BLASTX nr result
ID: Rehmannia23_contig00028312
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00028312
(544 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW04122.1| hypothetical protein PHAVU_011G069000g [Phaseolus... 65 8e-09
ref|XP_006340302.1| PREDICTED: putative pentatricopeptide repeat... 65 1e-08
ref|XP_004495883.1| PREDICTED: putative pentatricopeptide repeat... 62 7e-08
gb|EOX95372.1| Pentatricopeptide repeat superfamily protein isof... 62 9e-08
gb|EOX95371.1| Pentatricopeptide repeat superfamily protein isof... 62 9e-08
ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat... 62 9e-08
ref|XP_004295891.1| PREDICTED: putative pentatricopeptide repeat... 62 1e-07
ref|XP_002310039.2| hypothetical protein POPTR_0007s06780g [Popu... 61 2e-07
gb|EMJ24201.1| hypothetical protein PRUPE_ppa006785mg [Prunus pe... 60 3e-07
ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat... 60 3e-07
ref|XP_006492377.1| PREDICTED: putative pentatricopeptide repeat... 60 4e-07
ref|XP_003591356.1| Pentatricopeptide repeat-containing protein ... 59 1e-06
ref|XP_006444562.1| hypothetical protein CICLE_v10019795mg [Citr... 58 1e-06
gb|EMJ28026.1| hypothetical protein PRUPE_ppa017644mg, partial [... 58 1e-06
ref|XP_002515231.1| pentatricopeptide repeat-containing protein,... 58 1e-06
ref|XP_004251431.1| PREDICTED: putative pentatricopeptide repeat... 58 2e-06
ref|XP_003536858.1| PREDICTED: putative pentatricopeptide repeat... 57 3e-06
>gb|ESW04122.1| hypothetical protein PHAVU_011G069000g [Phaseolus vulgaris]
Length = 500
Score = 65.5 bits (158), Expect = 8e-09
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = -1
Query: 544 QKPSYVSFRRIKVLMELANKHEAISNLSEKMSSFGSANQMRKSYVDELDKPISDF 380
QKPS VSFRRIKVLMELAN+HEA+ +L++KMS FG Q+ +S V + + P S F
Sbjct: 443 QKPSNVSFRRIKVLMELANRHEALESLTQKMSIFGRPLQLHQSSVSQTETPDSLF 497
>ref|XP_006340302.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Solanum tuberosum]
Length = 505
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/57 (57%), Positives = 43/57 (75%)
Frame = -1
Query: 544 QKPSYVSFRRIKVLMELANKHEAISNLSEKMSSFGSANQMRKSYVDELDKPISDFIS 374
QKPS VSFRRIKVLMELANK E + LSEKM++FGS+ Q+ + E ++ SDF++
Sbjct: 449 QKPSNVSFRRIKVLMELANKQETLKLLSEKMAAFGSSTQLIQHDKAEYEQSSSDFVT 505
>ref|XP_004495883.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cicer arietinum]
Length = 502
Score = 62.4 bits (150), Expect = 7e-08
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = -1
Query: 544 QKPSYVSFRRIKVLMELANKHEAISNLSEKMSSFGSANQMRKS 416
QKPS VSFRRIKVLMELAN+HEAI NL++KM FG Q+R++
Sbjct: 443 QKPSNVSFRRIKVLMELANRHEAIQNLTQKMGVFGQTLQVREN 485
>gb|EOX95372.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
cacao]
Length = 279
Score = 62.0 bits (149), Expect = 9e-08
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = -1
Query: 541 KPSYVSFRRIKVLMELANKHEAISNLSEKMSSFGSANQM 425
KPS VSFRRIKVLMELANKHEA+ NL EKM+ FGS+ Q+
Sbjct: 217 KPSNVSFRRIKVLMELANKHEAVKNLKEKMAVFGSSIQL 255
>gb|EOX95371.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao]
Length = 511
Score = 62.0 bits (149), Expect = 9e-08
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = -1
Query: 541 KPSYVSFRRIKVLMELANKHEAISNLSEKMSSFGSANQM 425
KPS VSFRRIKVLMELANKHEA+ NL EKM+ FGS+ Q+
Sbjct: 449 KPSNVSFRRIKVLMELANKHEAVKNLKEKMAVFGSSIQL 487
>ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Vitis vinifera]
Length = 526
Score = 62.0 bits (149), Expect = 9e-08
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = -1
Query: 541 KPSYVSFRRIKVLMELANKHEAISNLSEKMSSFGSANQMRK 419
KPS VSFRRIKVLMELANKHEA+ NL+EKM+ FG + Q+++
Sbjct: 470 KPSNVSFRRIKVLMELANKHEALQNLTEKMAMFGPSTQVQE 510
>ref|XP_004295891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Fragaria vesca subsp. vesca]
Length = 504
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = -1
Query: 541 KPSYVSFRRIKVLMELANKHEAISNLSEKMSSFGSANQMRKSYVDELDKPISDFIS 374
KPS VSFRRIKVLMELANKHEA+ NL+EKM+ FGS+ + +S P S+ ++
Sbjct: 449 KPSNVSFRRIKVLMELANKHEALKNLTEKMALFGSSIHLPESMDRSTVVPCSEALA 504
>ref|XP_002310039.2| hypothetical protein POPTR_0007s06780g [Populus trichocarpa]
gi|550334290|gb|EEE90489.2| hypothetical protein
POPTR_0007s06780g [Populus trichocarpa]
Length = 509
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = -1
Query: 541 KPSYVSFRRIKVLMELANKHEAISNLSEKMSSFGSA 434
KPS VSFRRIKVLMELANKH+AI NLSEKM+ FGS+
Sbjct: 455 KPSNVSFRRIKVLMELANKHDAIRNLSEKMAIFGSS 490
>gb|EMJ24201.1| hypothetical protein PRUPE_ppa006785mg [Prunus persica]
Length = 395
Score = 60.5 bits (145), Expect = 3e-07
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = -1
Query: 541 KPSYVSFRRIKVLMELANKHEAISNLSEKMSSFGSA 434
KPS VSFRRIKVLMELANKHEA+ NL+EKM+ FGS+
Sbjct: 339 KPSNVSFRRIKVLMELANKHEALKNLTEKMAVFGSS 374
>ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Glycine max]
Length = 500
Score = 60.5 bits (145), Expect = 3e-07
Identities = 31/55 (56%), Positives = 41/55 (74%)
Frame = -1
Query: 544 QKPSYVSFRRIKVLMELANKHEAISNLSEKMSSFGSANQMRKSYVDELDKPISDF 380
QKPS+VSFRRIKVLMELAN+HEA+ +L +KM+ FG Q+ +S V+ + S F
Sbjct: 443 QKPSHVSFRRIKVLMELANRHEALQSLMQKMAMFGRPLQVDQSTVNPAETSDSLF 497
>ref|XP_006492377.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Citrus sinensis]
Length = 506
Score = 59.7 bits (143), Expect = 4e-07
Identities = 35/58 (60%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -1
Query: 541 KPSYVSFRRIKVLMELANKHEAISNLSEKMSSFG-SANQMRKSYVDELDKPISDFISC 371
KPS VSFRRIKVLMELANK EA+ NLS KM+ FG S R+ Y+ E+ SD SC
Sbjct: 451 KPSQVSFRRIKVLMELANKQEALQNLSNKMALFGPSMIPKREEYLAEMS--ASDSFSC 506
>ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 518
Score = 58.5 bits (140), Expect = 1e-06
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = -1
Query: 544 QKPSYVSFRRIKVLMELANKHEAISNLSEKMSSFGSANQMRK 419
Q+PS VSF+RIKVLMELANKHEAI NL++KM+ FG Q+ +
Sbjct: 437 QRPSNVSFKRIKVLMELANKHEAIQNLTQKMAIFGRPLQVHE 478
>ref|XP_006444562.1| hypothetical protein CICLE_v10019795mg [Citrus clementina]
gi|557546824|gb|ESR57802.1| hypothetical protein
CICLE_v10019795mg [Citrus clementina]
Length = 506
Score = 58.2 bits (139), Expect = 1e-06
Identities = 34/58 (58%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -1
Query: 541 KPSYVSFRRIKVLMELANKHEAISNLSEKMSSFG-SANQMRKSYVDELDKPISDFISC 371
KPS VSFRRIK LMELANK EA+ NLS KM+ FG S R+ Y+ E+ SD SC
Sbjct: 451 KPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEYLAEMS--ASDSFSC 506
>gb|EMJ28026.1| hypothetical protein PRUPE_ppa017644mg, partial [Prunus persica]
Length = 351
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = -1
Query: 541 KPSYVSFRRIKVLMELANKHEAISNLSEKMSSFGSA 434
KPS VSFR IKVLMELANKHEA+ NL+EKM+ FGS+
Sbjct: 299 KPSNVSFRMIKVLMELANKHEALKNLTEKMAVFGSS 334
>ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545711|gb|EEF47215.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 505
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Frame = -1
Query: 541 KPSYVSFRRIKVLMELANKHEAISNLSEKMSSFGSANQM--------RKSYVDEL 401
KPS VSFRRIKVLMEL NKH+A+ NL +KM+ FGS+ Q+ SY+D L
Sbjct: 449 KPSNVSFRRIKVLMELVNKHDALLNLQKKMAIFGSSIQLPEREEHLNETSYIDSL 503
>ref|XP_004251431.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Solanum lycopersicum]
Length = 500
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = -1
Query: 544 QKPSYVSFRRIKVLMELANKHEAISNLSEKMSSFGSANQM 425
QKPS VSFRRIKVLMELANK EA+ LSEKM++F S+ Q+
Sbjct: 449 QKPSNVSFRRIKVLMELANKQEALKLLSEKMAAFRSSTQL 488
>ref|XP_003536858.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Glycine max]
Length = 279
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = -1
Query: 544 QKPSYVSFRRIKVLMELANKHEAISNLSEKMSSFGSANQMR 422
QKPS+VSFRRIKVLMELAN+HEA+ +L++KM+ F Q+R
Sbjct: 239 QKPSHVSFRRIKVLMELANRHEALQSLTQKMAIFRRPLQVR 279