BLASTX nr result
ID: Rehmannia23_contig00027747
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia23_contig00027747 (408 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006358787.1| PREDICTED: pentatricopeptide repeat-containi... 160 2e-37 ref|XP_004248026.1| PREDICTED: pentatricopeptide repeat-containi... 160 2e-37 gb|EPS58676.1| hypothetical protein M569_16136, partial [Genlise... 140 2e-31 ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containi... 130 1e-28 gb|EMJ07970.1| hypothetical protein PRUPE_ppa025361mg [Prunus pe... 125 6e-27 ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containi... 119 5e-25 gb|EXB93122.1| hypothetical protein L484_024459 [Morus notabilis] 114 2e-23 ref|XP_004296694.1| PREDICTED: pentatricopeptide repeat-containi... 114 2e-23 ref|XP_006830661.1| hypothetical protein AMTR_s00210p00017530 [A... 113 2e-23 ref|XP_003524064.1| PREDICTED: pentatricopeptide repeat-containi... 107 1e-21 emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera] 105 6e-21 gb|EOY10792.1| Pentatricopeptide repeat (PPR) superfamily protei... 104 1e-20 ref|XP_004504788.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20 gb|ESW31089.1| hypothetical protein PHAVU_002G208300g [Phaseolus... 102 7e-20 ref|XP_002522032.1| pentatricopeptide repeat-containing protein,... 97 2e-18 ref|XP_006400384.1| hypothetical protein EUTSA_v10013477mg [Eutr... 90 4e-16 ref|XP_002871814.1| pentatricopeptide repeat-containing protein ... 88 1e-15 ref|XP_006479008.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15 ref|XP_006287650.1| hypothetical protein CARUB_v10000860mg, part... 87 3e-15 ref|NP_197340.1| pentatricopeptide repeat-containing protein [Ar... 84 1e-14 >ref|XP_006358787.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like isoform X1 [Solanum tuberosum] gi|565385886|ref|XP_006358788.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like isoform X2 [Solanum tuberosum] gi|565385889|ref|XP_006358789.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like isoform X3 [Solanum tuberosum] Length = 472 Score = 160 bits (405), Expect = 2e-37 Identities = 76/94 (80%), Positives = 82/94 (87%) Frame = +1 Query: 124 GGSSNSRSLPNDDYFATIHHISNIVRRDIFMERTLNKMRISTIVNSELVYRVLRSCCSCG 303 G S RS+PNDDYFATIHH+SNIVRRDI++ERTLNKM IS+IVNSELVYRVLRSCC G Sbjct: 45 GKGSCGRSVPNDDYFATIHHVSNIVRRDIYLERTLNKMHISSIVNSELVYRVLRSCCQHG 104 Query: 304 IECFRFFNWARTHHPNYDPTTLEFEELLKILALT 405 IE FRFFNWART HP YDPTT+EFEELLK LA T Sbjct: 105 IESFRFFNWARTQHPQYDPTTVEFEELLKTLART 138 >ref|XP_004248026.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like [Solanum lycopersicum] Length = 470 Score = 160 bits (404), Expect = 2e-37 Identities = 80/116 (68%), Positives = 90/116 (77%), Gaps = 2/116 (1%) Frame = +1 Query: 64 SSIFTFVKSLTTGNNFVQG--IGGSSNSRSLPNDDYFATIHHISNIVRRDIFMERTLNKM 237 +SIF +K++ + G S RS+PNDDYFATIHH+SNIVRRDI++ERTLNKM Sbjct: 21 TSIFRCIKTIAPSIDQCSNPFSGKGSCGRSVPNDDYFATIHHVSNIVRRDIYLERTLNKM 80 Query: 238 RISTIVNSELVYRVLRSCCSCGIECFRFFNWARTHHPNYDPTTLEFEELLKILALT 405 IS IVNSELVYRVLRSCC GIE FRFFNWART HP YDPTT+EFEELLK LA T Sbjct: 81 HISRIVNSELVYRVLRSCCQHGIESFRFFNWARTQHPQYDPTTVEFEELLKTLART 136 >gb|EPS58676.1| hypothetical protein M569_16136, partial [Genlisea aurea] Length = 419 Score = 140 bits (352), Expect = 2e-31 Identities = 65/84 (77%), Positives = 75/84 (89%) Frame = +1 Query: 157 DDYFATIHHISNIVRRDIFMERTLNKMRISTIVNSELVYRVLRSCCSCGIECFRFFNWAR 336 DDYFATIHHISNIVRRDI++ERTL KM IS++VNSELVYRV+ +C S GIE FRFFNWAR Sbjct: 1 DDYFATIHHISNIVRRDIYLERTLMKMNISSLVNSELVYRVINNCSSSGIESFRFFNWAR 60 Query: 337 THHPNYDPTTLEFEELLKILALTR 408 + HPNY+PTTLEFE LLK+LA T+ Sbjct: 61 SCHPNYEPTTLEFEALLKVLAQTK 84 >ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like [Cucumis sativus] gi|449518358|ref|XP_004166209.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like [Cucumis sativus] Length = 455 Score = 130 bits (328), Expect = 1e-28 Identities = 67/99 (67%), Positives = 78/99 (78%), Gaps = 7/99 (7%) Frame = +1 Query: 133 SNSRSLPN-------DDYFATIHHISNIVRRDIFMERTLNKMRISTIVNSELVYRVLRSC 291 SNS SL N DDYFA IHHIS+IVRRD +MERTLNK+RIS + NSELV+RVLR+C Sbjct: 24 SNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNL-NSELVFRVLRAC 82 Query: 292 CSCGIECFRFFNWARTHHPNYDPTTLEFEELLKILALTR 408 + G E FRFFNWA +H+P+Y PTTLEFEEL+K LA TR Sbjct: 83 SNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTR 121 >gb|EMJ07970.1| hypothetical protein PRUPE_ppa025361mg [Prunus persica] Length = 460 Score = 125 bits (314), Expect = 6e-27 Identities = 62/97 (63%), Positives = 75/97 (77%), Gaps = 1/97 (1%) Frame = +1 Query: 121 IGGSSNSRSLPN-DDYFATIHHISNIVRRDIFMERTLNKMRISTIVNSELVYRVLRSCCS 297 + + +R +P DDYF+ I HI+NIVRRD FMERTLNK+RI+ V+SELVYRVLR+C + Sbjct: 31 VNAAPQNRVVPTKDDYFSAIQHITNIVRRDHFMERTLNKLRIT--VDSELVYRVLRACSA 88 Query: 298 CGIECFRFFNWARTHHPNYDPTTLEFEELLKILALTR 408 G E RFFNWARTHHP Y PTTLE EEL+K LA T+ Sbjct: 89 AGTESLRFFNWARTHHPTYHPTTLELEELVKTLARTK 125 >ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Vitis vinifera] gi|296085168|emb|CBI28663.3| unnamed protein product [Vitis vinifera] Length = 454 Score = 119 bits (297), Expect = 5e-25 Identities = 66/115 (57%), Positives = 81/115 (70%) Frame = +1 Query: 64 SSIFTFVKSLTTGNNFVQGIGGSSNSRSLPNDDYFATIHHISNIVRRDIFMERTLNKMRI 243 S I T +K+LTT +Q N+ + DDYFA +HHIS IVRRD ++ERTLNK+ I Sbjct: 19 SPILTHLKTLTTITTHLQ------NTITSKKDDYFAVVHHISAIVRRDFYLERTLNKLPI 72 Query: 244 STIVNSELVYRVLRSCCSCGIECFRFFNWARTHHPNYDPTTLEFEELLKILALTR 408 S V S+LVYRVLRSC + G E RFFNWAR+ H +Y PTTLE+EELLK LA T+ Sbjct: 73 S--VTSDLVYRVLRSCPNSGTESLRFFNWARS-HLSYQPTTLEYEELLKTLARTK 124 >gb|EXB93122.1| hypothetical protein L484_024459 [Morus notabilis] Length = 470 Score = 114 bits (284), Expect = 2e-23 Identities = 56/93 (60%), Positives = 71/93 (76%) Frame = +1 Query: 130 SSNSRSLPNDDYFATIHHISNIVRRDIFMERTLNKMRISTIVNSELVYRVLRSCCSCGIE 309 +S S D+YFA IHHISNIV+RD +MERTLNK+RI+ V+S+LV+RVLR+C G E Sbjct: 44 NSTKPSSSKDNYFAAIHHISNIVQRDFYMERTLNKLRIAA-VDSDLVFRVLRACHKFGPE 102 Query: 310 CFRFFNWARTHHPNYDPTTLEFEELLKILALTR 408 RFFNWAR+H P+Y PT++E EEL K LA T+ Sbjct: 103 SLRFFNWARSHQPSYRPTSVELEELAKNLARTK 135 >ref|XP_004296694.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like [Fragaria vesca subsp. vesca] Length = 444 Score = 114 bits (284), Expect = 2e-23 Identities = 55/84 (65%), Positives = 68/84 (80%) Frame = +1 Query: 157 DDYFATIHHISNIVRRDIFMERTLNKMRISTIVNSELVYRVLRSCCSCGIECFRFFNWAR 336 DDYF+ IHHI+NIVRRD FMERTLNK+RI ++S+LV+RVLR+ S E RFFNWAR Sbjct: 28 DDYFSAIHHITNIVRRDHFMERTLNKLRIP--IDSDLVFRVLRASSSSPTESLRFFNWAR 85 Query: 337 THHPNYDPTTLEFEELLKILALTR 408 THHP+Y PT+LE EEL+K LA ++ Sbjct: 86 THHPSYHPTSLETEELVKTLARSK 109 >ref|XP_006830661.1| hypothetical protein AMTR_s00210p00017530 [Amborella trichopoda] gi|548837251|gb|ERM98077.1| hypothetical protein AMTR_s00210p00017530 [Amborella trichopoda] Length = 459 Score = 113 bits (283), Expect = 2e-23 Identities = 56/84 (66%), Positives = 66/84 (78%) Frame = +1 Query: 157 DDYFATIHHISNIVRRDIFMERTLNKMRISTIVNSELVYRVLRSCCSCGIECFRFFNWAR 336 DDYFA +HHISNIVRRD F+ERTL K+ ++ + ELVYRVLRSC GIE FRFFNWAR Sbjct: 46 DDYFAVVHHISNIVRRDYFLERTLQKLNLT--LTPELVYRVLRSCNKNGIESFRFFNWAR 103 Query: 337 THHPNYDPTTLEFEELLKILALTR 408 T H +Y PTT+EFEEL+K L T+ Sbjct: 104 T-HASYHPTTIEFEELIKTLGQTK 126 >ref|XP_003524064.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like isoform X1 [Glycine max] gi|571455122|ref|XP_006579993.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like isoform X2 [Glycine max] gi|571455124|ref|XP_006579994.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like isoform X3 [Glycine max] Length = 450 Score = 107 bits (268), Expect = 1e-21 Identities = 60/118 (50%), Positives = 80/118 (67%) Frame = +1 Query: 46 SAPITRSSIFTFVKSLTTGNNFVQGIGGSSNSRSLPNDDYFATIHHISNIVRRDIFMERT 225 S P ++ + K+LTT +S+SR D+YFA IHH+SNIVRRD ++ERT Sbjct: 13 SKPRLLLNLHSITKTLTT----------ASSSR----DEYFAVIHHVSNIVRRDFYLERT 58 Query: 226 LNKMRISTIVNSELVYRVLRSCCSCGIECFRFFNWARTHHPNYDPTTLEFEELLKILA 399 LNK+RI+ V ELV+RVLR+C + E RFFNWART HP+Y PT+LEFE+++ LA Sbjct: 59 LNKLRIT--VTPELVFRVLRACSNNPTESLRFFNWART-HPSYSPTSLEFEQIVTTLA 113 >emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera] Length = 356 Score = 105 bits (262), Expect = 6e-21 Identities = 54/81 (66%), Positives = 64/81 (79%) Frame = +1 Query: 166 FATIHHISNIVRRDIFMERTLNKMRISTIVNSELVYRVLRSCCSCGIECFRFFNWARTHH 345 FA +HHIS IVRRD ++ERTLNK+ IS V S+LVYRVLRSC + G E RFFNWAR+ H Sbjct: 4 FAVVHHISAIVRRDFYLERTLNKLPIS--VTSDLVYRVLRSCPNSGTESLRFFNWARS-H 60 Query: 346 PNYDPTTLEFEELLKILALTR 408 +Y PTTLE+EELLK LA T+ Sbjct: 61 XSYQPTTLEYEELLKTLARTK 81 >gb|EOY10792.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao] Length = 455 Score = 104 bits (260), Expect = 1e-20 Identities = 58/110 (52%), Positives = 76/110 (69%) Frame = +1 Query: 67 SIFTFVKSLTTGNNFVQGIGGSSNSRSLPNDDYFATIHHISNIVRRDIFMERTLNKMRIS 246 +I + +LT+ N+ S ++ ++ DDYFA IHHISN VRR++ ERTLN+M IS Sbjct: 17 NILCSLTTLTSANSLQIA---SVSTTAVSKDDYFAAIHHISNTVRREVHPERTLNRMNIS 73 Query: 247 TIVNSELVYRVLRSCCSCGIECFRFFNWARTHHPNYDPTTLEFEELLKIL 396 VNSELV+RVLRSC + E RFF+WAR H Y PT++EFEEL+KIL Sbjct: 74 --VNSELVFRVLRSCSNSPTESLRFFSWARAH---YVPTSVEFEELVKIL 118 >ref|XP_004504788.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like isoform X1 [Cicer arietinum] gi|502142093|ref|XP_004504789.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like isoform X2 [Cicer arietinum] Length = 453 Score = 103 bits (258), Expect = 2e-20 Identities = 49/83 (59%), Positives = 65/83 (78%), Gaps = 2/83 (2%) Frame = +1 Query: 157 DDYFATIHHISNIVRRDIFMERTLNKMRISTIVNSELVYRVLRSCCSCGIECFRFFNWAR 336 D+YFA I H++NIVRRD ++ERTLNK+RI+ + ELV+RVLR+C S E RFFNWAR Sbjct: 34 DEYFAAIQHVANIVRRDFYLERTLNKLRIT--ITPELVFRVLRACSSSPTESLRFFNWAR 91 Query: 337 T--HHPNYDPTTLEFEELLKILA 399 + HHP Y PT++EFE+++ ILA Sbjct: 92 SHHHHPPYTPTSVEFEQIVTILA 114 >gb|ESW31089.1| hypothetical protein PHAVU_002G208300g [Phaseolus vulgaris] Length = 448 Score = 102 bits (253), Expect = 7e-20 Identities = 50/81 (61%), Positives = 62/81 (76%) Frame = +1 Query: 157 DDYFATIHHISNIVRRDIFMERTLNKMRISTIVNSELVYRVLRSCCSCGIECFRFFNWAR 336 D YFA IHHISNIVRRD ++ERTLNK+RI V ELV+RVLR+C + RFFNWAR Sbjct: 35 DQYFAVIHHISNIVRRDFYLERTLNKLRIH--VTPELVFRVLRACSTAPTPSLRFFNWAR 92 Query: 337 THHPNYDPTTLEFEELLKILA 399 + HP+Y PT+LEFE+++ LA Sbjct: 93 S-HPSYTPTSLEFEQIVTTLA 112 >ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223538836|gb|EEF40436.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 451 Score = 97.1 bits (240), Expect = 2e-18 Identities = 57/129 (44%), Positives = 80/129 (62%) Frame = +1 Query: 22 RMFMFRKTSAPITRSSIFTFVKSLTTGNNFVQGIGGSSNSRSLPNDDYFATIHHISNIVR 201 ++F+ KT+A +T + +K L +S S + D YFA IHHI+NIVR Sbjct: 6 KLFILPKTTATVTLQPL-RHLKVL------------ASTSTNNTKDAYFALIHHITNIVR 52 Query: 202 RDIFMERTLNKMRISTIVNSELVYRVLRSCCSCGIECFRFFNWARTHHPNYDPTTLEFEE 381 RD + ERTLNK ++ V SELV+RVLR+C E RFFNW+R + Y PT++E+EE Sbjct: 53 RDFYPERTLNK--LNAPVTSELVFRVLRACSRSPTESLRFFNWSRAY---YTPTSIEYEE 107 Query: 382 LLKILALTR 408 L+KILA ++ Sbjct: 108 LIKILAKSK 116 >ref|XP_006400384.1| hypothetical protein EUTSA_v10013477mg [Eutrema salsugineum] gi|557101474|gb|ESQ41837.1| hypothetical protein EUTSA_v10013477mg [Eutrema salsugineum] Length = 461 Score = 89.7 bits (221), Expect = 4e-16 Identities = 52/114 (45%), Positives = 72/114 (63%), Gaps = 3/114 (2%) Frame = +1 Query: 67 SIFTF---VKSLTTGNNFVQGIGGSSNSRSLPNDDYFATIHHISNIVRRDIFMERTLNKM 237 SIFT V S+TT +F S+ + DYFA I+H+ NIVRR++ ER+LN++ Sbjct: 14 SIFTTDFTVSSVTTVRHFTSLEPLQSSDSTPTKGDYFAAINHVVNIVRREVHPERSLNRL 73 Query: 238 RISTIVNSELVYRVLRSCCSCGIECFRFFNWARTHHPNYDPTTLEFEELLKILA 399 R+ V SE V+RVLR+ + RFFNWAR+ PNY PT++E+E+L K LA Sbjct: 74 RLP--VTSEFVFRVLRATSRSANDSLRFFNWARS-SPNYTPTSIEYEQLAKSLA 124 >ref|XP_002871814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297317651|gb|EFH48073.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 459 Score = 88.2 bits (217), Expect = 1e-15 Identities = 51/112 (45%), Positives = 70/112 (62%), Gaps = 1/112 (0%) Frame = +1 Query: 67 SIFTFVKSLTTGNNFVQGIGGSSNSRSLPND-DYFATIHHISNIVRRDIFMERTLNKMRI 243 SIFT S+ + + +S S P DYFA I+H+ NIVRR+I ER+LN +R+ Sbjct: 14 SIFTVRTSIESSIRHFTSLEPLQSSDSTPTKGDYFAAINHVVNIVRREIHPERSLNSLRL 73 Query: 244 STIVNSELVYRVLRSCCSCGIECFRFFNWARTHHPNYDPTTLEFEELLKILA 399 V SE V+RVLR+ + RFFNWAR+ +P+Y PT++E+EEL K LA Sbjct: 74 P--VTSEFVFRVLRATSRSANDSLRFFNWARS-NPSYTPTSMEYEELAKSLA 122 >ref|XP_006479008.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like [Citrus sinensis] Length = 445 Score = 87.4 bits (215), Expect = 2e-15 Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 1/82 (1%) Frame = +1 Query: 157 DDYFATIHHISNIVRRDIFMERTLNKMRISTIVNSELVYRVLRSC-CSCGIECFRFFNWA 333 DDYFA ++HI+NIVR DI+ ERTLN++ ++ + SELVYRVLR C + E RFF WA Sbjct: 31 DDYFAAVNHIANIVRHDIYPERTLNRLNLT--LTSELVYRVLRVCHTTSPSESLRFFTWA 88 Query: 334 RTHHPNYDPTTLEFEELLKILA 399 R+ P Y PT+LEFE L+ LA Sbjct: 89 RS-QPQYSPTSLEFEPLILTLA 109 >ref|XP_006287650.1| hypothetical protein CARUB_v10000860mg, partial [Capsella rubella] gi|482556356|gb|EOA20548.1| hypothetical protein CARUB_v10000860mg, partial [Capsella rubella] Length = 477 Score = 86.7 bits (213), Expect = 3e-15 Identities = 52/127 (40%), Positives = 77/127 (60%), Gaps = 1/127 (0%) Frame = +1 Query: 22 RMFMFRKTSAPITRSSIFTFVKSLTTGNNFVQGIGGSSNSRSLPND-DYFATIHHISNIV 198 +MF+ R+ + + SIFT S+ + + +S S DYFA I+H+ NIV Sbjct: 18 KMFLLRRYTGG-SLYSIFTIRASIESSMRHFNSLEPLQSSDSTSTKGDYFAAINHVVNIV 76 Query: 199 RRDIFMERTLNKMRISTIVNSELVYRVLRSCCSCGIECFRFFNWARTHHPNYDPTTLEFE 378 RR+I ER+LN +R+ V SE V+RVLR+ + RFFNWAR+ +P+Y PT++E+E Sbjct: 77 RREIHPERSLNSLRLP--VTSEFVFRVLRATSRSANDSLRFFNWARS-NPSYTPTSMEYE 133 Query: 379 ELLKILA 399 +L K LA Sbjct: 134 QLAKSLA 140 >ref|NP_197340.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|223635760|sp|Q94JX6.2|PP391_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18390, mitochondrial; Flags: Precursor gi|332005166|gb|AED92549.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 459 Score = 84.3 bits (207), Expect = 1e-14 Identities = 43/80 (53%), Positives = 58/80 (72%) Frame = +1 Query: 160 DYFATIHHISNIVRRDIFMERTLNKMRISTIVNSELVYRVLRSCCSCGIECFRFFNWART 339 DYFA I+H+ NIVRR+I ER+LN +R+ V SE V+RVLR+ + RFFNWAR+ Sbjct: 46 DYFAAINHVVNIVRREIHPERSLNSLRLP--VTSEFVFRVLRATSRSSNDSLRFFNWARS 103 Query: 340 HHPNYDPTTLEFEELLKILA 399 +P+Y PT++E+EEL K LA Sbjct: 104 -NPSYTPTSMEYEELAKSLA 122