BLASTX nr result
ID: Rehmannia23_contig00028078
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00028078
(348 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris] 104 1e-20
gb|ABW81181.1| gag-pol20 [Arabidopsis cebennensis] 96 5e-18
gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi] 94 2e-17
ref|XP_006494926.1| PREDICTED: uncharacterized protein LOC102618... 94 2e-17
gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|43780... 93 3e-17
gb|ESW15613.1| hypothetical protein PHAVU_007G086900g [Phaseolus... 92 9e-17
gb|AAP53721.1| retrotransposon protein, putative, Ty3-gypsy subc... 91 1e-16
ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626... 91 2e-16
gb|ABB47092.1| retrotransposon protein, putative, Ty3-gypsy subc... 91 2e-16
gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subc... 91 2e-16
gb|AAK51571.1|AC022352_7 Putative retroelement [Oryza sativa Jap... 91 2e-16
ref|XP_006484870.1| PREDICTED: uncharacterized protein LOC102608... 90 3e-16
gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Jap... 90 3e-16
gb|ABF97503.1| retrotransposon protein, putative, unclassified [... 90 3e-16
gb|AAT81681.1| putative retrotransposon protein [Oryza sativa Ja... 90 3e-16
gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Jap... 90 3e-16
gb|AAT77832.1| putative gag-pol precursor [Oryza sativa Japonica... 90 3e-16
ref|XP_006481408.1| PREDICTED: uncharacterized protein LOC102613... 89 5e-16
gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica... 89 5e-16
ref|NP_001050456.1| Os03g0439900 [Oryza sativa Japonica Group] g... 89 5e-16
>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1859
Score = 104 bits (259), Expect = 1e-20
Identities = 52/115 (45%), Positives = 77/115 (66%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
MVIT++I FA+ KVLVD GSS DIL+ +KM++ ++P + ++GF V G
Sbjct: 640 MVITVEIDKFAIAKVLVDQGSSVDILYWETFKKMKIPEAEIQPYNEQIVGFSRERVDTKG 699
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMKF 346
IDL T+ G+ KTI I+YL+V+A +YN+++GR +N+ +A+VST HL MKF
Sbjct: 700 FIDLYTTFGDDYLSKTINIRYLLVNANTSYNILLGRPSINRLKAIVSTPHLAMKF 754
>gb|ABW81181.1| gag-pol20 [Arabidopsis cebennensis]
Length = 498
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/115 (40%), Positives = 72/115 (62%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI + I + V +VL++ GS+ D++F LR+M++D++ + P P++GF G ++ LG
Sbjct: 7 LVIMLAIGDHDVSRVLIETGSTIDVIFRKTLRQMKIDISRVSPTPRPVLGFSGERLMTLG 66
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMKF 346
TI LP G T ++ +LV D P YNVIMG LN +A+ STYHL +KF
Sbjct: 67 TIQLPVRAGGI----TKIVDFLVTDQPTIYNVIMGTPWLNLMRAIASTYHLCVKF 117
>gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi]
Length = 1902
Score = 94.0 bits (232), Expect = 2e-17
Identities = 52/114 (45%), Positives = 67/114 (58%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
MVI ++A + V K+LVD GSSADILF M+LD L+P D PL GFGG +V +G
Sbjct: 663 MVIETNLAGWTVTKILVDTGSSADILFASTFDSMKLDRNLLQPADNPLYGFGGQQVRAVG 722
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMK 343
I LP + G+ +T I + VVD + YN I GR N F AV+ +L MK
Sbjct: 723 KISLPVTFGDQINCRTEHITFDVVDMFYPYNAIFGRGVTNAFNAVIHPAYLCMK 776
>ref|XP_006494926.1| PREDICTED: uncharacterized protein LOC102618417 [Citrus sinensis]
Length = 776
Score = 93.6 bits (231), Expect = 2e-17
Identities = 44/115 (38%), Positives = 73/115 (63%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI +A+ ++L+D GSS D+LF L +M + L +T L GFGG ++VPLG
Sbjct: 490 LVIKATVASKKFDRILIDTGSSVDVLFKSTLEEMGIADRKLEYTNTSLKGFGGGKLVPLG 549
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMKF 346
++LP ++G +P +TIM+ ++VVD Y +I+GR L +AV+S ++L +K+
Sbjct: 550 VVELPITIGSSPTERTIMLDFVVVDEEGPYQMILGRPFLRMSKAVLSNHYLALKY 604
>gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|4378066|gb|AAD19359.1| polyprotein
[Sorghum bicolor]
Length = 1877
Score = 93.2 bits (230), Expect = 3e-17
Identities = 47/114 (41%), Positives = 71/114 (62%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VIT ++A + V ++LVD+GSSADI+F +M+L + L+P ++PL+GFGG ++ LG
Sbjct: 638 LVITTNVAGWGVSRILVDSGSSADIIFAGTFDQMKLSRSQLQPSESPLIGFGGKQIHALG 697
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMK 343
+ LP S G +T + + VVD + YN I GR LN+F A +L MK
Sbjct: 698 KVALPVSFGTTENARTEYVTFDVVDLHYPYNAIFGRGFLNKFNAAAHMGYLCMK 751
>gb|ESW15613.1| hypothetical protein PHAVU_007G086900g [Phaseolus vulgaris]
Length = 161
Score = 91.7 bits (226), Expect = 9e-17
Identities = 42/115 (36%), Positives = 71/115 (61%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
M++T+ IAN+ V+++L+ G+ +IL+ +K+ L + + L+ F G +V G
Sbjct: 24 MMVTVTIANYQVERILISQGNLTNILYWSTFQKLNLPDSLVMSNSESLVEFTGKQVQTRG 83
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMKF 346
+DL T+ G P +T+ ++Y++V+A YN I+GR LN+ AVVS YH+ MKF
Sbjct: 84 CVDLLTTFGTGPAYRTLTVRYILVEADLPYNAIIGRRTLNELGAVVSVYHMAMKF 138
>gb|AAP53721.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1260
Score = 91.3 bits (225), Expect = 1e-16
Identities = 48/114 (42%), Positives = 66/114 (57%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI+ +IA F V+++LVD GSSAD++F KM L AL P L GFGG V LG
Sbjct: 406 LVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTLALTPAPASLRGFGGKAVQVLG 465
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMK 343
L + G R+ + + VVD P+ YN I GR LN+F+A+ +LK+K
Sbjct: 466 QAQLLVAFGTGENRREEQVLFDVVDIPYNYNAIFGRATLNKFEAISHHNYLKLK 519
>ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626228 [Citrus sinensis]
Length = 1189
Score = 90.9 bits (224), Expect = 2e-16
Identities = 42/115 (36%), Positives = 73/115 (63%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI +A+ ++L+D GSS D+LF L +M + L +T L GFGG ++VPLG
Sbjct: 564 LVIKATVASKEFDRILIDTGSSVDVLFKSTLEEMGIADRKLEYTNTSLKGFGGGKLVPLG 623
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMKF 346
++LP ++G +P +T+++ ++VVD Y +I+GR L +AV+S ++L +K+
Sbjct: 624 VVELPITIGSSPTERTMILDFVVVDEEGPYQMILGRPFLRMSKAVLSNHYLALKY 678
>gb|ABB47092.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1064
Score = 90.5 bits (223), Expect = 2e-16
Identities = 50/114 (43%), Positives = 66/114 (57%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI+ +IA F V+++LVD GSSADI+F KM L AL P L GFGG V LG
Sbjct: 42 LVISAEIAGFEVRRILVDEGSSADIIFAEAYAKMGLPTQALTPAPASLRGFGGEPVQVLG 101
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMK 343
L + G R+ I + VVD P+ YN I GR LN+F+A+ +LK+K
Sbjct: 102 QALLLIAFGSGDNRREEQILFDVVDIPYNYNAIFGRATLNKFEAISHHNYLKLK 155
>gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1767
Score = 90.5 bits (223), Expect = 2e-16
Identities = 49/114 (42%), Positives = 66/114 (57%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI+ +IA F V+++LVD GSSAD++F KM L L P T L GFGG V LG
Sbjct: 701 LVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQTLAPAPTSLRGFGGEAVQVLG 760
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMK 343
L + G R+ I + VVD P+ YN I GR LN+F+A+ +LK+K
Sbjct: 761 QALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKFEAISHHNYLKLK 814
>gb|AAK51571.1|AC022352_7 Putative retroelement [Oryza sativa Japonica Group]
Length = 1497
Score = 90.5 bits (223), Expect = 2e-16
Identities = 50/114 (43%), Positives = 66/114 (57%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI+ +IA F V+++LVD GSSADI+F KM L AL P L GFGG V LG
Sbjct: 443 LVISAEIAGFEVRRILVDEGSSADIIFAEAYAKMGLPTQALTPAPASLRGFGGEPVQVLG 502
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMK 343
L + G R+ I + VVD P+ YN I GR LN+F+A+ +LK+K
Sbjct: 503 QALLLIAFGSGDNRREEQILFDVVDIPYNYNAIFGRATLNKFEAISHHNYLKLK 556
>ref|XP_006484870.1| PREDICTED: uncharacterized protein LOC102608935, partial [Citrus
sinensis]
Length = 301
Score = 90.1 bits (222), Expect = 3e-16
Identities = 41/115 (35%), Positives = 74/115 (64%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI +A+ ++L++ GSS D+LF L +M + L ++T L GFGG ++VPLG
Sbjct: 18 LVIKATVASKKFDRILINTGSSVDVLFKSTLEEMGIADRKLEYINTSLKGFGGGKLVPLG 77
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMKF 346
++LP ++G +P +T+++ ++VVD Y +I+GR L +AV+S ++L +K+
Sbjct: 78 VVELPITIGSSPTERTMILDFVVVDEEGPYQMILGRPFLRMSKAVLSNHYLALKY 132
>gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Japonica Group]
gi|31431922|gb|AAP53628.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1292
Score = 90.1 bits (222), Expect = 3e-16
Identities = 49/114 (42%), Positives = 66/114 (57%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI+ +IA F V+++LVD GSSAD++F KM L AL P L GFGG V LG
Sbjct: 363 LVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALTPAPVSLRGFGGEAVQVLG 422
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMK 343
L + G R+ I + VVD P+ YN I GR LN+F+A+ +LK+K
Sbjct: 423 QTLLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKFEAISHHNYLKLK 476
>gb|ABF97503.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1172
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/114 (41%), Positives = 65/114 (57%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI+ +IA F V+++LVD GSS D++F KM L AL P T L GFGG V LG
Sbjct: 375 LVISAEIAGFEVRRILVDGGSSTDVIFAEAYAKMGLTTQALTPAPTSLRGFGGEAVQVLG 434
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMK 343
L + G R+ + + VVD P+ YN I GR LN+F+ + +LK+K
Sbjct: 435 QAQLIVAFGTGENRREEQVLFDVVDIPYNYNAIFGRATLNKFEVISHHNYLKLK 488
>gb|AAT81681.1| putative retrotransposon protein [Oryza sativa Japonica Group]
Length = 1168
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/114 (41%), Positives = 65/114 (57%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI+ +IA F V+++LVD GSS D++F KM L AL P T L GFGG V LG
Sbjct: 371 LVISAEIAGFEVRRILVDGGSSTDVIFAEAYAKMGLTTQALTPAPTSLRGFGGEAVQVLG 430
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMK 343
L + G R+ + + VVD P+ YN I GR LN+F+ + +LK+K
Sbjct: 431 QAQLIVAFGTGENRREEQVLFDVVDIPYNYNAIFGRATLNKFEVISHHNYLKLK 484
>gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1291
Score = 90.1 bits (222), Expect = 3e-16
Identities = 49/114 (42%), Positives = 66/114 (57%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI+ +IA F V+++LVD GSSAD++F KM L AL P L GFGG V LG
Sbjct: 430 LVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALTPAPVSLRGFGGEAVQVLG 489
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMK 343
L + G R+ I + VVD P+ YN I GR LN+F+A+ +LK+K
Sbjct: 490 QTLLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKFEAISHHNYLKLK 543
>gb|AAT77832.1| putative gag-pol precursor [Oryza sativa Japonica Group]
gi|108709121|gb|ABF96916.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1631
Score = 89.7 bits (221), Expect = 3e-16
Identities = 49/114 (42%), Positives = 66/114 (57%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI+ +IA F V+++LVD GSSAD++F KM L AL P L GFGG V LG
Sbjct: 552 LVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALTPAPASLRGFGGEAVRVLG 611
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMK 343
L + G R+ I + VVD P+ YN I GR LN+F+A+ +LK+K
Sbjct: 612 QALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKFEAISHHNYLKLK 665
>ref|XP_006481408.1| PREDICTED: uncharacterized protein LOC102613464 [Citrus sinensis]
Length = 364
Score = 89.4 bits (220), Expect = 5e-16
Identities = 41/115 (35%), Positives = 73/115 (63%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI +A+ ++LVD GSS D+LF L ++ + L +T L GFGG +++PLG
Sbjct: 186 LVIEATVASKKFDRILVDTGSSVDVLFKSTLEEIGIADRKLEYTNTSLKGFGGGKLIPLG 245
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMKF 346
++LP ++G +P +T+M+ ++VVD Y +I+G+ L +AV+S ++L +K+
Sbjct: 246 MVELPITIGSSPTERTMMLDFVVVDEESPYQMILGQPFLRMSKAVLSNHYLALKY 300
>gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 971
Score = 89.4 bits (220), Expect = 5e-16
Identities = 47/114 (41%), Positives = 67/114 (58%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI+ +IA F V ++LVD GSSAD++F+ KM L AL P + GFGG V LG
Sbjct: 733 LVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQALTPAPASIRGFGGEAVQVLG 792
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMK 343
L + G R+ + + VVD P+ YN I+GR LN+F+A+ +LK+K
Sbjct: 793 QALLLIAFGSGENRREEQVLFDVVDIPYNYNAILGRATLNKFEAISHHNYLKLK 846
>ref|NP_001050456.1| Os03g0439900 [Oryza sativa Japonica Group]
gi|113548927|dbj|BAF12370.1| Os03g0439900, partial
[Oryza sativa Japonica Group]
Length = 420
Score = 89.4 bits (220), Expect = 5e-16
Identities = 47/114 (41%), Positives = 67/114 (58%)
Frame = +2
Query: 2 MVITMDIANFAVQKVLVDNGSSADILFMHVLRKMELDVTALRPVDTPLMGFGGSEVVPLG 181
+VI+ +IA F V ++LVD GSSAD++F+ KM L AL P + GFGG V LG
Sbjct: 182 LVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQALTPAPASIRGFGGEAVQVLG 241
Query: 182 TIDLPTSLGEAPCRKTIMIKYLVVDAPFAYNVIMGRHGLNQFQAVVSTYHLKMK 343
L + G R+ + + VVD P+ YN I+GR LN+F+A+ +LK+K
Sbjct: 242 QALLLIAFGSGENRREEQVLFDVVDIPYNYNAILGRATLNKFEAISHHNYLKLK 295