BLASTX nr result
ID: Rehmannia23_contig00027948
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00027948
(445 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO23078.1| polyprotein [Glycine max] 85 2e-23
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group] 77 1e-22
gb|ABA98602.2| retrotransposon protein, putative, unclassified [... 77 3e-21
ref|NP_001057345.1| Os06g0266100 [Oryza sativa Japonica Group] g... 74 1e-20
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 83 2e-20
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 75 2e-20
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 75 2e-20
emb|CAD40196.2| OSJNBb0043H09.2 [Oryza sativa Japonica Group] 72 2e-20
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 79 2e-20
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group] 75 2e-20
emb|CAE03018.3| OSJNBa0091D06.3 [Oryza sativa Japonica Group] 69 2e-20
emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group] 69 2e-20
emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group] 72 3e-20
ref|NP_001054298.1| Os04g0682600 [Oryza sativa Japonica Group] g... 72 3e-20
gb|AAL77156.1|AC091732_7 Putative polyprotein [Oryza sativa Japo... 79 6e-20
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 80 8e-20
gb|AAN59765.1| Putative retroelement [Oryza sativa Japonica Grou... 73 1e-19
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa... 67 2e-19
gb|ABA93987.1| retrotransposon protein, putative, unclassified [... 77 2e-19
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group] 81 2e-19
>gb|AAO23078.1| polyprotein [Glycine max]
Length = 1552
Score = 85.1 bits (209), Expect(2) = 2e-23
Identities = 38/55 (69%), Positives = 47/55 (85%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
+KLQP+RQ++ LRKN KLS RY+GPF VL K+G+VAYKL+LP +RIHPVFHVS
Sbjct: 1360 VKLQPYRQHSAVLRKNQKLSMRYFGPFKVLAKIGDVAYKLELPSAARIHPVFHVS 1414
Score = 49.3 bits (116), Expect(2) = 2e-23
Identities = 17/48 (35%), Positives = 33/48 (68%)
Frame = +2
Query: 284 PLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFD 427
P++++ R + RG ++EQ+ V+W + D++TWED++ + YPTF+
Sbjct: 1443 PVKILASRIIIRGHNQIEQILVQWENGLQDEATWEDIEDIKASYPTFN 1490
>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
Length = 1602
Score = 77.0 bits (188), Expect(2) = 1e-22
Identities = 37/58 (63%), Positives = 45/58 (77%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVSL*K 293
LKLQP+ Q++V R N KL+ +YYGPF V+ K+G VAYKL LPE S +HPVFHVSL K
Sbjct: 1392 LKLQPYVQSSVAPRANHKLAFKYYGPFQVIDKLGTVAYKLQLPETSSVHPVFHVSLLK 1449
Score = 55.1 bits (131), Expect(2) = 1e-22
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = +2
Query: 281 IPLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDPWGQ 439
+PL ++++R K+G + QV + W+H+ +Q+TWEDL+ L ++P WGQ
Sbjct: 1471 LPLAILDQRLAKKGNSVITQVLIHWSHTVPEQATWEDLEDLKTRFPNALAWGQ 1523
>gb|ABA98602.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2202
Score = 77.0 bits (188), Expect(2) = 3e-21
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
LKLQP+ Q +V R N KLS ++YGPF VLQ+VG VAYKLDLP S IHPV HVS
Sbjct: 1298 LKLQPYVQQSVMTRANRKLSFKFYGPFQVLQRVGSVAYKLDLPSTSMIHPVVHVS 1352
Score = 50.1 bits (118), Expect(2) = 3e-21
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +2
Query: 281 IPLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDPWGQ 439
+P ++ERR +RG + +EQV+V W +++ TWE+L+ L K+P WGQ
Sbjct: 1380 VPHRILERRLRQRGAKLIEQVQVEWKGTSSPAITWENLEELRHKFPAAPAWGQ 1432
>ref|NP_001057345.1| Os06g0266100 [Oryza sativa Japonica Group]
gi|113595385|dbj|BAF19259.1| Os06g0266100, partial
[Oryza sativa Japonica Group]
Length = 399
Score = 74.3 bits (181), Expect(2) = 1e-20
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
+KLQP+ Q++V R N KL+ RY+GPF V+QK G VAYKL LP S IHPVFHVS
Sbjct: 209 IKLQPYVQSSVAARANHKLAFRYFGPFQVIQKFGSVAYKLQLPTTSSIHPVFHVS 263
Score = 50.8 bits (120), Expect(2) = 1e-20
Identities = 19/54 (35%), Positives = 35/54 (64%)
Frame = +2
Query: 284 PLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDPWGQGS 445
P+ +++ R +K+G V QV ++W+ +A + +TWEDL+ L ++P WGQ +
Sbjct: 289 PIMLLDNRLIKKGNTTVSQVLIQWSDTAVEDATWEDLEDLRARFPEALAWGQAT 342
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 83.2 bits (204), Expect(2) = 2e-20
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
LKLQP+RQ +R +LKL S++YGPF +++KVG VAYKL LPEGS IHPVFHVS
Sbjct: 1455 LKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEKVGRVAYKLQLPEGSNIHPVFHVS 1509
Score = 41.6 bits (96), Expect(2) = 2e-20
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +2
Query: 284 PLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDP 430
P+ V++RR + RG V Q V W + + ++TWED + +P+F+P
Sbjct: 1538 PVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWEDASMIQSMFPSFNP 1586
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 75.5 bits (184), Expect(2) = 2e-20
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
LK+QP+R N++ L +LKL SRYYGPF VL+++G VAYKL LP S+IH VFHVS
Sbjct: 735 LKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVTSQIHHVFHVS 789
Score = 49.3 bits (116), Expect(2) = 2e-20
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +2
Query: 284 PLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDP 430
PL V++RR + R E V Q ++ WA+ +TWED F+ K +P+F P
Sbjct: 818 PLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDAAFITKVFPSFTP 866
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 75.5 bits (184), Expect(2) = 2e-20
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
LK+QP+R N++ L +LKL SRYYGPF VL+++G VAYKL LP S+IH VFHVS
Sbjct: 514 LKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVTSQIHHVFHVS 568
Score = 49.3 bits (116), Expect(2) = 2e-20
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +2
Query: 284 PLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDP 430
PL V++RR + R E V Q ++ WA+ +TWED F+ K +P+F P
Sbjct: 597 PLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDAAFITKVFPSFTP 645
>emb|CAD40196.2| OSJNBb0043H09.2 [Oryza sativa Japonica Group]
Length = 1409
Score = 72.0 bits (175), Expect(2) = 2e-20
Identities = 35/55 (63%), Positives = 40/55 (72%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
LKLQP+ Q +V R N KL RY+GPF VL +VG VAY+L LP S IHPVFHVS
Sbjct: 1215 LKLQPYIQTSVTKRANHKLEFRYFGPFQVLDRVGAVAYRLQLPSYSAIHPVFHVS 1269
Score = 52.4 bits (124), Expect(2) = 2e-20
Identities = 21/55 (38%), Positives = 36/55 (65%)
Frame = +2
Query: 281 IPLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDPWGQGS 445
IPL+ +++R K+G + V Q+ W+ S A+++TWED++ L ++P WGQ S
Sbjct: 1294 IPLQFLDKRLTKKGNKTVVQLLTHWSDSPAEEATWEDMEELRARFPGALAWGQAS 1348
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 79.0 bits (193), Expect(2) = 2e-20
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
LK+QP+R N++ L +LKL S+YYGPF VL+++G VAYKL LP S+IHPVFHVS
Sbjct: 1180 LKMQPYRHNSLGLHSSLKLHSKYYGPFRVLERIGSVAYKLLLPASSQIHPVFHVS 1234
Score = 45.4 bits (106), Expect(2) = 2e-20
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 284 PLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDP 430
P V+ERR + + V Q +V+WA+ +TWED F+ K +P F+P
Sbjct: 1263 PTAVLERRLIPQNNAPVVQWKVQWANLPLSAATWEDAAFISKVFPAFNP 1311
>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
Length = 933
Score = 75.1 bits (183), Expect(2) = 2e-20
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
LKLQP+ Q++V R N KLS RY+GP+ +L KVG VAYKL LP S +HPVFHVS
Sbjct: 748 LKLQPYVQSSVAKRANHKLSFRYFGPYQILSKVGSVAYKLQLPADSMVHPVFHVS 802
Score = 49.3 bits (116), Expect(2) = 2e-20
Identities = 20/54 (37%), Positives = 37/54 (68%)
Frame = +2
Query: 284 PLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDPWGQGS 445
P+++++ R K+G + V Q+ V W++ A ++TWED + L +++P+ PWGQ S
Sbjct: 828 PVQILDTRIQKKGNKVVRQILVCWSNLPAVEATWEDEEELKQRFPSALPWGQVS 881
>emb|CAE03018.3| OSJNBa0091D06.3 [Oryza sativa Japonica Group]
Length = 753
Score = 69.3 bits (168), Expect(2) = 2e-20
Identities = 31/55 (56%), Positives = 41/55 (74%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
LKLQP+ Q +V +R N KL+ +Y+GP+ V K+G VAY+L LP + IHPVFHVS
Sbjct: 315 LKLQPYVQTSVAVRANHKLAFKYFGPYQVTAKIGTVAYQLQLPSSTSIHPVFHVS 369
Score = 55.1 bits (131), Expect(2) = 2e-20
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +2
Query: 281 IPLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDPWGQGS 445
+PL +++RR KRG V QV ++W+ S + +TWEDL L ++P WGQ +
Sbjct: 394 VPLRILDRRLTKRGNSAVAQVLIQWSASVPEDATWEDLDDLRSRFPAALAWGQAN 448
>emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]
Length = 642
Score = 69.3 bits (168), Expect(2) = 2e-20
Identities = 31/55 (56%), Positives = 41/55 (74%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
LKLQP+ Q +V +R N KL+ +Y+GP+ V K+G VAY+L LP + IHPVFHVS
Sbjct: 427 LKLQPYVQTSVAVRANHKLAFKYFGPYQVTAKIGTVAYQLQLPSSTSIHPVFHVS 481
Score = 55.1 bits (131), Expect(2) = 2e-20
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +2
Query: 281 IPLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDPWGQGS 445
+PL +++RR KRG V QV ++W+ S + +TWEDL L ++P WGQ +
Sbjct: 506 VPLRILDRRLTKRGNSAVAQVLIQWSASVPEDATWEDLDDLRSRFPAALAWGQAN 560
>emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group]
Length = 1575
Score = 72.4 bits (176), Expect(2) = 3e-20
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
+KLQP+ Q +V R N KLS +YYGPF VLQ++G VAY+L LP S IHPV HVS
Sbjct: 1395 MKLQPYIQQSVMTRSNRKLSFKYYGPFQVLQRIGLVAYRLQLPAHSLIHPVVHVS 1449
Score = 51.6 bits (122), Expect(2) = 3e-20
Identities = 18/53 (33%), Positives = 35/53 (66%)
Frame = +2
Query: 281 IPLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDPWGQ 439
IP+++++ R+++RG + ++QV +RW+ ++ TWE L + K+P WGQ
Sbjct: 1477 IPIKILDHRSIRRGSKMIKQVLIRWSGVSSSADTWESLDEMQAKFPAAPAWGQ 1529
>ref|NP_001054298.1| Os04g0682600 [Oryza sativa Japonica Group]
gi|113565869|dbj|BAF16212.1| Os04g0682600, partial
[Oryza sativa Japonica Group]
Length = 395
Score = 72.4 bits (176), Expect(2) = 3e-20
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
+KLQP+ Q +V R N KLS +YYGPF VLQ++G VAY+L LP S IHPV HVS
Sbjct: 215 MKLQPYIQQSVMTRSNRKLSFKYYGPFQVLQRIGLVAYRLQLPAHSLIHPVVHVS 269
Score = 51.6 bits (122), Expect(2) = 3e-20
Identities = 18/53 (33%), Positives = 35/53 (66%)
Frame = +2
Query: 281 IPLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDPWGQ 439
IP+++++ R+++RG + ++QV +RW+ ++ TWE L + K+P WGQ
Sbjct: 297 IPIKILDHRSIRRGSKMIKQVLIRWSGVSSSADTWESLDEMQAKFPAAPAWGQ 349
>gb|AAL77156.1|AC091732_7 Putative polyprotein [Oryza sativa Japonica Group]
gi|21672107|gb|AAM74469.1|AC124213_27 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431768|gb|AAP53494.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 999
Score = 79.0 bits (193), Expect(2) = 6e-20
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVSL*K 293
LKLQPF Q ++ R K+S RY+GP+TVL++VG+VAY+LDLP GS+IHPV HVSL K
Sbjct: 862 LKLQPFAQLSIAQRSCQKISFRYFGPYTVLERVGQVAYRLDLPAGSQIHPVVHVSLLK 919
Score = 43.9 bits (102), Expect(2) = 6e-20
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +2
Query: 284 PLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDPWGQ 439
P V+ R +KRGK V ++W A+ +TWE+L+ L ++P+ WGQ
Sbjct: 945 PEVVLRRSLIKRGKAAVPYGLIQWTGVPAELATWENLRHLKLRFPSAPAWGQ 996
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 80.5 bits (197), Expect(2) = 8e-20
Identities = 37/55 (67%), Positives = 44/55 (80%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
LKLQP+RQN +R +LKL +YYGPF VL+KVG VAY+L LPE + IHPVFHVS
Sbjct: 824 LKLQPYRQNAFGIRGSLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVS 878
Score = 42.0 bits (97), Expect(2) = 8e-20
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 284 PLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDP 430
P+ V++RR + R V Q + W++ ++TWED ++ K +P F P
Sbjct: 907 PVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQKVFPNFQP 955
>gb|AAN59765.1| Putative retroelement [Oryza sativa Japonica Group]
gi|108706656|gb|ABF94451.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 415
Score = 73.2 bits (178), Expect(2) = 1e-19
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
LKLQPF Q +V R N KL+ R+YGPF +L +VGEVAYKL LP S IHPV HVS
Sbjct: 239 LKLQPFVQQSVVTRANRKLAFRFYGPFQILARVGEVAYKLALPATSLIHPVIHVS 293
Score = 48.9 bits (115), Expect(2) = 1e-19
Identities = 20/55 (36%), Positives = 37/55 (67%)
Frame = +2
Query: 281 IPLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDPWGQGS 445
IP ++++RR V++G + VEQ++VRW+ + TWE+ + L +++ + WGQ S
Sbjct: 321 IPSQILDRRFVRKGSKMVEQLQVRWSGPDSQVVTWENGQELRRRFSIAEAWGQAS 375
>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1608
Score = 67.0 bits (162), Expect(2) = 2e-19
Identities = 40/101 (39%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Frame = +3
Query: 6 IHYRH*QYKYYN*ILSVHYNWYQSH*SLEMAEGTRMKD--------LKLQPFRQNTVQLR 161
+H H + K+ +L H N Q + + + LKLQP+ Q V R
Sbjct: 1362 LHEWHTERKFMQQLLQQHLNRAQQQMKHQADKKRSFRQFAVGDWVYLKLQPYVQTFVAQR 1421
Query: 162 KNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
KL+ RYYGPF V+ +VG VAY + LP S IHPVFHVS
Sbjct: 1422 ACHKLAFRYYGPFQVMSRVGTVAYHIQLPATSSIHPVFHVS 1462
Score = 54.3 bits (129), Expect(2) = 2e-19
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +2
Query: 281 IPLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDPWGQGS 445
+P + +++R VK+G V Q+ W HS+ +STWED++ L ++P WGQ S
Sbjct: 1487 VPFQFLDKRLVKKGNRSVLQLLTHWYHSSPSESTWEDMEDLFARFPRALAWGQAS 1541
>gb|ABA93987.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1485
Score = 77.0 bits (188), Expect(2) = 2e-19
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
LKLQP+ Q +V R N KLS ++YGPF VLQ+VG VAYKLDLP S IHPV HVS
Sbjct: 1299 LKLQPYVQQSVMTRANRKLSFKFYGPFQVLQRVGSVAYKLDLPSTSMIHPVVHVS 1353
Score = 44.3 bits (103), Expect(2) = 2e-19
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +2
Query: 293 VVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDPWGQ 439
++ERR ++G + +EQV+V W +++ TWE+L+ L K+P WGQ
Sbjct: 1385 ILERRLRQQGAKLIEQVQVEWKGTSSPAITWENLEELHHKFPAALAWGQ 1433
>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1246
Score = 81.3 bits (199), Expect(2) = 2e-19
Identities = 36/55 (65%), Positives = 46/55 (83%)
Frame = +3
Query: 120 LKLQPFRQNTVQLRKNLKLSSRYYGPFTVLQKVGEVAYKLDLPEGSRIHPVFHVS 284
LK+QP+RQN LR +LKL +++YGPF VL+K+G+VAYKL LPE + IHPVFHVS
Sbjct: 1115 LKMQPYRQNAFGLRGSLKLRAKFYGPFRVLEKIGKVAYKLQLPEEANIHPVFHVS 1169
Score = 40.0 bits (92), Expect(2) = 2e-19
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 284 PLEVVERRTVKRGKEEVEQVRVRWAHSAADQSTWEDLKFLLKKYPTFDP 430
PL V+ RR + R E V Q + W + + +TWE+ F+ +P F P
Sbjct: 1198 PLAVLARRVIPRQNEPVVQWLIHWENLTPEDATWENATFIQATFPHFRP 1246