BLASTX nr result

ID: Rehmannia23_contig00028277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00028277
         (579 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004242860.1| PREDICTED: F-box/kelch-repeat protein At3g27...    84   3e-14
ref|XP_006359067.1| PREDICTED: F-box/kelch-repeat protein At3g27...    80   4e-13
ref|XP_004145670.1| PREDICTED: F-box/kelch-repeat protein At3g27...    59   9e-07
ref|XP_003525748.1| PREDICTED: F-box/kelch-repeat protein At3g27...    57   3e-06
ref|XP_006373225.1| hypothetical protein POPTR_0017s09870g [Popu...    56   8e-06
ref|XP_002328886.1| f-box family protein [Populus trichocarpa]         56   8e-06
ref|XP_003553251.2| PREDICTED: F-box/kelch-repeat protein At3g27...    55   1e-05

>ref|XP_004242860.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like isoform 1
           [Solanum lycopersicum] gi|460394541|ref|XP_004242861.1|
           PREDICTED: F-box/kelch-repeat protein At3g27150-like
           isoform 2 [Solanum lycopersicum]
          Length = 417

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
 Frame = +1

Query: 337 YNDWITLGPSSPKRIRMS-------ENGEEKPQDADXXXXXXXXXXXIFARLPRSEHWKL 495
           Y DW+T    S K++R+S       EN + +PQDAD           I AR PR E+WKL
Sbjct: 33  YGDWVTFKSHSSKKVRISRPESSRGENSDRQPQDADYPSLSYELESEILARFPRWEYWKL 92

Query: 496 SSVSKACSTLLKTGDLYNIRREIGFTEP 579
           S V+K CSTLLK+G+++ IR+E GF EP
Sbjct: 93  SLVNKRCSTLLKSGEIFEIRKENGFREP 120


>ref|XP_006359067.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Solanum
           tuberosum]
          Length = 417

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
 Frame = +1

Query: 337 YNDWITLGPSSPKRIRMS-------ENGEEKPQDADXXXXXXXXXXXIFARLPRSEHWKL 495
           Y DW+T    S K++R+S       EN + +PQDAD           I +R PR E+WKL
Sbjct: 33  YGDWVTFKSHSSKKVRISRPESPRGENSDRQPQDADYPSLSYELESEILSRFPRWEYWKL 92

Query: 496 SSVSKACSTLLKTGDLYNIRREIGFTEP 579
           S V+K CS LLK+G+++ IR+E GF EP
Sbjct: 93  SLVNKRCSMLLKSGEIFEIRKENGFKEP 120


>ref|XP_004145670.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Cucumis
           sativus] gi|449502024|ref|XP_004161522.1| PREDICTED:
           F-box/kelch-repeat protein At3g27150-like [Cucumis
           sativus]
          Length = 422

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 36/76 (47%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
 Frame = +1

Query: 364 SSPKRIRMSENGEE---KPQDADXXXXXXXXXXX--IFARLPRSEHWKLSSVSKACSTLL 528
           S P+ IR    GE    KPQDAD             I AR P+SE WKLS VSK   TL+
Sbjct: 38  SPPRFIRDCGVGESSGLKPQDADYSIPLFGDELELSILARFPQSEQWKLSCVSKRYLTLV 97

Query: 529 KTGDLYNIRREIGFTE 576
           ++G+LY IR+EIG+ E
Sbjct: 98  RSGELYRIRKEIGYQE 113


>ref|XP_003525748.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Glycine max]
          Length = 394

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
 Frame = +1

Query: 367 SPKRIRMSENGEEKPQDADXXXXXXXXXXX--IFARLPRSEHWKLSSVSKACSTLLKTGD 540
           SP     S +  ++PQDAD             I AR P  +HWK+  +SK   TLLK+G+
Sbjct: 26  SPSYAHGSSSAGQEPQDADYDVPCLSDELETMILARFPIPKHWKMCCLSKRFLTLLKSGE 85

Query: 541 LYNIRREIGFTEP 579
           +Y IRR IGF EP
Sbjct: 86  IYKIRRVIGFKEP 98


>ref|XP_006373225.1| hypothetical protein POPTR_0017s09870g [Populus trichocarpa]
           gi|550319931|gb|ERP51022.1| hypothetical protein
           POPTR_0017s09870g [Populus trichocarpa]
          Length = 434

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
 Frame = +1

Query: 382 RMSENGEEKPQDADXXXXXXXXXXX---IFARLPRSEHWKLSSVSKACSTLLKTGDLYNI 552
           R  ++   +PQDAD              I AR+PRSE+WK   V+K   +L+K+G+L NI
Sbjct: 70  RAGDSSSVEPQDADYSYVPQLCDELENQILARVPRSEYWKFRIVNKRILSLVKSGELLNI 129

Query: 553 RREIGFTE 576
           RREIGF E
Sbjct: 130 RREIGFRE 137


>ref|XP_002328886.1| f-box family protein [Populus trichocarpa]
          Length = 389

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
 Frame = +1

Query: 382 RMSENGEEKPQDADXXXXXXXXXXX---IFARLPRSEHWKLSSVSKACSTLLKTGDLYNI 552
           R  ++   +PQDAD              I AR+PRSE+WK   V+K   +L+K+G+L NI
Sbjct: 25  RAGDSSSVEPQDADYSYVPQLCDELENQILARVPRSEYWKFRIVNKRILSLVKSGELLNI 84

Query: 553 RREIGFTE 576
           RREIGF E
Sbjct: 85  RREIGFRE 92


>ref|XP_003553251.2| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Glycine max]
          Length = 401

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
 Frame = +1

Query: 364 SSPKRIRMSE------NG------EEKPQDADXXXXXXXXXXX---IFARLPRSEHWKLS 498
           SS K++R+ E      NG      E  PQDAD              I AR PRS+HWKL 
Sbjct: 22  SSQKKMRVRELSPSDGNGSSTNEDEPLPQDADYINVLSLSDELETSILARFPRSQHWKLC 81

Query: 499 SVSKACSTLLKTGDLYNIRREIGFTEP 579
            ++K    L ++G++Y IRRE+GF EP
Sbjct: 82  FLNKRFLALSRSGEIYKIRRELGFKEP 108


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