BLASTX nr result
ID: Rehmannia23_contig00027927
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00027927
(491 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB90595.1| hypothetical protein L484_008195 [Morus notabilis] 70 3e-10
gb|EOY22343.1| Pentatricopeptide repeat superfamily protein isof... 67 2e-09
ref|XP_006439995.1| hypothetical protein CICLE_v10019054mg [Citr... 67 3e-09
gb|EPS70001.1| hypothetical protein M569_04760 [Genlisea aurea] 67 3e-09
ref|XP_006476940.1| PREDICTED: pentatricopeptide repeat-containi... 66 5e-09
emb|CBI14894.3| unnamed protein product [Vitis vinifera] 63 5e-08
ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_002516878.1| pentatricopeptide repeat-containing protein,... 62 6e-08
ref|XP_004236307.1| PREDICTED: pentatricopeptide repeat-containi... 62 8e-08
ref|XP_006351446.1| PREDICTED: pentatricopeptide repeat-containi... 60 3e-07
ref|XP_002318099.2| hypothetical protein POPTR_0012s09340g [Popu... 59 7e-07
ref|NP_199839.1| pentatricopeptide repeat-containing protein [Ar... 59 9e-07
ref|XP_004301033.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
gb|ESW03750.1| hypothetical protein PHAVU_011G039200g [Phaseolus... 56 6e-06
ref|XP_006280073.1| hypothetical protein CARUB_v10025955mg [Caps... 56 6e-06
ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
>gb|EXB90595.1| hypothetical protein L484_008195 [Morus notabilis]
Length = 1505
Score = 70.1 bits (170), Expect = 3e-10
Identities = 47/128 (36%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Frame = +1
Query: 142 FLPFLQTPARQQP-------QKXXXXXXXXXXXXXXLKFFKTRTSDPDPSLEGRIPLQKN 300
FLPFLQ ++ ++ +KFFK+R + DP EGR+ LQKN
Sbjct: 58 FLPFLQEEEEEEENEVINNEEQESKPCEKEEEEDPLVKFFKSRPTTQDPQREGRLSLQKN 117
Query: 301 RRTSWHLAPTFE---KTETVSET---ENYNLPIAQSAXXXXXXXXXXXXILGIARALPEN 462
RR+SWHLAP E + ET S++ E+ + IL IAR LP+N
Sbjct: 118 RRSSWHLAPDSEFADEPETESDSNIAESLEKEQRKKQEFEQIPEGIAGEILRIARNLPQN 177
Query: 463 VTMGEALE 486
+T+GEALE
Sbjct: 178 LTLGEALE 185
>gb|EOY22343.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|508775088|gb|EOY22344.1| Pentatricopeptide
repeat superfamily protein isoform 1 [Theobroma cacao]
Length = 722
Score = 67.4 bits (163), Expect = 2e-09
Identities = 47/131 (35%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Frame = +1
Query: 142 FLPFLQTPARQQ-----PQKXXXXXXXXXXXXXXLKFFKTRTSDPDPSLEGRIPLQKNRR 306
FLPFLQ P +Q+ P+ ++FFK+R S PDP +G+ LQKNRR
Sbjct: 59 FLPFLQEPQQQELETENPKSQELGKEEDDVKDPIIRFFKSRPSTPDPPRQGKFSLQKNRR 118
Query: 307 TSWHLAP---TFEKTETVSETENYNLPIAQSA---------XXXXXXXXXXXXILGIARA 450
+SWHLAP + E+ SE E I A I+ IA+
Sbjct: 119 SSWHLAPDIRSLPDPESDSEPEPDGENIFSEAKQHLDSTPEDYTELPVGIVGDIVRIAKN 178
Query: 451 LPENVTMGEAL 483
LPEN T+GE L
Sbjct: 179 LPENSTLGELL 189
>ref|XP_006439995.1| hypothetical protein CICLE_v10019054mg [Citrus clementina]
gi|557542257|gb|ESR53235.1| hypothetical protein
CICLE_v10019054mg [Citrus clementina]
Length = 716
Score = 66.6 bits (161), Expect = 3e-09
Identities = 42/122 (34%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Frame = +1
Query: 142 FLPFLQ------TPARQQPQKXXXXXXXXXXXXXXLKFFKTRTSDPDPSLEGRIPLQKNR 303
FLPFLQ P + ++ LKFFK++T DP G++ LQKNR
Sbjct: 64 FLPFLQQQRQDPNPQNENHEEEEEEDEEEEAIDPLLKFFKSQTPTQDPPALGKLSLQKNR 123
Query: 304 RTSWHLAPTFEK-TETVSETENYNLPIAQSAXXXXXXXXXXXXILGIARALPENVTMGEA 480
R+SWHL+P ++ S+ + +L IL IAR +PEN T+GE
Sbjct: 124 RSSWHLSPHVNSPNQSESDINDISLEDEAKQQMGSLPDGIVGEILRIARNMPENSTLGEM 183
Query: 481 LE 486
LE
Sbjct: 184 LE 185
>gb|EPS70001.1| hypothetical protein M569_04760 [Genlisea aurea]
Length = 700
Score = 66.6 bits (161), Expect = 3e-09
Identities = 46/116 (39%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Frame = +1
Query: 142 FLPFLQTPARQQPQKXXXXXXXXXXXXXXL-KFFKTRTSDPDPSLEGRIPLQKNRRTSWH 318
FLPFLQT P L +FFKTR PDP+ E RI LQKNRRTSWH
Sbjct: 55 FLPFLQT---LDPNSDHGIAEEEEEEEDPLFRFFKTRVIIPDPNAESRISLQKNRRTSWH 111
Query: 319 LAPTFEKTETVSETENYNLPIAQSAXXXXXXXXXXXXILGIARALPENVTMGEALE 486
L+ + E + ++ P I IAR LP+NVT+GEAL+
Sbjct: 112 LSSQSQHLEEPNAADS-PPPHPDIPTIPPEPEGIVAEIAKIARELPQNVTIGEALD 166
>ref|XP_006476940.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Citrus sinensis]
Length = 712
Score = 65.9 bits (159), Expect = 5e-09
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Frame = +1
Query: 142 FLPFLQTPARQQPQ---KXXXXXXXXXXXXXXLKFFKTRTSDPDPSLEGRIPLQKNRRTS 312
FLPFLQ RQ P + LKFFK++T DP G++ LQKNRR+S
Sbjct: 64 FLPFLQQQ-RQDPNPQNENHEEDEEEEAIDPLLKFFKSQTPTQDPPALGKLSLQKNRRSS 122
Query: 313 WHLAPTFEK-TETVSETENYNLPIAQSAXXXXXXXXXXXXILGIARALPENVTMGEALE 486
WHL+P ++ S+ + +L IL IAR +PEN T+GE LE
Sbjct: 123 WHLSPHVNSPNQSESDINDISLEDEAKQQMGSLPDGIVGEILRIARNMPENSTLGEMLE 181
>emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 62.8 bits (151), Expect = 5e-08
Identities = 43/116 (37%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +1
Query: 142 FLPFLQTPARQ-QPQKXXXXXXXXXXXXXXLKFFKTRTSDPDPSLEGRIPLQKNRRTSWH 318
FLPFLQ R Q Q+ L+FFK+RTS DP E + LQKNRR SW
Sbjct: 49 FLPFLQEQDRTLQHQRQQKEEEDEDPNDPILRFFKSRTSTQDPRFESKFSLQKNRRPSWR 108
Query: 319 LAPTFE-KTETVSETENYNLPIAQSAXXXXXXXXXXXXILGIARALPENVTMGEAL 483
LA T + +++ + E + + IL AR LPEN T+GE L
Sbjct: 109 LASTTDPESDAEFDVEEEKEQVVSDS--CTSLQGISGEILHFARNLPENSTLGEVL 162
>ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein
VITISV_010606 [Vitis vinifera]
Length = 692
Score = 62.8 bits (151), Expect = 5e-08
Identities = 43/116 (37%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +1
Query: 142 FLPFLQTPARQ-QPQKXXXXXXXXXXXXXXLKFFKTRTSDPDPSLEGRIPLQKNRRTSWH 318
FLPFLQ R Q Q+ L+FFK+RTS DP E + LQKNRR SW
Sbjct: 49 FLPFLQEQDRTLQHQRQQKEEEDEDPNDPILRFFKSRTSTQDPRFESKFSLQKNRRPSWR 108
Query: 319 LAPTFE-KTETVSETENYNLPIAQSAXXXXXXXXXXXXILGIARALPENVTMGEAL 483
LA T + +++ + E + + IL AR LPEN T+GE L
Sbjct: 109 LASTTDPESDAEFDVEEEKEQVVSDS--CTSLQGISGEILHFARNLPENSTLGEVL 162
>ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Cucumis sativus]
Length = 708
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +1
Query: 232 KFFKTRTSDP-DPSLEGRIPLQKNRRTSWHLAPT---FEKTETVSETENYNLPIAQSAXX 399
+FFK++TS DPS E ++PLQKNRR+SWHLA F + E E + L A S
Sbjct: 92 RFFKSQTSTTQDPSRESKLPLQKNRRSSWHLASDVEFFNEAEVTLEEDKEQLRSA-SRNS 150
Query: 400 XXXXXXXXXXILGIARALPENVTMGEAL 483
I+GIAR L +N+T+GEAL
Sbjct: 151 RVLPGGPVGEIVGIARNLSQNMTLGEAL 178
>ref|XP_002516878.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543966|gb|EEF45492.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 714
Score = 62.4 bits (150), Expect = 6e-08
Identities = 51/160 (31%), Positives = 62/160 (38%), Gaps = 9/160 (5%)
Frame = +1
Query: 31 NLNFQTPQLFKILKPPRNPRKTFXXXXXXXXXXXXXXFLPFLQTPAR-------QQPQKX 189
N N+ P LF KP R F FLPFL+ QQ +
Sbjct: 23 NPNYSKPHLFISSKPARPSFPLFVAHSTPIPRFSPSIFLPFLEQDQEPKSQIQEQQRPEQ 82
Query: 190 XXXXXXXXXXXXXLKFFKTRTSDP-DPSLEGRIPLQKNRRTSWHLAPTFEK-TETVSETE 363
LKFFK+RTS DP EG+ LQ+NRRT W LAP E E +
Sbjct: 83 ENNDSDLTLTDPILKFFKSRTSTTQDPPHEGKFSLQRNRRTQWRLAPDVESDIGPDDEID 142
Query: 364 NYNLPIAQSAXXXXXXXXXXXXILGIARALPENVTMGEAL 483
+ + IL +AR LPEN +GE L
Sbjct: 143 DILKNKLLGSSNSDSSKGIVREILNLARELPENTILGEQL 182
>ref|XP_004236307.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Solanum lycopersicum]
Length = 706
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +1
Query: 232 KFFKTRT----SDPDPSLEGRIPLQKNRRTSWHLAPTFEKTETVSETENYNLPIAQSAXX 399
+FF+TRT SDPDP G++ LQ+NR+TSW LAP TE + EN + ++
Sbjct: 93 RFFQTRTADQESDPDPGNLGKLSLQENRKTSWQLAPITASTED-EDVENIPKSLLETLPP 151
Query: 400 XXXXXXXXXXILGIARALPENVTMGEAL 483
I+ A+ LPENVT+GE L
Sbjct: 152 SPRIEGIVSQIVEKAKNLPENVTLGEVL 179
>ref|XP_006351446.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Solanum tuberosum]
Length = 716
Score = 60.1 bits (144), Expect = 3e-07
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Frame = +1
Query: 232 KFFKTRT----SDPDPSLEGRIPLQKNRRTSWHLAPTFEKTE-TVSETENYNLPIAQSAX 396
+FF+T+T SDPDP G++ LQ+NR+TSWHLA TE E E+ + +
Sbjct: 100 RFFQTQTADQESDPDPGSLGKLSLQENRKTSWHLASITASTEDDDDEVEDIQNSLLDTLP 159
Query: 397 XXXXXXXXXXXILGIARALPENVTMGEALEK 489
I+ A++LPENVT+GE L +
Sbjct: 160 PSPRVEGIVSQIVEKAKSLPENVTLGEVLSE 190
>ref|XP_002318099.2| hypothetical protein POPTR_0012s09340g [Populus trichocarpa]
gi|550326735|gb|EEE96319.2| hypothetical protein
POPTR_0012s09340g [Populus trichocarpa]
Length = 722
Score = 58.9 bits (141), Expect = 7e-07
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = +1
Query: 229 LKFFKTRTSDP-DPSLEGRIPLQKNRRTSWHLAPTFEKTETVSETENYNLP-IAQSAXXX 402
L+FFK++TS DP +G+ L+KNRR+SW LAP F+ S+T N P I S
Sbjct: 110 LRFFKSQTSTTHDPPRQGKFSLKKNRRSSWRLAPQFD-----SDTLNEESPQIVTSNSVS 164
Query: 403 XXXXXXXXXILGIARALPENVTMGEAL 483
IL +AR LP+N+T+GE L
Sbjct: 165 RLPDRVVGEILKLARELPKNMTLGEIL 191
>ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product
[Arabidopsis thaliana] gi|332008538|gb|AED95921.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 723
Score = 58.5 bits (140), Expect = 9e-07
Identities = 38/93 (40%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Frame = +1
Query: 229 LKFFKTRT----SDPDPSLEGRIPLQKNRRTSWHLAPTFEKTETVSETENYNLPIAQS-- 390
LKFFK+RT S DP+ E + LQKNRRTSWHLAP F ET E++ +
Sbjct: 101 LKFFKSRTLTSESTADPARESKFSLQKNRRTSWHLAPDFADPETEIESKPEESVFVTNQQ 160
Query: 391 --AXXXXXXXXXXXXILGIARALPENVTMGEAL 483
IL +A+ L EN T+GE L
Sbjct: 161 TLGVHIPFESGVAREILELAKNLKENQTLGEML 193
>ref|XP_004301033.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 714
Score = 58.2 bits (139), Expect = 1e-06
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Frame = +1
Query: 232 KFFKTRTSDPDPSLEGRIPLQKNRRTSWHLAPTFEKTE------TVSETENYNL-PIAQS 390
+FFK+RTS DP EG++ LQKNRR+SWHLA + +E V E + L P+ S
Sbjct: 93 RFFKSRTSTQDPQREGKLSLQKNRRSSWHLADDLDDSEPDSGVDPVPEVQEQQLGPV--S 150
Query: 391 AXXXXXXXXXXXXILGIARALPENVTMGEAL 483
+ IL AR L +N+T+GE L
Sbjct: 151 SDSIPLADGIVGQILQKARNLGQNLTLGEEL 181
>gb|ESW03750.1| hypothetical protein PHAVU_011G039200g [Phaseolus vulgaris]
Length = 717
Score = 55.8 bits (133), Expect = 6e-06
Identities = 44/132 (33%), Positives = 59/132 (44%), Gaps = 18/132 (13%)
Frame = +1
Query: 142 FLPFLQTPARQQPQKXXXXXXXXXXXXXX-------LKFFKTRT--SDPDPSLEGRIPLQ 294
FLP+LQ +P++ KFFKTR S DP EG + LQ
Sbjct: 63 FLPYLQREPEPEPEEQEVIETIEEEKEQARDPDDPIYKFFKTRNRISFQDPGREGSLSLQ 122
Query: 295 KNRRTSWHLA-----PTFEKTETVSETENYNLPIAQSAXXXXXXXXXXXXILG----IAR 447
KNRRTSWHLA P E++ET E + + + I+G +AR
Sbjct: 123 KNRRTSWHLASDTSDPVEEESETGLEDGSLLVEEKREMVCEKKGLPLPEGIVGEIIQLAR 182
Query: 448 ALPENVTMGEAL 483
LP+N+T+ E L
Sbjct: 183 NLPQNLTLEEGL 194
>ref|XP_006280073.1| hypothetical protein CARUB_v10025955mg [Capsella rubella]
gi|482548777|gb|EOA12971.1| hypothetical protein
CARUB_v10025955mg [Capsella rubella]
Length = 731
Score = 55.8 bits (133), Expect = 6e-06
Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Frame = +1
Query: 229 LKFFKTRT----SDPDPSLEGRIPLQKNRRTSWHLAPTFEKTETVSETEN-YNLPIAQS- 390
LKFFK+RT S DP+ E R LQKNRRTSWHLA F + E+E+ ++ +A
Sbjct: 109 LKFFKSRTLSSESTEDPARESRFSLQKNRRTSWHLASDFADSGAEIESESEESVSVANQQ 168
Query: 391 --AXXXXXXXXXXXXILGIARALPENVTMGEAL 483
IL +A+ L EN T+GE L
Sbjct: 169 TPGVLNPFENGVAGEILELAKNLKENQTLGEML 201
>ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 55.8 bits (133), Expect = 6e-06
Identities = 39/99 (39%), Positives = 49/99 (49%), Gaps = 15/99 (15%)
Frame = +1
Query: 232 KFFKTRT--SDPDPSLEGRIPLQKNRRTSWHLAPTF-------------EKTETVSETEN 366
KFFKTRT S DP EG++ LQKNRR SWHLA EK +TV + +
Sbjct: 92 KFFKTRTRFSSQDPGKEGKLSLQKNRRISWHLASDLIEEEEEPEMGLIEEKEKTVFQKKA 151
Query: 367 YNLPIAQSAXXXXXXXXXXXXILGIARALPENVTMGEAL 483
LP I+ +AR LP+N+T+ EAL
Sbjct: 152 LPLP-----------EGIVGEIVQLARNLPQNLTLEEAL 179