BLASTX nr result

ID: Rehmannia23_contig00028013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00028013
         (396 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004230552.1| PREDICTED: uncharacterized protein LOC101246...    79   6e-13
ref|XP_004230554.1| PREDICTED: uncharacterized protein LOC101246...    60   4e-07
ref|XP_006351810.1| PREDICTED: uncharacterized protein LOC102590...    57   2e-06

>ref|XP_004230552.1| PREDICTED: uncharacterized protein LOC101246968 isoform 1 [Solanum
           lycopersicum] gi|460369406|ref|XP_004230553.1|
           PREDICTED: uncharacterized protein LOC101246968 isoform
           2 [Solanum lycopersicum]
          Length = 693

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 54/129 (41%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
 Frame = +2

Query: 29  MDRSDTSGFVSGGA---GLNVSPVFFLLIYRLSN*I----SVVFFYRLAIHFFKIV*LSF 187
           MDR+DTSGFVSGG    GL++   F L+   L   +    + V F+R       ++  + 
Sbjct: 1   MDRADTSGFVSGGGNSLGLSLLTCFVLIYEFLYEYVIRLFTCVLFFRSTFSVCSMI--TS 58

Query: 188 INPFKNDMYSSFCGDHIKKSNFGDTTLRLDGFGYGTREAATFLDSQSNGGDQNTCKNTLD 367
           I+P KN MY     D  +     DTTLRLD FGYG  E   F  S++N G     +N +D
Sbjct: 59  IDPNKNKMYRVPDVDLTRS----DTTLRLDCFGYGGNECVRFGGSETNSGSHVMQQNAID 114

Query: 368 DGCKLVLGL 394
           DGCKLVLGL
Sbjct: 115 DGCKLVLGL 123


>ref|XP_004230554.1| PREDICTED: uncharacterized protein LOC101246968 isoform 3 [Solanum
           lycopersicum] gi|460369410|ref|XP_004230555.1|
           PREDICTED: uncharacterized protein LOC101246968 isoform
           4 [Solanum lycopersicum]
          Length = 639

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/72 (47%), Positives = 42/72 (58%)
 Frame = +2

Query: 179 LSFINPFKNDMYSSFCGDHIKKSNFGDTTLRLDGFGYGTREAATFLDSQSNGGDQNTCKN 358
           ++ I+P KN MY     D  +     DTTLRLD FGYG  E   F  S++N G     +N
Sbjct: 2   ITSIDPNKNKMYRVPDVDLTRS----DTTLRLDCFGYGGNECVRFGGSETNSGSHVMQQN 57

Query: 359 TLDDGCKLVLGL 394
            +DDGCKLVLGL
Sbjct: 58  AIDDGCKLVLGL 69


>ref|XP_006351810.1| PREDICTED: uncharacterized protein LOC102590322 [Solanum tuberosum]
          Length = 639

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/72 (45%), Positives = 42/72 (58%)
 Frame = +2

Query: 179 LSFINPFKNDMYSSFCGDHIKKSNFGDTTLRLDGFGYGTREAATFLDSQSNGGDQNTCKN 358
           ++ I+P KN+MY     +  +     DTTLRLD FGYG  E   F  S +N G     +N
Sbjct: 2   ITSIDPNKNNMYRVPDVELARS----DTTLRLDCFGYGGNECVRFGGSGTNSGSHVMQQN 57

Query: 359 TLDDGCKLVLGL 394
            +DDGCKLVLGL
Sbjct: 58  AIDDGCKLVLGL 69


Top