 445
Score = 90.9 bits (224), Expect = 2e-16
Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 16/109 (14%)
Frame = -3
Query: 301 MDVDGGR----RVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELP---- 146
+D GG RVF+RLG + + + N+ +QQKVC HWR G+C RFPCP+LH ELP
Sbjct: 3 LDAQGGNTNSNRVFNRLGGAQLSSSTNDPRQQKVCHHWRAGRCNRFPCPYLHRELPPPPP 62
Query: 145 --------TAGNGKRAHQGFGPEDNYRGGGGLRRSGNYNFSKNNTWGRV 23
++ N + +GF + + G G RRSGN+N ++WGRV
Sbjct: 63 PHGSNGHSSSNNNAPSKRGFSNDSGFSGPSGSRRSGNFN--NASSWGRV 109
>ref|XP_002318843.1| hypothetical protein POPTR_0012s13800g [Populus trichocarpa]
gi|222859516|gb|EEE97063.1| hypothetical protein
POPTR_0012s13800g [Populus trichocarpa]
Length = 452
Score = 87.8 bits (216), Expect = 2e-15
Identities = 50/114 (43%), Positives = 62/114 (54%), Gaps = 22/114 (19%)
Frame = -3
Query: 301 MDVDGG------RRVFHRLGPSSSTDNGNNN------KQQKVCFHWRQGKCTRFPCPFLH 158
+D +GG +RVFHRLG S ++ +N + QKVC+HWR GKC RFPCPFLH
Sbjct: 3 LDYNGGNTTNTNKRVFHRLGGGKSVNDTSNQHNHQHQQNQKVCYHWRAGKCNRFPCPFLH 62
Query: 157 SELPT----------AGNGKRAHQGFGPEDNYRGGGGLRRSGNYNFSKNNTWGR 26
ELP G G A +GF D+ G RR GN N+S N+WGR
Sbjct: 63 RELPAPPPHASVNGGGGGGGGAKRGFAGNDSSSFSG--RRGGNSNYS--NSWGR 112
>gb|EXC11889.1| Zinc finger CCCH domain-containing protein 48 [Morus notabilis]
Length = 456
Score = 84.3 bits (207), Expect = 2e-14
Identities = 55/108 (50%), Positives = 60/108 (55%), Gaps = 15/108 (13%)
Frame = -3
Query: 301 MDVDGG--RRVFHRL-------GPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSEL 149
MDVDGG +RVFHRL GPS STD N QKVCFHWR GKC RFPCP+LH EL
Sbjct: 1 MDVDGGGSKRVFHRLSGGAGGGGPSPSTDPRN----QKVCFHWRAGKCNRFPCPYLHREL 56
Query: 148 --PTAGNG----KRAHQGFGPEDNYRGGGGLRRSGNYNFSKNNTWGRV 23
P NG KR + GF +D RR N+TWGRV
Sbjct: 57 QPPPPQNGTASSKRQYHGFSGDDPEP-----RR------PNNSTWGRV 93
>ref|XP_004513686.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
[Cicer arietinum]
Length = 437
Score = 84.3 bits (207), Expect = 2e-14
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = -3
Query: 301 MDVDGG-RRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELPT-AGNGK 128
MD DGG +RV++RLG + G ++K QKVCF W+ GKC+R+PCPFLHSELP+ GNG
Sbjct: 1 MDFDGGNKRVYNRLGGPT----GGDSKNQKVCFQWQAGKCSRYPCPFLHSELPSFNGNGA 56
Query: 127 RAHQGFGPEDNYRGGGGLRRSGNYNFSKNNTWGR 26
+ + +G +N G R G +F NTWGR
Sbjct: 57 PSKRPYGSGENSSFSG---RRGGASF---NTWGR 84
>gb|ESW24345.1| hypothetical protein PHAVU_004G122600g [Phaseolus vulgaris]
Length = 424
Score = 84.0 bits (206), Expect = 3e-14
Identities = 47/98 (47%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Frame = -3
Query: 301 MDVDGG-RRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELPTA----- 140
MDVDGG +RV++RLG + K QKVCFHW+ GKC R+PCPFLHSELP +
Sbjct: 1 MDVDGGSKRVYNRLGGDA--------KHQKVCFHWQAGKCNRYPCPFLHSELPASSHANG 52
Query: 139 GNGKRAHQGFGPEDNYRGGGGLRRSGNYNFSKNNTWGR 26
+ KRAH G G G R N+ NN+WGR
Sbjct: 53 ASSKRAHDNSG----LSGFSGQRGRSNF----NNSWGR 82
>ref|XP_004308123.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
[Fragaria vesca subsp. vesca]
Length = 439
Score = 84.0 bits (206), Expect = 3e-14
Identities = 50/104 (48%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Frame = -3
Query: 301 MDVDGG--RRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELPT----- 143
MDV+GG +R+F+RLG + D NK QKVC+HWR GKC R PCP+LH ELP+
Sbjct: 1 MDVEGGGSKRIFNRLGGPAQPDP---NKNQKVCYHWRAGKCNRHPCPYLHRELPSPPSHG 57
Query: 142 ---AGNGKRAHQGFGPEDNYRGGGGLRRSGNYNFS--KNNTWGR 26
+ KR H GF N G G R G NFS +NTWGR
Sbjct: 58 LNGTASSKRQH-GFAA--NTDGPSGPRGRGPNNFSGGGSNTWGR 98
>gb|EMT32188.1| hypothetical protein F775_43820 [Aegilops tauschii]
Length = 151
Score = 83.2 bits (204), Expect = 5e-14
Identities = 43/92 (46%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = -3
Query: 289 GGRRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELPTAGNGKRAHQGF 110
G +RV +RLGP+ +++ KVC HWR G+C RFPCPFLHSELP A KR +Q
Sbjct: 10 GNKRVHNRLGPAPGA--ASSSSSTKVCIHWRAGRCNRFPCPFLHSELPEAATTKRPNQRD 67
Query: 109 GPED----NYRGGGGLRRSGNYNFSKNNTWGR 26
GP N GGG R G + N WGR
Sbjct: 68 GPGGHVWRNPNSGGGGRGGGGF-----NKWGR 94
>gb|EMS50999.1| Zinc finger CCCH domain-containing protein 17 [Triticum urartu]
Length = 677
Score = 83.2 bits (204), Expect = 5e-14
Identities = 43/92 (46%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = -3
Query: 289 GGRRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELPTAGNGKRAHQGF 110
G +RV +RLGP+ +++ KVC HWR G+C RFPCPFLHSELP A KR +Q
Sbjct: 10 GNKRVHNRLGPAPGA--ASSSSSTKVCIHWRAGRCNRFPCPFLHSELPEAATTKRPNQRD 67
Query: 109 GPED----NYRGGGGLRRSGNYNFSKNNTWGR 26
GP N GGG R G + N WGR
Sbjct: 68 GPGGHVWRNPNSGGGGRGGGGF-----NKWGR 94
>ref|XP_003548225.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
[Glycine max]
Length = 427
Score = 83.2 bits (204), Expect = 5e-14
Identities = 46/93 (49%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = -3
Query: 301 MDVDGG-RRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELPTAGNGKR 125
MDVDGG +RV++RLG + K QKVCFHW+ GKC R+PCPFLHSELP +
Sbjct: 1 MDVDGGNKRVYNRLGGDA--------KHQKVCFHWQAGKCNRYPCPFLHSELPANSHHAN 52
Query: 124 AHQGFGPEDNYRGGGGLRRSGNYNFSKNNTWGR 26
DN G G RRS ++ NNTWGR
Sbjct: 53 GASSKRAYDN-SGFSGPRRSPSF----NNTWGR 80
>dbj|BAJ90661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 433
Score = 83.2 bits (204), Expect = 5e-14
Identities = 43/93 (46%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Frame = -3
Query: 289 GGRRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELPTAGNGKRAHQGF 110
G +RV +RLGP+ +++ KVC HWR G+C RFPCPFLHSELP A KR +Q
Sbjct: 10 GNKRVHNRLGPAPGA--ASSSSSTKVCIHWRAGRCNRFPCPFLHSELPEAATTKRPNQRD 67
Query: 109 GP-----EDNYRGGGGLRRSGNYNFSKNNTWGR 26
GP + GGGG G Y N WGR
Sbjct: 68 GPGGHVWRNPNSGGGGRGGGGGY-----NKWGR 95
>dbj|BAJ93937.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 83.2 bits (204), Expect = 5e-14
Identities = 43/93 (46%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Frame = -3
Query: 289 GGRRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELPTAGNGKRAHQGF 110
G +RV +RLGP+ +++ KVC HWR G+C RFPCPFLHSELP A KR +Q
Sbjct: 10 GNKRVHNRLGPAPGA--ASSSSSTKVCIHWRAGRCNRFPCPFLHSELPEAATTKRPNQRD 67
Query: 109 GP-----EDNYRGGGGLRRSGNYNFSKNNTWGR 26
GP + GGGG G Y N WGR
Sbjct: 68 GPGGHVWRNPNSGGGGRGGGGGY-----NKWGR 95
>gb|EMJ19231.1| hypothetical protein PRUPE_ppa006002mg [Prunus persica]
Length = 433
Score = 82.4 bits (202), Expect = 8e-14
Identities = 48/107 (44%), Positives = 56/107 (52%), Gaps = 15/107 (14%)
Frame = -3
Query: 301 MDVDGG--RRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELPTAGN-- 134
MDVDGG +RVFHRLG S + +K QKVCFHWR GKC R PCPFLH ELP +
Sbjct: 1 MDVDGGGNKRVFHRLGGPQS----DPSKNQKVCFHWRAGKCNRHPCPFLHRELPPPPSQQ 56
Query: 133 ------GKRAHQGF-----GPEDNYRGGGGLRRSGNYNFSKNNTWGR 26
+ H F GP RG N+N ++TWGR
Sbjct: 57 GLNGTASSKRHHAFAATTDGPSARNRG------PNNFNGGASSTWGR 97
>ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
[Cucumis sativus] gi|449521989|ref|XP_004168011.1|
PREDICTED: zinc finger CCCH domain-containing protein
48-like [Cucumis sativus]
Length = 432
Score = 82.0 bits (201), Expect = 1e-13
Identities = 52/104 (50%), Positives = 62/104 (59%), Gaps = 11/104 (10%)
Frame = -3
Query: 301 MDVDGG-RRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSEL----PTAG 137
MDVDGG +RVF RLG S +++ QKVCFHWR GKC+R+PCP+LH EL A
Sbjct: 1 MDVDGGGKRVFQRLGAPSG-----DSRNQKVCFHWRAGKCSRYPCPYLHRELNGPPHAAS 55
Query: 136 NG------KRAHQGFGPEDNYRGGGGLRRSGNYNFSKNNTWGRV 23
NG KR H GF +D+ RRS NFS +TWGRV
Sbjct: 56 NGAANAASKRGH-GFASDDS--SVSVPRRSP--NFSGGSTWGRV 94
>ref|XP_003634083.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 48-like [Vitis vinifera]
Length = 249
Score = 81.6 bits (200), Expect = 1e-13
Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 14/107 (13%)
Frame = -3
Query: 301 MDVD--GGRRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELP------ 146
MDVD G +RVF RLG +S D+G KQQKVC+HWR G+C +FPCP+LH ELP
Sbjct: 1 MDVDEHGNKRVFQRLG--ASNDSG---KQQKVCYHWRAGRCNKFPCPYLHRELPAPPPEQ 55
Query: 145 ------TAGNGKRAHQGFGPEDNYRGGGGLRRSGNYNFSKNNTWGRV 23
+ KR +QG + R G RRS N+ N WGRV
Sbjct: 56 YQPFISNGSSSKRPNQGVHDD---RSFSGARRSPNF----NPAWGRV 95
>ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
[Glycine max]
Length = 426
Score = 81.6 bits (200), Expect = 1e-13
Identities = 45/93 (48%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Frame = -3
Query: 301 MDVDGG-RRVFHRLGPSSSTDNGNNNKQQKVCFHWRQGKCTRFPCPFLHSELPTAGNGKR 125
MDVDGG +RV++RLG + K QKVC+HW+ GKC R+PCPFLHSE P +
Sbjct: 1 MDVDGGNKRVYNRLGGDA--------KHQKVCYHWQAGKCNRYPCPFLHSESPANSHHAN 52
Query: 124 AHQGFGPEDNYRGGGGLRRSGNYNFSKNNTWGR 26
DN G G RRS N+ NNTWGR
Sbjct: 53 GTSSKRTYDN-SGFSGPRRSPNF----NNTWGR 80