BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00028041
         (802 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517933.1| conserved hypothetical protein [Ricinus comm...   206   1e-50
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617...   165   2e-38
ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625...   161   3e-37
ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616...   155   2e-35
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   154   3e-35
ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein A...   154   5e-35
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   149   9e-34
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...   147   4e-33
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...   142   1e-31
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   135   2e-29
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...   134   4e-29
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...   134   4e-29
ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein A...   126   1e-26
ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein A...   126   1e-26
ref|XP_002523454.1| RNA binding protein, putative [Ricinus commu...   122   1e-25
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A...   120   7e-25
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...   120   7e-25
ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612...   118   3e-24
ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein A...   118   3e-24
gb|EXB89969.1| hypothetical protein L484_023622 [Morus notabilis]     116   1e-23

>ref|XP_002517933.1| conserved hypothetical protein [Ricinus communis]
           gi|223542915|gb|EEF44451.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score =  206 bits (523), Expect = 1e-50
 Identities = 102/237 (43%), Positives = 141/237 (59%), Gaps = 5/237 (2%)
 Frame = +2

Query: 107 RDRLFTKGLDVQNVCVLCGEFGEHLMHLFVDCKFASDCWNYLQMPLININAEEFGEWMVS 286
           R+RLF KG+ + N CV+ GEFGEHL HLF+D  F   CWNY Q+P++ I+  +FG W+ +
Sbjct: 2   RERLFLKGIAISNCCVVYGEFGEHLQHLFIDYPFEMQCWNYCQVPVVCIHLSDFGCWIEN 61

Query: 287 MFGTCTMNQQEKIAMALWAIWGQRNNLLWNRKDVPAAHCMRLCMEFLHSWQGANTGTI-- 460
           MF +     +EK+ M LWAIWG  N +LW  K  P   CM  CM  L+S++ AN   +  
Sbjct: 62  MFNSGDNQHKEKVCMILWAIWGNCNAMLWKNKVYPVNACMESCMGLLYSFKSANASKVAG 121

Query: 461 ---TNKDGTTHWKCPEMGNLKINIDAALDYEAGTIGFGWVMRDHNGVATSCVSKQVIGKW 631
              T+++    W  P  G  K+N+           G G V+RDH                
Sbjct: 122 HMATSRNSILRWVKPTQGLCKLNMTLPSCLVLTRWGLGMVLRDHRA-------------Q 168

Query: 632 EARIAEAMCLKEVLSWVKELSLSNVVIESDAKVVVDSLNQFASDMSEFGCIIRSCKA 802
           EAR+AEA  LKE LSW+ E SL+NV+IESDAK+V+DS +QFA D+SEFGC++ + ++
Sbjct: 169 EARLAEAPFLKETLSWICEQSLANVIIESDAKMVIDSFHQFAFDISEFGCLVNTFRS 225


>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
          Length = 440

 Score =  165 bits (418), Expect = 2e-38
 Identities = 88/270 (32%), Positives = 132/270 (48%), Gaps = 6/270 (2%)
 Frame = +2

Query: 11  PAVVPWNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLMHL 190
           P+   WN +W+L +P KVK+F+WRA ++ LP  + L  K ++V   C+ C    E + H+
Sbjct: 118 PSSSIWNQLWRLEVPSKVKHFMWRALTDVLPTTENLLKKYVEVPPACITCHASSESICHI 177

Query: 191 FVDCKFASDCWNYLQMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQRNNLL 370
            + C FA  CW    +     +      W+ ++F   ++ Q +   M  W++W  RN+++
Sbjct: 178 LLQCPFARTCWMTSSIGFFG-DGSNLLLWLEALFNRYSLEQTQLAVMICWSLWQNRNDMV 236

Query: 371 WNRKDVPAAHCMRLCMEFLHSWQGANTGTITNKD------GTTHWKCPEMGNLKINIDAA 532
           W  K       +     FL  WQ                 G   W+ P  G LK N+D A
Sbjct: 237 WRGKTSGVQQLLNSAGHFLFQWQLVRKQQFLFSQPSPIGHGAICWEPPVAGRLKCNVDVA 296

Query: 533 LDYEAGTIGFGWVMRDHNGVATSCVSKQVIGKWEARIAEAMCLKEVLSWVKELSLSNVVI 712
           L    G IGFG V+RD N    +     + G++ AR AEA+ ++E LSW+K+L LSNV I
Sbjct: 297 LFAFRGYIGFGNVIRDSNCAFMAARCCSIPGRFSARDAEALGVREALSWIKQLQLSNVTI 356

Query: 713 ESDAKVVVDSLNQFASDMSEFGCIIRSCKA 802
           E D   V ++L    S  S F  II  C+A
Sbjct: 357 EMDCLTVYNALVNNLSGPSSFSLIIEDCRA 386


>ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625297 [Citrus sinensis]
          Length = 412

 Score =  161 bits (407), Expect = 3e-37
 Identities = 87/241 (36%), Positives = 123/241 (51%), Gaps = 9/241 (3%)
 Frame = +2

Query: 26  WNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLMHLFVDCK 205
           W  +W   +P KVKNF+WRA  N LP    L +K +DV  +C +C  + E ++H  V C 
Sbjct: 170 WRKLWNSKVPNKVKNFIWRAAHNVLPTALNLISKRVDVPAMCSVCNAYEETVLHSLVACS 229

Query: 206 FASDCWNYLQMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQRNNLLWNRKD 385
           FA  CW    +  +      F +W+  +F  C+ ++     M  W IW  RNN +WN   
Sbjct: 230 FAKSCWTSSSVGFVGY-CSNFLDWLAHVFTRCSKDECNTAMMICWRIWVNRNNKVWNNTT 288

Query: 386 VPAAHCMRLCMEFLHSWQGA-------NTGTITNKDGTTHWKCPEMGNLKINIDAALDYE 544
                 +    +FL+ WQ A       N  T     G   W+ P+ G +K N+DAA+   
Sbjct: 289 SSVCQILNSAGQFLYQWQAAKQQVFDVNDDTHRLVHGALCWEQPKFGWVKCNVDAAVFES 348

Query: 545 AGTIGFGWVMRDHNG--VATSCVSKQVIGKWEARIAEAMCLKEVLSWVKELSLSNVVIES 718
            G IG G V+R+  G  VA  CVS  V G + AR AEA+ ++E LSW+KEL +  V+IE 
Sbjct: 349 QGKIGIGCVIRNSQGGFVAARCVS--VAGIFGAREAEALGIREALSWMKELQIPCVIIEM 406

Query: 719 D 721
           D
Sbjct: 407 D 407


>ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616098 [Citrus sinensis]
          Length = 510

 Score =  155 bits (392), Expect = 2e-35
 Identities = 80/272 (29%), Positives = 139/272 (51%), Gaps = 6/272 (2%)
 Frame = +2

Query: 5    QPPAVVPWNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLM 184
            +PP+   W  +WKL +P KVK+F+W A  N LP  D L    ++V +VC +C  + E + 
Sbjct: 189  EPPSSNVWQKVWKLKVPAKVKHFIWCAVVNVLPTADNLRRCQVEVPSVCPICNAYDEIVA 248

Query: 185  HLFVDCKFASDCWNYLQMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQRNN 364
            H  V+C FA  CW    +  +    E F +W+  +F   + +  +  AM  W++W  +N 
Sbjct: 249  HCLVNCSFAKSCWLLSPIGYVG-GCENFMDWLEGIFSRYSSDDCDLAAMTCWSLWENKNA 307

Query: 365  LLWNRKDVPAAHCMRLCMEFLHSWQGA------NTGTITNKDGTTHWKCPEMGNLKINID 526
             +W  +    +  + L  + L  W+        +  ++++  G   W+ P +   K N+D
Sbjct: 308  KVWKNRKGRLSSVLNLAGQVLFQWKSVRKLQVFDNNSVSSSHGAVCWQRPCVWWFKCNVD 367

Query: 527  AALDYEAGTIGFGWVMRDHNGVATSCVSKQVIGKWEARIAEAMCLKEVLSWVKELSLSNV 706
            A     +GTI +G V+++  G   +  S  +I  + AR AEA+ ++E+LSW+K L   +V
Sbjct: 368  ATTFLSSGTIMYGAVIQNSEGEFVTARSNWLISSFGAREAEAIGVREILSWLKGLPFLHV 427

Query: 707  VIESDAKVVVDSLNQFASDMSEFGCIIRSCKA 802
            +IE D+  V  +L   +   + FG +I  C+A
Sbjct: 428  IIEMDSLQVFTALTMDSFSPNGFGLLIDDCRA 459


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  154 bits (390), Expect = 3e-35
 Identities = 83/260 (31%), Positives = 130/260 (50%), Gaps = 3/260 (1%)
 Frame = +2

Query: 26   WNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLMHLFVDCK 205
            W  +WK+  PPK+ NF WRA  N LP R  L  + +D    C +C    E  +H  V+C 
Sbjct: 508  WAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECV 567

Query: 206  FASDCWNYLQMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQRNNLLWNRKD 385
             A D W+   + ++  N   F +W+ +MF  C      K     W +W +RN+++WN + 
Sbjct: 568  AARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVWNGRI 627

Query: 386  VPAAHCMRLCMEFLHSWQGAN---TGTITNKDGTTHWKCPEMGNLKINIDAALDYEAGTI 556
              +   +  C   L SW  AN      +T    ++ W+ P+ G +KIN+D A+  + G I
Sbjct: 628  WHSQQVVNGCFTMLESWFHANETLATAVTVPSYSSKWQKPDYGWIKINVDGAVFPDKGAI 687

Query: 557  GFGWVMRDHNGVATSCVSKQVIGKWEARIAEAMCLKEVLSWVKELSLSNVVIESDAKVVV 736
            G   V RDH G      +K    +   ++ EA+ ++EVLSW+ E S S +V+E+D   VV
Sbjct: 688  GA--VFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSRIVVETDCLRVV 745

Query: 737  DSLNQFASDMSEFGCIIRSC 796
             ++   +   + FG II  C
Sbjct: 746  QAIQHKSCPNTSFGFIIVDC 765


>ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 459

 Score =  154 bits (388), Expect = 5e-35
 Identities = 83/258 (32%), Positives = 128/258 (49%)
 Frame = +2

Query: 26  WNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLMHLFVDCK 205
           W  IWKL +P KV+NF+WRA SN LP    L +K + + ++C++     E ++HL VDC 
Sbjct: 170 WRKIWKLEVPAKVRNFVWRAASNVLPTAVNLRSKHVSLNDLCLVGNFDKETVLHLLVDCP 229

Query: 206 FASDCWNYLQMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQRNNLLWNRKD 385
           FA  CW   ++    I +  F +W+ ++F  CT  Q     M  W +W  RNNL+W  K 
Sbjct: 230 FARSCWIKSKVGFFGIYSS-FKDWLQALFRNCTNEQCWIAVMVCWKLWCNRNNLVWQGK- 287

Query: 386 VPAAHCMRLCMEFLHSWQGANTGTITNKDGTTHWKCPEMGNLKINIDAALDYEAGTIGFG 565
                    C         A  G +        W  P +G LK NIDA +    G +G G
Sbjct: 288 ---------CDTTKQIVNAAGVGAVA-------WSPPRVGWLKCNIDATVFANEGRVGLG 331

Query: 566 WVMRDHNGVATSCVSKQVIGKWEARIAEAMCLKEVLSWVKELSLSNVVIESDAKVVVDSL 745
            V+RD +G   + +   + G +  R AE + ++E LS +K + LS V++E+D     ++L
Sbjct: 332 SVIRDESGKFVAALCCHIRGNYSPRDAEVLSIREALSLLKSMKLSKVIVETDCLQAFNAL 391

Query: 746 NQFASDMSEFGCIIRSCK 799
                 ++ FG ++  CK
Sbjct: 392 VDRKCPLNSFGSLVLDCK 409


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  149 bits (377), Expect = 9e-34
 Identities = 86/265 (32%), Positives = 127/265 (47%), Gaps = 7/265 (2%)
 Frame = +2

Query: 26   WNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLMHLFVDCK 205
            W  +W L +PPKVK FLWR+C N LP R RL  +G++    C LC    E  MHLF  C 
Sbjct: 1417 WVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCT 1476

Query: 206  FASDCWNYL-------QMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQRNN 364
             +  CW  L       Q   +N++   FG  M  +      +Q+   A  +W+IW QRN+
Sbjct: 1477 KSRQCWQQLGLWSKVQQKAQLNLS---FGVTMFEILQELDSSQRVIWACVMWSIWKQRND 1533

Query: 365  LLWNRKDVPAAHCMRLCMEFLHSWQGANTGTITNKDGTTHWKCPEMGNLKINIDAALDYE 544
             +W  + +  A      +  L  WQ A             W+ P+ G+ K N+DAA   E
Sbjct: 1534 CIWRNEVMTTAAVRDRGLNLLTGWQNAQ----------DIWRKPDEGHFKCNVDAAFFKE 1583

Query: 545  AGTIGFGWVMRDHNGVATSCVSKQVIGKWEARIAEAMCLKEVLSWVKELSLSNVVIESDA 724
            +  +G G  +RD +G      +       +    EA+ L   + W KE +L+N+  E D+
Sbjct: 1584 SNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLYAIRWAKEQNLNNITFELDS 1643

Query: 725  KVVVDSLNQFASDMSEFGCIIRSCK 799
            K VV S +   +D+S+ G IIR C+
Sbjct: 1644 KRVVYSFHNTRNDVSDLGAIIRECR 1668


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
            Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score =  147 bits (371), Expect = 4e-33
 Identities = 88/268 (32%), Positives = 130/268 (48%), Gaps = 10/268 (3%)
 Frame = +2

Query: 26   WNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLMHLFVDCK 205
            WN IW+L +PPKVKNFLWRAC N LP R RL +KG+   + C +C +FGE   HLF  C 
Sbjct: 366  WNYIWRLKLPPKVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMCS 425

Query: 206  FASDCWNYL-----QMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQRNNLL 370
             +   W  +      M + +IN   F   + ++       Q++  ++ LW+IW  RNN +
Sbjct: 426  KSMLYWQRIGLWSPLMAVFDINV-SFPTNVFAILQHLDQQQKQIFSVTLWSIWKHRNNKV 484

Query: 371  WNRKDVPAAHCMRLCMEFLHSWQGA-NTGTITNKDGTT----HWKCPEMGNLKINIDAAL 535
            WN     A          L SW+ A N    + ++ +T     W  P  G    N+DA+ 
Sbjct: 485  WNNITDTAQDICARAGSLLTSWRNAQNIRHPSPQNPSTPNDLKWVKPSPGRFTCNVDASF 544

Query: 536  DYEAGTIGFGWVMRDHNGVATSCVSKQVIGKWEARIAEAMCLKEVLSWVKELSLSNVVIE 715
                  +G G  +RD  G      ++ +    +  + EA+ L   + WV++L L  V  E
Sbjct: 545  SQARNRVGIGVCIRDEEGRFVLAKTEWMTPLLDVELGEALGLLSAMHWVRDLQLGIVDFE 604

Query: 716  SDAKVVVDSLNQFASDMSEFGCIIRSCK 799
             D+K VVDSL    S +S F  +I  C+
Sbjct: 605  LDSKSVVDSLYGSTSGVSNFSAVINECR 632


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score =  142 bits (359), Expect = 1e-31
 Identities = 79/281 (28%), Positives = 126/281 (44%), Gaps = 25/281 (8%)
 Frame = +2

Query: 26  WNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLMHLFVDCK 205
           W+ IW+L +PP+VK  +WR C    P R RL ++G++  + CV C +  E   H+F  C+
Sbjct: 56  WSGIWRLKVPPRVKKLVWRVCRECFPTRVRLISRGVNCPSACVKCEDPHEDCYHIFFHCR 115

Query: 206 FASDCWNYLQM-PLININAEEFG---EWMVSMFGTCTMNQQEKIAMALWAIWGQRNNLLW 373
            A D WN   +  LI  +  +F    + + ++    + +Q E I   +W+IW  RN  LW
Sbjct: 116 TAIDVWNTANVWHLIAPSLSQFDNAPDIIFNLLQKLSASQMESIVTIMWSIWKSRNLKLW 175

Query: 374 NRKDVPAAHCMRLCMEFLHSWQGAN---------------------TGTITNKDGTTHWK 490
            +    +   +      L  W+ AN                     +    N+ G   W+
Sbjct: 176 QQVSESSVTILERAKHLLEGWRKANHKQGLLGQVHSPTNSRPQTHDSQNTDNRYGNIRWR 235

Query: 491 CPEMGNLKINIDAALDYEAGTIGFGWVMRDHNGVATSCVSKQVIGKWEARIAEAMCLKEV 670
            P+ G LK N+DA+    +  +G G  +RD  G      +          I EA+ L   
Sbjct: 236 KPKSGRLKCNVDASFSTSSNKVGIGMCIRDSEGNHVRSKTMWFSPLCPVNIGEALGLYHA 295

Query: 671 LSWVKELSLSNVVIESDAKVVVDSLNQFASDMSEFGCIIRS 793
             W+ EL L+NV  E D+K + D  N+   D +EFG I+ +
Sbjct: 296 TRWINELQLTNVDFEVDSKTIADYFNKARGDNTEFGSIMEN 336


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
            gi|223541858|gb|EEF43404.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 668

 Score =  135 bits (340), Expect = 2e-29
 Identities = 76/241 (31%), Positives = 116/241 (48%), Gaps = 7/241 (2%)
 Frame = +2

Query: 26   WNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLMHLFVDCK 205
            WN  WKL IP KV+N +W+ CSN +     L  + +D+  +C  C    E L H+   C 
Sbjct: 428  WNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHVLFGCS 487

Query: 206  FASDCWNYLQMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQRNNLLWNRKD 385
             A +CW+ L              W+ + F     +   K+A+   ++W QRN+ +WN++ 
Sbjct: 488  MARECWDLLGFRFSFPTESPICSWIQNFFIDNHEDTCAKMALVCGSLWNQRNHWVWNKQS 547

Query: 386  VPAAHCMRLCMEFLHSWQGANTGTIT-------NKDGTTHWKCPEMGNLKINIDAALDYE 544
                  +    + L     A +           N D T  W  PE+G LKIN D AL  +
Sbjct: 548  NTTYGVISPANQLLEQRTRAQSADEEIAPPLGHNTDVTRKWTKPELGWLKINTDTALFLK 607

Query: 545  AGTIGFGWVMRDHNGVATSCVSKQVIGKWEARIAEAMCLKEVLSWVKELSLSNVVIESDA 724
             G IG G V+RD NG      S++ +G++ AR AEA+ +KE LS++K+  +     E DA
Sbjct: 608  QGRIGLGCVVRDSNGRMIMARSERRVGRFTAREAEALSMKEALSYMKDYQMDKCFFELDA 667

Query: 725  K 727
            +
Sbjct: 668  Q 668


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
            truncatula]
          Length = 519

 Score =  134 bits (337), Expect = 4e-29
 Identities = 83/298 (27%), Positives = 128/298 (42%), Gaps = 44/298 (14%)
 Frame = +2

Query: 26   WNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLMHLFVDCK 205
            W+ IW+L +PPK+KNF+WR C   LP R++L  KG+     CV C    E + HLF  C 
Sbjct: 168  WSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCT 227

Query: 206  F------ASDCWNYLQMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQRNNL 367
            F       SD W+ +Q  +I+ +       +  +    T+ +Q +I + +W++W +RN  
Sbjct: 228  FDVQVWQLSDLWSEIQQAVIHFDTA--SAVIFDLLQRFTL-EQSQIFVTMWSLWKRRNLK 284

Query: 368  LWNRKDVPAAHCMRLCMEFLHSWQGA---------------NTGTITNKDGTTH------ 484
            +W  K+   A  +      +  WQ A               N    T +    H      
Sbjct: 285  VWENKNESCAMTVDRARVMMEEWQLATATRSAPTHQHTHLQNPSAATAQQPVVHLQQSHV 344

Query: 485  ---------------WKCPEMGNLKINIDAALDYEAGTIGFGWVMRDHNG--VATSCVSK 613
                           W+ P  G  K N+DA        IG G  +RD +G  V    +S 
Sbjct: 345  ASAVSAQQSLVPSISWERPSRGRFKCNVDAGFSTSKNRIGIGICVRDDDGAYVLAKTISF 404

Query: 614  QVIGKWEARIAEAMCLKEVLSWVKELSLSNVVIESDAKVVVDSLNQFASDMSEFGCII 787
             V+     R+ EA+ L   L W+ ++   N+    D+K+  D+ N    D+SEFG II
Sbjct: 405  DVV--HPVRVGEALGLYHALEWLSDMQFDNMDFAMDSKITYDAFNSQKDDISEFGHII 460


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
            truncatula]
          Length = 612

 Score =  134 bits (337), Expect = 4e-29
 Identities = 83/298 (27%), Positives = 128/298 (42%), Gaps = 44/298 (14%)
 Frame = +2

Query: 26   WNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLMHLFVDCK 205
            W+ IW+L +PPK+KNF+WR C   LP R++L  KG+     CV C    E + HLF  C 
Sbjct: 261  WSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCT 320

Query: 206  F------ASDCWNYLQMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQRNNL 367
            F       SD W+ +Q  +I+ +       +  +    T+ +Q +I + +W++W +RN  
Sbjct: 321  FDVQVWQLSDLWSEIQQAVIHFDTA--SAVIFDLLQRFTL-EQSQIFVTMWSLWKRRNLK 377

Query: 368  LWNRKDVPAAHCMRLCMEFLHSWQGA---------------NTGTITNKDGTTH------ 484
            +W  K+   A  +      +  WQ A               N    T +    H      
Sbjct: 378  VWENKNESCAMTVDRARVMMEEWQLATATRSAPTHQHTHLQNPSAATAQQPVVHLQQSHV 437

Query: 485  ---------------WKCPEMGNLKINIDAALDYEAGTIGFGWVMRDHNG--VATSCVSK 613
                           W+ P  G  K N+DA        IG G  +RD +G  V    +S 
Sbjct: 438  ASAVSAQQSLVPSISWERPSRGRFKCNVDAGFSTSKNRIGIGICVRDDDGAYVLAKTISF 497

Query: 614  QVIGKWEARIAEAMCLKEVLSWVKELSLSNVVIESDAKVVVDSLNQFASDMSEFGCII 787
             V+     R+ EA+ L   L W+ ++   N+    D+K+  D+ N    D+SEFG II
Sbjct: 498  DVV--HPVRVGEALGLYHALEWLSDMQFDNMDFAMDSKITYDAFNSQKDDISEFGHII 553


>ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 498

 Score =  126 bits (316), Expect = 1e-26
 Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 4/258 (1%)
 Frame = +2

Query: 26  WNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLMHLFVDCK 205
           W  +WK  +P KV +  WRAC + LP R +L TKG +    C+ C    E   HL   C 
Sbjct: 178 WKKLWKARVPGKVMHCAWRACHDLLPTRAKLVTKGYEGTLKCLSCPHPCETTAHLVCACP 237

Query: 206 FASDCW--NYLQMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQRNNLLWNR 379
            A      ++L + ++  +   F EWM+    + + ++ +K+ M +W +W  RNN+LW+ 
Sbjct: 238 IAQTILLGSHLNITVLMSSIFNFKEWMLEQATSLSDDKFQKLLMIIWGLWRNRNNMLWSD 297

Query: 380 KDVPAAHCMRLCMEFLHSWQGAN--TGTITNKDGTTHWKCPEMGNLKINIDAALDYEAGT 553
           K   A   +   M + H +   N      +       W  P + +LK+N+D A       
Sbjct: 298 KQQTAQEIICGTMSWYHEFTTINYPQQKPSKTSQRVKWFPPAVDHLKLNVDGAFMPNETE 357

Query: 554 IGFGWVMRDHNGVATSCVSKQVIGKWEARIAEAMCLKEVLSWVKELSLSNVVIESDAKVV 733
            G G ++RD+ G+  +  +K + G   A  AE   ++  L W+K  +  N ++E+D +V 
Sbjct: 358 GGVGGILRDNQGIVVAAFTKHISGINSANQAELKAIRAGLIWLKTYNFHNCILETDCQVA 417

Query: 734 VDSLNQFASDMSEFGCII 787
           V+ +        E+G II
Sbjct: 418 VNEVQLQDYISLEYGNII 435


>ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 393

 Score =  126 bits (316), Expect = 1e-26
 Identities = 74/261 (28%), Positives = 115/261 (44%), Gaps = 3/261 (1%)
 Frame = +2

Query: 26  WNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLMHLFVDCK 205
           W  IW+  +PPKV++F+WR C   +P R  L  +       C+ CG   E  +HLF DC 
Sbjct: 51  WKKIWQANVPPKVRSFIWRLCLEVIPTRAALSRRLFITDVRCIFCGNEVETGLHLFRDCP 110

Query: 206 FASDCW--NYLQMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQRNNLLWNR 379
                W  N L +   +        W+  +    +M Q E   MALW +W +RNN++W  
Sbjct: 111 VVQSFWKHNPLHLRSYSYPGSTLAVWVFLVMDNLSMQQLEGFFMALWTVWIERNNMIWRG 170

Query: 380 KDVPAAHCMRLCMEFLHSWQGANT-GTITNKDGTTHWKCPEMGNLKINIDAALDYEAGTI 556
                ++     M+ L  ++  +T  ++  K     W CP  G LK+NID A   +    
Sbjct: 171 GSCNPSNMSVWAMQLLEEYKKVHTKPSVKMKRPRAKWCCPPSGRLKLNIDGAYLEDGRKG 230

Query: 557 GFGWVMRDHNGVATSCVSKQVIGKWEARIAEAMCLKEVLSWVKELSLSNVVIESDAKVVV 736
           G G V+R+  G   + +S+ +     A   EA  L+  L          V IE D  +V+
Sbjct: 231 GIGVVVRNEYGNCVAALSRHMPYASSAMHMEAEALRASLLIAIHQGWDEVEIEGDCAIVM 290

Query: 737 DSLNQFASDMSEFGCIIRSCK 799
            +L     D+ E   I+  C+
Sbjct: 291 KALANTDGDVIEVSSILSDCR 311


>ref|XP_002523454.1| RNA binding protein, putative [Ricinus communis]
           gi|223537282|gb|EEF38913.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 446

 Score =  122 bits (306), Expect = 1e-25
 Identities = 76/250 (30%), Positives = 119/250 (47%), Gaps = 2/250 (0%)
 Frame = +2

Query: 2   GQPPAVVPWNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHL 181
           G  P V   N  W+L I   VK+F+WR   N LP  + L  + +D+  +C  CG   E  
Sbjct: 122 GTAPVV---NKCWRLNILHGVKHFMWRLNHNLLPCIENLKNRKIDMGEICSRCGGCVETQ 178

Query: 182 MHLFVDCKFASDCW-NY-LQMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQ 355
            ++F  C+F    W  Y L + +  I  E+   W+  +      +  EK AM LW  W  
Sbjct: 179 TYVFKKCQFVRSFWLTYPLGLRVDTIVVEDLKNWVNQIHSVGDDDFIEKFAMLLWCYWNL 238

Query: 356 RNNLLWNRKDVPAAHCMRLCMEFLHSWQGANTGTITNKDGTTHWKCPEMGNLKINIDAAL 535
           RN  ++ RK+      ++  + FLH +Q +N         T+   CP    +K NIDAA+
Sbjct: 239 RNKFIFERKEEDVVTTVQRALVFLHGFQTSNVACSAPTVLTSKGSCPSSDFIKTNIDAAV 298

Query: 536 DYEAGTIGFGWVMRDHNGVATSCVSKQVIGKWEARIAEAMCLKEVLSWVKELSLSNVVIE 715
           D        G V+RD  G     + K+V  K ++ +AEA+ + E L  V++ +   V+IE
Sbjct: 299 DENRSLSDVGAVVRDQAGSVLFSLQKRVSLKCQSDVAEAVAILEALITVQDSNFQQVIIE 358

Query: 716 SDAKVVVDSL 745
           SD+   ++ L
Sbjct: 359 SDSLTAINGL 368


>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 1152

 Score =  120 bits (300), Expect = 7e-25
 Identities = 74/265 (27%), Positives = 117/265 (44%), Gaps = 7/265 (2%)
 Frame = +2

Query: 26   WNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNV-CVLCGEFGEHLMHLFVDC 202
            W  +W+  +PPKV+   WR     LP R  L  K + + +V CV C    E  +HLF +C
Sbjct: 803  WCKLWRTQVPPKVRMHAWRLVKGTLPSRAALVKKQVQLPDVNCVFCSTNVEDSLHLFKNC 862

Query: 203  KFASDCWNYLQMPLININAEEFGE-----WMVSMFGTCTMNQQEKIAMALWAIWGQRNNL 367
            +     W   Q  ++ I+           W   M    +  + E   MALW IW +RNN+
Sbjct: 863  EALQPFW---QQGMVQIHPRTHPSISVEVWFWDMVEMLSGEKLEGFLMALWVIWVERNNM 919

Query: 368  LWNRKDVPAAHCMRLCMEFLHSWQGANTGTI-TNKDGTTHWKCPEMGNLKINIDAALDYE 544
            +W  +     + M      L  ++  +  ++ T K   + W CP  G L++NID +  +E
Sbjct: 920  VWRGQFYNITNMMDWSSSLLLEYKHCHQRSVGTRKKNKSKWTCPPSGRLRVNIDGSFAHE 979

Query: 545  AGTIGFGWVMRDHNGVATSCVSKQVIGKWEARIAEAMCLKEVLSWVKELSLSNVVIESDA 724
             G  G G V+RDH G   + +++       A   E   L+  L    +    +V +ESD 
Sbjct: 980  EGRGGVGVVIRDHKGACVASLARPFPNAASAIHMEVEALRAGLLVCVQQGWRDVEVESDC 1039

Query: 725  KVVVDSLNQFASDMSEFGCIIRSCK 799
              +V ++     D S  G II  C+
Sbjct: 1040 MNLVQAMQTDGEDFSMVGRIIEDCQ 1064


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score =  120 bits (300), Expect = 7e-25
 Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 8/272 (2%)
 Frame = +2

Query: 8   PPAVVPWNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLMH 187
           P  VV W  +WKL I  K K F+WRA +N LP R  L  + +   + C  C    E +MH
Sbjct: 178 PSNVVVWRRLWKLNIAAKCKVFMWRALTNRLPVRTNLVMRKVTEDSSCPCCVSQPETIMH 237

Query: 188 LFVDCKFASDCWNYLQMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQRNNL 367
           + V C   +  W Y+ +           E   S+F     +      +  W++W   N++
Sbjct: 238 ILVLCDVTTQSWKYVNLYQFLSQVSNLLEGARSVFEHFDDSIVASFVVLWWSLWTNMNDV 297

Query: 368 LWNRKDVPAAHCMRLCMEFLHSWQGANTGTITNK------DGTTHWKCPEMGNLKINIDA 529
           +WN K +           FL  W  A   T  ++       G   W+ P  G  K+N+DA
Sbjct: 298 VWNGKKLSWRAVASRASSFLFQWGKARKLTDYHQLGRHFAGGDCLWQKPATGKYKLNVDA 357

Query: 530 ALDYEAGTIGFGWVMRDHNGVATSCVSKQVIGKWEAR--IAEAMCLKEVLSWVKELSLSN 703
           +   E G  G  +V+RD+ G+  + V   +I  + A   +AEA  LKE LSW+    +  
Sbjct: 358 SSSAERGKSGASFVLRDNAGIWITGV--LIIRPYIANPDVAEAWALKEALSWIHAKGMEE 415

Query: 704 VVIESDAKVVVDSLNQFASDMSEFGCIIRSCK 799
           V IE+D    ++ L +     S   C+++ C+
Sbjct: 416 VQIETDCLRNIELLEEELHPNSYLLCLLKDCQ 447


>ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612946 [Citrus sinensis]
          Length = 589

 Score =  118 bits (295), Expect = 3e-24
 Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 7/264 (2%)
 Frame = +2

Query: 2    GQPPAVVPWNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHL 181
            G   A   W  IW+L +P K+K F+W+A  N LP  + L+ + +  +  C LC    E +
Sbjct: 263  GSTGAPQGWQHIWRLNLPEKIKIFVWKATKNLLPMAENLWRRKVLKEPTCHLCKAGCEDV 322

Query: 182  MHLFVDCKFASDCWN--YLQMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQ 355
             H  ++C+ A   W   +L+  + ++  E+    M+        ++ + +A   W  W  
Sbjct: 323  FHALMECRVARKIWKCTHLENEVKSVIREDMLSVMIGAMNNWAKSEVDYVATIWWVAWHA 382

Query: 356  RNNLLWNRKDVPAAHCM---RLCMEFLHSWQGANTGTITN--KDGTTHWKCPEMGNLKIN 520
            RN LL+  K +     +   +  ME   + Q     +  N  K     W  P    +K+N
Sbjct: 383  RNKLLFQGKKLDPIGSVAKGKTVMEVYQAQQVKERESHRNTVKGKMQIWTPPPNNKVKVN 442

Query: 521  IDAALDYEAGTIGFGWVMRDHNGVATSCVSKQVIGKWEARIAEAMCLKEVLSWVKELSLS 700
            +DAA+  +  + G G V+R+H G   +   K +  +    IAEA  +K  +   K+LSLS
Sbjct: 443  VDAAVKEDRKSAGLGVVIRNHRGQVLAAAVKSMNFQGNIAIAEAHAVKWGMEVAKDLSLS 502

Query: 701  NVVIESDAKVVVDSLNQFASDMSE 772
            +V+IE+D K V D  N+  S+ +E
Sbjct: 503  SVIIETDCKNVADLANKKVSNRTE 526


>ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 888

 Score =  118 bits (295), Expect = 3e-24
 Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 4/258 (1%)
 Frame = +2

Query: 26   WNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLMHLFVDCK 205
            W  +W+  IP KV    WRAC+N LP R RL  KG      CV C  + E + H+   C 
Sbjct: 570  WKKLWQSKIPGKVLICAWRACNNILPTRARLTIKGYTGPVKCVSCPHWYEDIAHIMCACP 629

Query: 206  FASDCWNY--LQMPLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQRNNLLWNR 379
             A D  +   L++  I     +F EWM+    + +  +  K+ M +W +W  RNN  W++
Sbjct: 630  LAKDILSRGPLKLSAIWSPIFDFKEWMLEQALSLSTEKFAKLLMVIWGLWRNRNNTFWSQ 689

Query: 380  KDVPAAHCMRLCMEFLHSWQGANTGTITNKDGTT--HWKCPEMGNLKINIDAALDYEAGT 553
            K   AA  +   M + + +  A    +  K+  T   W  P +G LK+N+D A  +    
Sbjct: 690  KPQFAADILCGTMAWYYEFVEATKPLVPKKNQQTRPRWSPPAVGVLKLNVDGAFLHNNTD 749

Query: 554  IGFGWVMRDHNGVATSCVSKQVIGKWEARIAEAMCLKEVLSWVKELSLSNVVIESDAKVV 733
             G G ++R+ +G A +  +  +      +  E   ++  L W+ +L   +  I++D ++V
Sbjct: 750  GGIGGILRNSHGHAIAAFAYHLTNVTSPKQVELEAIRTGLQWMHKLGYHDYEIQTDCQLV 809

Query: 734  VDSLNQFASDMSEFGCII 787
            V  +      + E+G I+
Sbjct: 810  VQDIVATDFLLMEYGNIL 827


>gb|EXB89969.1| hypothetical protein L484_023622 [Morus notabilis]
          Length = 756

 Score =  116 bits (290), Expect = 1e-23
 Identities = 78/260 (30%), Positives = 111/260 (42%), Gaps = 6/260 (2%)
 Frame = +2

Query: 26  WNSIWKLFIPPKVKNFLWRACSNFLPHRDRLFTKGLDVQNVCVLCGEFGEHLMHLFVDCK 205
           W  +W L IP K+KNF+WR  S FLP    L  +G++    C   GE  E + H    C 
Sbjct: 19  WRKLWDLHIPNKIKNFMWRTISGFLPTFANLVRRGINCATRCQHYGEEDESIWHALWMCS 78

Query: 206 FASDCWNYLQM--PLININAEEFGEWMVSMFGTCTMNQQEKIAMALWAIWGQRNNLLWNR 379
                W        L  + A  F    V      T    E   +  W IW  RN  + +R
Sbjct: 79  TVIQVWEVSAFWHKLKPLKAGGFEALCVMFSNVATEEDLEIFCVLAWTIWAARNQFIHHR 138

Query: 380 KDVPAAHCM----RLCMEFLHSWQGANTGTITNKDGTTHWKCPEMGNLKINIDAALDYEA 547
                   +    R+  EF      A     T       WK P  G  K+N DA++    
Sbjct: 139 LYREPTDILGKTGRIIAEFQSCCNPAAKHRTTVPVSKVRWKPPVAGLFKLNTDASVREGT 198

Query: 548 GTIGFGWVMRDHNGVATSCVSKQVIGKWEARIAEAMCLKEVLSWVKELSLSNVVIESDAK 727
            +IG G V+RD +G+  +C+ K++ G +   +AE M L+E L + +E      V E DA 
Sbjct: 199 SSIGIGVVIRDGDGIVCACLVKRIAGSFSPFLAECMALREGLIFAQERGFFISVAEFDAV 258

Query: 728 VVVDSLNQFASDMSEFGCII 787
            VV ++ + +S M E G II
Sbjct: 259 CVVQAVKE-SSTMGEEGVII 277