BLASTX nr result
ID: Rehmannia23_contig00028154
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00028154
(534 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY15135.1| Pentatricopeptide repeat (PPR) superfamily protei... 145 6e-33
ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containi... 141 8e-32
ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containi... 137 2e-30
emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera] 137 2e-30
gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis] 135 6e-30
ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containi... 135 6e-30
ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containi... 134 1e-29
ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citr... 134 1e-29
ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-29
ref|XP_002339343.1| predicted protein [Populus trichocarpa] 128 7e-28
ref|XP_002336862.1| predicted protein [Populus trichocarpa] 127 1e-27
ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Popu... 127 2e-27
ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containi... 125 6e-27
ref|XP_002523825.1| pentatricopeptide repeat-containing protein,... 125 8e-27
gb|ESW08118.1| hypothetical protein PHAVU_009G019800g [Phaseolus... 124 1e-26
gb|EPS73405.1| hypothetical protein M569_01350, partial [Genlise... 122 4e-26
ref|XP_003603831.1| Pentatricopeptide repeat-containing protein ... 122 4e-26
ref|NP_564110.1| pentatricopeptide repeat-containing protein [Ar... 121 1e-25
ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Caps... 119 4e-25
ref|XP_002890377.1| pentatricopeptide repeat-containing protein ... 118 7e-25
>gb|EOY15135.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 532
Score = 145 bits (366), Expect = 6e-33
Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 1/171 (0%)
Frame = +2
Query: 23 ISLICRNTVNLYSSSSAAIVLQNDIVTGEESDERSPAPVPA-AKLSADETLIANNFYSLI 199
IS + + LYSS+ ++ G+ES+E + + P A LS +E +A F+SLI
Sbjct: 14 ISPLSQRFFKLYSSTPTSL-------RGDESEETNMSEKPKIAALSPEEAEVAEKFHSLI 66
Query: 200 KDHHRXXXXXXXXXXXXXXXXVAFPSLSFDFSNISPVQSLSPAVARHVIEKCAAPRHGIP 379
KDHHR PSLS DFS IS V S+SP++ RHVI+KC RHGIP
Sbjct: 67 KDHHRKNPNPDLNSAPPTPDFT-IPSLSLDFSKISAVHSISPSLVRHVIDKCGGVRHGIP 125
Query: 380 YPQTLAFFNWATSRLEPSLSLELFNEMIDLSGKVRQFDVAWHLIDSMKSQN 532
+ QTL+FFNWAT+R + + S + +NEMIDL+GK+R FD+AWHLID MK++N
Sbjct: 126 FLQTLSFFNWATTRPDFASSPDPYNEMIDLAGKLRHFDLAWHLIDLMKAKN 176
>ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Solanum lycopersicum]
Length = 543
Score = 141 bits (356), Expect = 8e-32
Identities = 81/160 (50%), Positives = 99/160 (61%), Gaps = 2/160 (1%)
Frame = +2
Query: 59 SSSSAAIVLQNDIVTGEESDERSPAPVPAAKLSADETLIANNFYSLIKDHHRXXXXXXXX 238
S S++ I L D+ G+ DE LS +E IA F+SLIKDHHR
Sbjct: 31 SVSTSEIALCGDV--GDGKDENGGPICRTEVLSKEEAQIAEKFHSLIKDHHRKNPTATPT 88
Query: 239 XXXXXXXXVAFPSLSFDFSNISPVQSLSPAVARHVIEKCAAPRHGIPYPQTLAFFNWATS 418
+ FP+LSFDFS+IS +S+SP V VIEKC + RHGIP+ Q LAFFNWA +
Sbjct: 89 SIPLNPN-ITFPTLSFDFSSISDNRSISPPVVSRVIEKCGSVRHGIPFSQALAFFNWAAA 147
Query: 419 R--LEPSLSLELFNEMIDLSGKVRQFDVAWHLIDSMKSQN 532
R L+ E +NEMIDL+GKVRQFDVAWHLIDSMK +N
Sbjct: 148 RDSCGSFLNPEPYNEMIDLAGKVRQFDVAWHLIDSMKLKN 187
>ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 137 bits (345), Expect = 2e-30
Identities = 82/172 (47%), Positives = 101/172 (58%), Gaps = 2/172 (1%)
Frame = +2
Query: 23 ISLICRNTVNLYSSSSAAIVLQNDIVTGEESDERSPAPVPAAK--LSADETLIANNFYSL 196
+S + +++ LYSSSS A EE DE + A LS++ETL+ F+SL
Sbjct: 17 LSPVSQHSFRLYSSSSEA---------SEEEDEVKESGNSAVNIVLSSEETLVVEKFHSL 67
Query: 197 IKDHHRXXXXXXXXXXXXXXXXVAFPSLSFDFSNISPVQSLSPAVARHVIEKCAAPRHGI 376
IK H R SLSFDFS IS S+S A+ R VIEKC RHGI
Sbjct: 68 IKSHQRKNTNPDPISPNPHY---TIASLSFDFSQISSADSVSSAIVRRVIEKCGGVRHGI 124
Query: 377 PYPQTLAFFNWATSRLEPSLSLELFNEMIDLSGKVRQFDVAWHLIDSMKSQN 532
P+PQTLAFFNWAT+ E S E + EMIDL+GKVRQFD+AW LID MK++N
Sbjct: 125 PFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRN 176
>emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 137 bits (345), Expect = 2e-30
Identities = 82/172 (47%), Positives = 101/172 (58%), Gaps = 2/172 (1%)
Frame = +2
Query: 23 ISLICRNTVNLYSSSSAAIVLQNDIVTGEESDERSPAPVPAAK--LSADETLIANNFYSL 196
+S + +++ LYSSSS A EE DE + A LS++ETL+ F+SL
Sbjct: 1049 LSPVSQHSFRLYSSSSEA---------SEEEDEVKESGNSAVNIVLSSEETLVVEKFHSL 1099
Query: 197 IKDHHRXXXXXXXXXXXXXXXXVAFPSLSFDFSNISPVQSLSPAVARHVIEKCAAPRHGI 376
IK H R SLSFDFS IS S+S A+ R VIEKC RHGI
Sbjct: 1100 IKSHQRKNTNPDPISPNPHY---TIASLSFDFSQISSADSVSSAIVRRVIEKCGGVRHGI 1156
Query: 377 PYPQTLAFFNWATSRLEPSLSLELFNEMIDLSGKVRQFDVAWHLIDSMKSQN 532
P+PQTLAFFNWAT+ E S E + EMIDL+GKVRQFD+AW LID MK++N
Sbjct: 1157 PFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRN 1208
>gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]
Length = 535
Score = 135 bits (340), Expect = 6e-30
Identities = 76/159 (47%), Positives = 97/159 (61%)
Frame = +2
Query: 56 YSSSSAAIVLQNDIVTGEESDERSPAPVPAAKLSADETLIANNFYSLIKDHHRXXXXXXX 235
+SSSS A + + D +D P ++ LS +ETLIA+ +SLIK HHR
Sbjct: 28 FSSSSEAHLSEEDT-----NDNPQTGPT-SSSLSPEETLIADKLHSLIKGHHRKNPSPDS 81
Query: 236 XXXXXXXXXVAFPSLSFDFSNISPVQSLSPAVARHVIEKCAAPRHGIPYPQTLAFFNWAT 415
PSLS DFS IS V SLSP + R VIEKC RHGIP Q LAFFNWAT
Sbjct: 82 NPSPPNPNFT-IPSLSLDFSQISAVHSLSPGIVRRVIEKCGGVRHGIPVLQALAFFNWAT 140
Query: 416 SRLEPSLSLELFNEMIDLSGKVRQFDVAWHLIDSMKSQN 532
++ S E +NE++DL+GKVRQFD+AWH++D MK++N
Sbjct: 141 AQDRLGQSPEPYNELVDLAGKVRQFDLAWHVLDLMKTRN 179
>ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 529
Score = 135 bits (340), Expect = 6e-30
Identities = 81/171 (47%), Positives = 101/171 (59%)
Frame = +2
Query: 20 FISLICRNTVNLYSSSSAAIVLQNDIVTGEESDERSPAPVPAAKLSADETLIANNFYSLI 199
F+S + + +N S SSA D E+D AP +ETLIA+ F+SLI
Sbjct: 14 FLSPLSQRLLNPSSFSSAPEPHLQD-----ENDTSQTAPT-------EETLIADTFHSLI 61
Query: 200 KDHHRXXXXXXXXXXXXXXXXVAFPSLSFDFSNISPVQSLSPAVARHVIEKCAAPRHGIP 379
KDHHR PSLS DFS +S S+SPAV R V+EKC A RHGIP
Sbjct: 62 KDHHRNNPNPNPNPAPPNPTYT-IPSLSSDFSQLSAAGSVSPAVVRRVLEKCGAVRHGIP 120
Query: 380 YPQTLAFFNWATSRLEPSLSLELFNEMIDLSGKVRQFDVAWHLIDSMKSQN 532
Q +AFFNWATSR + E +NEM+DL+GKVRQFD+AWH+ID MK++N
Sbjct: 121 VLQAVAFFNWATSREGFEHNPEPYNEMVDLAGKVRQFDLAWHVIDLMKARN 171
>ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Citrus sinensis]
Length = 538
Score = 134 bits (337), Expect = 1e-29
Identities = 73/147 (49%), Positives = 88/147 (59%)
Frame = +2
Query: 92 DIVTGEESDERSPAPVPAAKLSADETLIANNFYSLIKDHHRXXXXXXXXXXXXXXXXVAF 271
D VT S +P LS +ETLI+ F+SLIKDHHR
Sbjct: 42 DCVTNPNSSPDTPF------LSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTI 95
Query: 272 PSLSFDFSNISPVQSLSPAVARHVIEKCAAPRHGIPYPQTLAFFNWATSRLEPSLSLELF 451
PSLS FS IS S+SP+ RHVIEK RHGIP Q L+FFNW T+R E S +L+
Sbjct: 96 PSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY 155
Query: 452 NEMIDLSGKVRQFDVAWHLIDSMKSQN 532
+EMI+L+GKVRQFD+AWH ID MKS+N
Sbjct: 156 HEMINLAGKVRQFDLAWHFIDLMKSRN 182
>ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citrus clementina]
gi|557537379|gb|ESR48497.1| hypothetical protein
CICLE_v10000789mg [Citrus clementina]
Length = 541
Score = 134 bits (337), Expect = 1e-29
Identities = 73/147 (49%), Positives = 88/147 (59%)
Frame = +2
Query: 92 DIVTGEESDERSPAPVPAAKLSADETLIANNFYSLIKDHHRXXXXXXXXXXXXXXXXVAF 271
D VT S +P LS +ETLI+ F+SLIKDHHR
Sbjct: 45 DCVTNPNSSPDTPF------LSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTI 98
Query: 272 PSLSFDFSNISPVQSLSPAVARHVIEKCAAPRHGIPYPQTLAFFNWATSRLEPSLSLELF 451
PSLS FS IS S+SP+ RHVIEK RHGIP Q L+FFNW T+R E S +L+
Sbjct: 99 PSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY 158
Query: 452 NEMIDLSGKVRQFDVAWHLIDSMKSQN 532
+EMI+L+GKVRQFD+AWH ID MKS+N
Sbjct: 159 HEMINLAGKVRQFDLAWHFIDLMKSRN 185
>ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Solanum tuberosum]
Length = 549
Score = 133 bits (335), Expect = 2e-29
Identities = 75/145 (51%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Frame = +2
Query: 104 GEESDERSPAPVPAAKLSADETLIANNFYSLIKDHHRXXXXXXXXXXXXXXXXVAFPSLS 283
GE E LS +E IA +SLIKDHHR + FP+LS
Sbjct: 50 GEGEGENGGPICRTEVLSEEEAQIAEKIHSLIKDHHRKNPTATPTSIPLNPN-ITFPTLS 108
Query: 284 FDFSNISPVQSLSPAVARHVIEKCAAPRHGIPYPQTLAFFNWATSR--LEPSLSLELFNE 457
FDFS+IS +S+SP V VIEKC + RHGIP+ Q LAFFNWA R L+ E +NE
Sbjct: 109 FDFSSISDNRSISPPVVSRVIEKCGSVRHGIPFSQALAFFNWAAVRDSCGSFLNPEPYNE 168
Query: 458 MIDLSGKVRQFDVAWHLIDSMKSQN 532
MIDL+GKVRQFDVAWHLIDSMK +N
Sbjct: 169 MIDLAGKVRQFDVAWHLIDSMKLKN 193
>ref|XP_002339343.1| predicted protein [Populus trichocarpa]
Length = 190
Score = 128 bits (322), Expect = 7e-28
Identities = 74/173 (42%), Positives = 94/173 (54%), Gaps = 1/173 (0%)
Frame = +2
Query: 14 LNFISLICRNTVNLYSSSSAAIVLQNDIVTGEESDERSPAPVPAAKLSADETLIANNFYS 193
L F + + + +SSS N + DE P LS +ET +A +S
Sbjct: 8 LRFPHSLSPHLIKPFSSSPLTTSDSNLLEDDSNDDEEHTIKTPKTPLSPEETSVAEKLHS 67
Query: 194 LIKDHHRXXXXXXXXXXXXXXXXVAFPSLSFDFSN-ISPVQSLSPAVARHVIEKCAAPRH 370
LIKDH+R PSLS DFS IS V S+SP++ RHVIE+ RH
Sbjct: 68 LIKDHYRNNPNKTLPPDPTY----TIPSLSLDFSQTISTVHSISPSIIRHVIEQSGGVRH 123
Query: 371 GIPYPQTLAFFNWATSRLEPSLSLELFNEMIDLSGKVRQFDVAWHLIDSMKSQ 529
GIP PQ LAFFNWA+ + S E FNEM+D SGKVR FD+AWH+ID MK++
Sbjct: 124 GIPVPQVLAFFNWASYQDGFDKSPEAFNEMVDFSGKVRMFDLAWHVIDLMKAR 176
>ref|XP_002336862.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 127 bits (320), Expect = 1e-27
Identities = 73/174 (41%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
Frame = +2
Query: 14 LNFISLICRNTVNLYSSSSAAIVLQNDIVTGEESDERSPAPVPAAKLSADETLIANNFYS 193
L F + + + +SSS N + DE P LS +ET +A +S
Sbjct: 8 LRFPHSLSPHLLKPFSSSPLTTSDSNLLEDDSNDDEEHTIKTPKTPLSPEETFVAEKLHS 67
Query: 194 LIKDHHRXXXXXXXXXXXXXXXXVAFPSLSFDFSN-ISPVQSLSPAVARHVIEKCAAPRH 370
LIKDH+R PSLS DFS IS V S+SP++ RHVIE+ RH
Sbjct: 68 LIKDHYRNNPNKTLPPDPTY----TIPSLSLDFSQTISTVHSISPSIIRHVIEQSGGVRH 123
Query: 371 GIPYPQTLAFFNWATSRLEPSLSLELFNEMIDLSGKVRQFDVAWHLIDSMKSQN 532
GIP PQ LAFFNWA+ + S E FNEM+D +GKVR FD+AWH+ID MK+++
Sbjct: 124 GIPVPQVLAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARD 177
>ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Populus trichocarpa]
gi|550339796|gb|EEE94747.2| hypothetical protein
POPTR_0005s26670g [Populus trichocarpa]
Length = 533
Score = 127 bits (318), Expect = 2e-27
Identities = 73/174 (41%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
Frame = +2
Query: 14 LNFISLICRNTVNLYSSSSAAIVLQNDIVTGEESDERSPAPVPAAKLSADETLIANNFYS 193
L F + + + +SSS N + DE P LS +ET +A +S
Sbjct: 8 LRFPHSLSPHLLKPFSSSPLTTSDSNLLEDDSNDDEEHTIKTPKTPLSPEETSVAEKLHS 67
Query: 194 LIKDHHRXXXXXXXXXXXXXXXXVAFPSLSFDFSN-ISPVQSLSPAVARHVIEKCAAPRH 370
LIKDH+R PSLS DFS IS V S+SP++ RHVIE+ RH
Sbjct: 68 LIKDHYRNNPNKTLPPDPTY----TIPSLSLDFSQTISTVHSISPSIIRHVIEQSGGVRH 123
Query: 371 GIPYPQTLAFFNWATSRLEPSLSLELFNEMIDLSGKVRQFDVAWHLIDSMKSQN 532
GIP PQ LAFFNWA+ + S E FNEM+D +GKVR FD+AWH+ID MK+++
Sbjct: 124 GIPVPQVLAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARD 177
>ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like isoform X1 [Glycine max]
gi|571458531|ref|XP_006581147.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like isoform X2 [Glycine max]
Length = 564
Score = 125 bits (314), Expect = 6e-27
Identities = 74/176 (42%), Positives = 101/176 (57%)
Frame = +2
Query: 2 SNRSLNFISLICRNTVNLYSSSSAAIVLQNDIVTGEESDERSPAPVPAAKLSADETLIAN 181
S R + +S + T YSSS++A+V + DI P LS +ET +A+
Sbjct: 42 SARFRHSLSPLLSPTFKPYSSSASALVPELDI---------QPDTPQNPNLSPEETTLAD 92
Query: 182 NFYSLIKDHHRXXXXXXXXXXXXXXXXVAFPSLSFDFSNISPVQSLSPAVARHVIEKCAA 361
F++ IK+HHR + P LS FS IS +SP+VA VIEKC
Sbjct: 93 KFHAAIKEHHRRNPTPNPNAPPPTPN-LTIPDLSLAFSAISAAHPISPSVAHRVIEKCGG 151
Query: 362 PRHGIPYPQTLAFFNWATSRLEPSLSLELFNEMIDLSGKVRQFDVAWHLIDSMKSQ 529
RHGIP+ Q+LAFFNW++S S E +NEM+DL+GK+RQFD+AWH+ID MKS+
Sbjct: 152 VRHGIPFLQSLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSR 207
>ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536913|gb|EEF38551.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 528
Score = 125 bits (313), Expect = 8e-27
Identities = 75/158 (47%), Positives = 98/158 (62%)
Frame = +2
Query: 59 SSSSAAIVLQNDIVTGEESDERSPAPVPAAKLSADETLIANNFYSLIKDHHRXXXXXXXX 238
SSSS++I+ Q+ + E D +P+ LS +ET +AN F+SLIKDHHR
Sbjct: 32 SSSSSSIISQSQHL---EEDYINPS------LSFEETTLANKFHSLIKDHHRRNPNFSLP 82
Query: 239 XXXXXXXXVAFPSLSFDFSNISPVQSLSPAVARHVIEKCAAPRHGIPYPQTLAFFNWATS 418
SLS DFS+ S +SP++ HVIEKCAA RHGIP+ Q L+FFNWATS
Sbjct: 83 NTPSH-------SLSLDFSHFS-TSPVSPSLVSHVIEKCAAVRHGIPFFQALSFFNWATS 134
Query: 419 RLEPSLSLELFNEMIDLSGKVRQFDVAWHLIDSMKSQN 532
R + E +NEMIDL+GKVR FD+ W +ID MK++N
Sbjct: 135 RPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARN 172
>gb|ESW08118.1| hypothetical protein PHAVU_009G019800g [Phaseolus vulgaris]
Length = 530
Score = 124 bits (311), Expect = 1e-26
Identities = 66/126 (52%), Positives = 84/126 (66%)
Frame = +2
Query: 152 LSADETLIANNFYSLIKDHHRXXXXXXXXXXXXXXXXVAFPSLSFDFSNISPVQSLSPAV 331
LS +ET +A+ ++ IKDHHR +A P LS DFS +S Q+LSPAV
Sbjct: 49 LSPEETTLADKLHAAIKDHHRRNPSPNPNAAPPTPN-LAIPDLSLDFSALSAAQTLSPAV 107
Query: 332 ARHVIEKCAAPRHGIPYPQTLAFFNWATSRLEPSLSLELFNEMIDLSGKVRQFDVAWHLI 511
AR VIEKC A RHGIP Q+LAFFNWATS S E ++EM+DL+GK+R FD+AWH+I
Sbjct: 108 ARRVIEKCGAVRHGIPLFQSLAFFNWATSLDGFPPSPEPYDEMLDLAGKLRHFDLAWHVI 167
Query: 512 DSMKSQ 529
D MK++
Sbjct: 168 DLMKTR 173
>gb|EPS73405.1| hypothetical protein M569_01350, partial [Genlisea aurea]
Length = 509
Score = 122 bits (307), Expect = 4e-26
Identities = 73/166 (43%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Frame = +2
Query: 38 RNTVNLYSSSSAAIVLQNDIVTGEESDERSPAPVPAAKLSADETLIANNFYSLIKDHHRX 217
R + L+SS+S+AI + ++ P+ + +SA E LI+ FY IKD +
Sbjct: 10 RRSTALHSSTSSAIDCEGEVAV--------PSEIGVGDISAAEGLISEKFYLEIKDRYLR 61
Query: 218 XXXXXXXXXXXXXXXVAFPSLSFDFSNISPVQSLSPAVARHVIEKCAAPRHGIPYPQTLA 397
DFSNI LSPAV R VI+KCAAPRHGIP+ QTLA
Sbjct: 62 NSNSPLRLDVS------------DFSNILSDHPLSPAVIRRVIKKCAAPRHGIPFLQTLA 109
Query: 398 FFNWATSRLEPSLSL-ELFNEMIDLSGKVRQFDVAWHLIDSMKSQN 532
FF W+ +L + +L EL+NEMIDL GKVR F++AW LIDSMK QN
Sbjct: 110 FFKWSVPKLNQANALPELYNEMIDLCGKVRDFEIAWQLIDSMKCQN 155
>ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 530
Score = 122 bits (307), Expect = 4e-26
Identities = 64/145 (44%), Positives = 93/145 (64%)
Frame = +2
Query: 95 IVTGEESDERSPAPVPAAKLSADETLIANNFYSLIKDHHRXXXXXXXXXXXXXXXXVAFP 274
+V+ ++++ + P LS ++T I + F+++IKDH+R ++ P
Sbjct: 32 LVSEHDTNDNNTTP-QNTNLSPEDTHIVDKFHTIIKDHYRKNPNPNAVSPSLN---LSIP 87
Query: 275 SLSFDFSNISPVQSLSPAVARHVIEKCAAPRHGIPYPQTLAFFNWATSRLEPSLSLELFN 454
LS +FS IS V S+SP++ R IEKC+ RHGIP+ Q+LAFFNWAT+ S E +N
Sbjct: 88 DLSIEFSKISTVYSVSPSITRRAIEKCSGVRHGIPFLQSLAFFNWATTLEGFPSSPEPYN 147
Query: 455 EMIDLSGKVRQFDVAWHLIDSMKSQ 529
EMIDL+GK+R FD+AWHLID MKS+
Sbjct: 148 EMIDLAGKLRHFDLAWHLIDLMKSR 172
>ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity
to a hypothetical protein T3P18.15 gi|5454201 from
Arabidopsis thaliana BAC T3P18 gb|AC005698 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8
[Arabidopsis thaliana] gi|15450347|gb|AAK96467.1|
At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 121 bits (303), Expect = 1e-25
Identities = 80/184 (43%), Positives = 108/184 (58%), Gaps = 8/184 (4%)
Frame = +2
Query: 5 NRSLNFISLICRNTVNLYSSSSAAIVLQNDIVTGEESDERSPAPVPAAK-------LSAD 163
+R+L+FIS + T + ++S +++ E+DE S A + AA L+ +
Sbjct: 11 SRTLSFISPLLPKTFSTSATS---------LLSDHENDE-SAATITAAVSVPISPLLTPE 60
Query: 164 ETLIANNFYSLIKDHHRXXXXXXXXXXXXXXXXVAFPSLSFDFSNISPVQSLSPAVARHV 343
+T F+S+IKDH+R + +LS DFS I Q +SP+V R V
Sbjct: 61 DTQTVEKFHSIIKDHYRKNPTSPNDAILNPS--LTLHALSLDFSQIETSQ-VSPSVVRCV 117
Query: 344 IEKCAAPRHGIPYPQTLAFFNWATSRLE-PSLSLELFNEMIDLSGKVRQFDVAWHLIDSM 520
IEKC + RHGIP Q+LAFFNWATSR + S +NEMIDLSGKVRQFD+AWHLID M
Sbjct: 118 IEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLM 177
Query: 521 KSQN 532
KS+N
Sbjct: 178 KSRN 181
>ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Capsella rubella]
gi|482574795|gb|EOA38982.1| hypothetical protein
CARUB_v10011494mg [Capsella rubella]
Length = 532
Score = 119 bits (298), Expect = 4e-25
Identities = 74/158 (46%), Positives = 94/158 (59%), Gaps = 2/158 (1%)
Frame = +2
Query: 65 SSAAIVLQNDIVTGEESDERSPAPVPAAK-LSADETLIANNFYSLIKDHHRXXXXXXXXX 241
S++A L +D E DE + VP + L+ +T A +S+IKDH+R
Sbjct: 26 STSATSLLHD----HEGDESAVVSVPISPALTPADTQTAEKLHSIIKDHYRKNPTSSNDA 81
Query: 242 XXXXXXXVAFPSLSFDFSNISPVQSLSPAVARHVIEKCAAPRHGIPYPQTLAFFNWATSR 421
+ PSLS DFS I +SP+V + VIEKC RHGIP Q+L+FFNWATSR
Sbjct: 82 VLNPS--LTLPSLSLDFSQIE-ASRISPSVVQCVIEKCGGVRHGIPLHQSLSFFNWATSR 138
Query: 422 LE-PSLSLELFNEMIDLSGKVRQFDVAWHLIDSMKSQN 532
E S +NEMIDL+GKVRQFD+AWHLID MKS+N
Sbjct: 139 DEYDQKSPHPYNEMIDLAGKVRQFDLAWHLIDLMKSRN 176
>ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297336219|gb|EFH66636.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 537
Score = 118 bits (296), Expect = 7e-25
Identities = 79/183 (43%), Positives = 107/183 (58%), Gaps = 7/183 (3%)
Frame = +2
Query: 5 NRSLNFISLICRNTVNLYSSSSAAIVLQNDIVTGEESDERSPA-----PVPAAKL-SADE 166
+R+L+FIS +S+S +++ ND E+DE + VP + L + ++
Sbjct: 11 SRTLSFIS---PRLPKPFSTSPTSLL--ND----HENDESAATVTGVVSVPVSSLLTPED 61
Query: 167 TLIANNFYSLIKDHHRXXXXXXXXXXXXXXXXVAFPSLSFDFSNISPVQSLSPAVARHVI 346
T F+S+IKDH+R + P+LS DFS I +SP+V R VI
Sbjct: 62 TQTVEKFHSIIKDHYRKNPTNPNDAVLNPS--LTLPALSLDFSQID-ASRISPSVVRCVI 118
Query: 347 EKCAAPRHGIPYPQTLAFFNWATSRLE-PSLSLELFNEMIDLSGKVRQFDVAWHLIDSMK 523
EKC + RHGIP Q+LAFFNWATSR + S +NEMIDL+GKVRQFD+AWHLID MK
Sbjct: 119 EKCGSVRHGIPLHQSLAFFNWATSRDDYDQKSPHPYNEMIDLAGKVRQFDLAWHLIDLMK 178
Query: 524 SQN 532
S+N
Sbjct: 179 SRN 181