BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00027220
         (482 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004241813.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|XP_006353639.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containi...    86   4e-15
ref|XP_004292965.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
ref|XP_006476197.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    81   2e-13
gb|EMJ23233.1| hypothetical protein PRUPE_ppa003040mg [Prunus pe...    80   2e-13
gb|ESW33251.1| hypothetical protein PHAVU_001G055200g [Phaseolus...    77   2e-12
ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|XP_006450554.1| hypothetical protein CICLE_v10008018mg [Citr...    76   4e-12
ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_002308636.1| hypothetical protein POPTR_0006s26360g [Popu...    74   2e-11
gb|EXC20787.1| hypothetical protein L484_007369 [Morus notabilis]      73   4e-11
gb|EOY31375.1| Pentatricopeptide repeat (PPR) superfamily protei...    70   3e-10
gb|EOY31373.1| Pentatricopeptide repeat superfamily protein isof...    70   3e-10
gb|EOY31372.1| Pentatricopeptide repeat superfamily protein isof...    70   3e-10
ref|XP_002516618.1| pentatricopeptide repeat-containing protein,...    70   4e-10
ref|XP_006286475.1| hypothetical protein CARUB_v10000508mg [Caps...    67   3e-09
ref|XP_002871469.1| pentatricopeptide repeat-containing protein ...    66   5e-09
ref|XP_004498635.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
gb|EPS71242.1| hypothetical protein M569_03518 [Genlisea aurea]        65   1e-08

>ref|XP_004241813.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Solanum lycopersicum]
          Length = 602

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 41/83 (49%), Positives = 62/83 (74%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           +DFT +S++L DP + PGP LE A++ A I  +  + L++FN FDS+PKPLFTL+ W +K
Sbjct: 81  TDFTTLSEILRDPTIPPGPALENALDRAGIEVNECMFLQLFNHFDSSPKPLFTLYLWAEK 140

Query: 413 RSDYQFSIDVFNAMVNSLAKAQE 481
           +  ++FS+ VFNA+VN+L K +E
Sbjct: 141 KEWFKFSLPVFNAVVNALGKERE 163


>ref|XP_006353639.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Solanum tuberosum]
          Length = 604

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 38/83 (45%), Positives = 60/83 (72%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           +DFT + ++L DP +  GP LE A++ A +  +  + L++FN FDS+PKPLFTL+ W +K
Sbjct: 81  TDFTTLCEILRDPIIPAGPVLENALDRAGVEVNECMFLQLFNHFDSSPKPLFTLYLWAEK 140

Query: 413 RSDYQFSIDVFNAMVNSLAKAQE 481
           +  ++FS+ VFNA+VN+L K +E
Sbjct: 141 KEWFKFSLPVFNAVVNALGKERE 163


>ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial [Vitis vinifera]
           gi|296081989|emb|CBI20994.3| unnamed protein product
           [Vitis vinifera]
          Length = 597

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 40/82 (48%), Positives = 57/82 (69%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           SDF+ I  LL+DPAL  G  LE+A+N   I P   LL  IF+ FD++PKPLFTLF W  K
Sbjct: 70  SDFSTICALLTDPALSSGAPLEDALNRTGIKPCSGLLQAIFSHFDASPKPLFTLFRWAMK 129

Query: 413 RSDYQFSIDVFNAMVNSLAKAQ 478
           +  ++ S+ +FN+M++ LAK++
Sbjct: 130 QPGFESSMTLFNSMIDVLAKSR 151


>ref|XP_004292965.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 582

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 36/83 (43%), Positives = 61/83 (73%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           +DF+ I+KLL+DP++ PG  L  A++   I+PSP+L+  +F+ FDS+PK L TLF W ++
Sbjct: 55  NDFSTITKLLTDPSIFPGASLRSALDRVGIDPSPSLVQAVFDHFDSSPKLLHTLFVWAEE 114

Query: 413 RSDYQFSIDVFNAMVNSLAKAQE 481
           +  ++ S+ +F +++N LAKA+E
Sbjct: 115 QPGFRCSVKLFTSVINVLAKARE 137


>ref|XP_006476197.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g11310, mitochondrial-like [Citrus sinensis]
          Length = 551

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 37/83 (44%), Positives = 53/83 (63%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           +DF+ IS LL +PA+  GP LE  +N   + P P LLL +F  FD +PK L TLF W + 
Sbjct: 49  TDFSVISGLLRNPAISSGPSLESELNQTGVEPEPALLLAVFEHFDHSPKLLHTLFRWAES 108

Query: 413 RSDYQFSIDVFNAMVNSLAKAQE 481
           + +++ S  +FN M+  LAKA+E
Sbjct: 109 KPEFKCSAALFNCMIKVLAKAKE 131


>gb|EMJ23233.1| hypothetical protein PRUPE_ppa003040mg [Prunus persica]
          Length = 609

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 36/83 (43%), Positives = 56/83 (67%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           +DF+ I+ +L+DP++ PG  L+ A++   I P P LL  +F+ FDS+PK L TLF W +K
Sbjct: 82  NDFSTIANVLADPSISPGSSLQSALDRTGIEPGPCLLQAVFDHFDSSPKLLHTLFLWAEK 141

Query: 413 RSDYQFSIDVFNAMVNSLAKAQE 481
           R  ++ S  +F  M+N LAK++E
Sbjct: 142 RPGFRSSATLFGCMINVLAKSRE 164


>gb|ESW33251.1| hypothetical protein PHAVU_001G055200g [Phaseolus vulgaris]
          Length = 606

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/84 (45%), Positives = 57/84 (67%)
 Frame = +2

Query: 230 LSDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQ 409
           L+ F+ IS L +DP++ PGP L   ++ + I P P LLL +F+RF S+PK L +LF W Q
Sbjct: 79  LNAFSLISNLFTDPSVSPGPVLHAKLDRSAIEPDPALLLALFDRFGSSPKLLHSLFLWAQ 138

Query: 410 KRSDYQFSIDVFNAMVNSLAKAQE 481
            R  ++    +F+A+VN+LAKA+E
Sbjct: 139 TRPGFRPGPKLFDAVVNALAKAKE 162


>ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 622

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 38/78 (48%), Positives = 53/78 (67%)
 Frame = +2

Query: 248 ISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQKRSDYQ 427
           IS L +DP+L PGP L   ++ A I P P LLL +F+RF S+PK L +LF W Q R  ++
Sbjct: 96  ISNLFADPSLSPGPALHAELDRAGIEPDPALLLAVFDRFGSSPKLLHSLFLWAQTRPAFR 155

Query: 428 FSIDVFNAMVNSLAKAQE 481
               +F+A+VN+LAKA+E
Sbjct: 156 PGPKLFDAVVNALAKARE 173


>ref|XP_006450554.1| hypothetical protein CICLE_v10008018mg [Citrus clementina]
           gi|557553780|gb|ESR63794.1| hypothetical protein
           CICLE_v10008018mg [Citrus clementina]
          Length = 517

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 35/83 (42%), Positives = 52/83 (62%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           +DF+ IS LL + A+  GP LE  +N   + P P LLL +F  FD +PK L TLF W + 
Sbjct: 49  TDFSVISGLLRNTAISSGPSLESELNQTGVEPEPALLLAVFEHFDHSPKLLHTLFRWAES 108

Query: 413 RSDYQFSIDVFNAMVNSLAKAQE 481
           + +++ S  +FN ++  LAKA+E
Sbjct: 109 KPEFKCSAALFNCVIKVLAKAKE 131


>ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
           gi|449503560|ref|XP_004162063.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
          Length = 615

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 36/83 (43%), Positives = 58/83 (69%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           +D + IS +LSD +++PG  LE+A++   I PS +LL  +F+ FDS+PK L +LF W  K
Sbjct: 87  NDLSTISSILSDRSVRPGAALEDALDRTGIVPSSSLLEAVFDHFDSSPKFLHSLFLWAAK 146

Query: 413 RSDYQFSIDVFNAMVNSLAKAQE 481
           +S ++ S  +FN ++N LAK++E
Sbjct: 147 KSGFRPSAALFNRLINVLAKSRE 169


>ref|XP_002308636.1| hypothetical protein POPTR_0006s26360g [Populus trichocarpa]
           gi|222854612|gb|EEE92159.1| hypothetical protein
           POPTR_0006s26360g [Populus trichocarpa]
          Length = 607

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/83 (40%), Positives = 52/83 (62%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           +DF  +  +L DP +Q GP L  A++   I P   L+  +F+ FDS+PK L ++F W +K
Sbjct: 80  NDFFTLCNILKDPKIQLGPSLRTALDRTGIEPELGLIQSVFDHFDSSPKLLHSVFLWAEK 139

Query: 413 RSDYQFSIDVFNAMVNSLAKAQE 481
           +  +Q S  +FN+MVN L KA+E
Sbjct: 140 KPGFQSSAALFNSMVNFLGKARE 162


>gb|EXC20787.1| hypothetical protein L484_007369 [Morus notabilis]
          Length = 612

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 33/83 (39%), Positives = 57/83 (68%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           ++F  IS++L++P +  G  L  A++   I PSP+LL  +F+ FDS+PK L++LF W +K
Sbjct: 88  NEFAAISEVLTNPNISGGFSLHTALDRTGIEPSPSLLQAVFDHFDSSPKLLYSLFLWAEK 147

Query: 413 RSDYQFSIDVFNAMVNSLAKAQE 481
           +  Y+ S  +F +++N LAK++E
Sbjct: 148 QPGYRSSASLFASVINVLAKSRE 170


>gb|EOY31375.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 4, partial [Theobroma cacao]
           gi|508784121|gb|EOY31377.1| Pentatricopeptide repeat
           (PPR) superfamily protein, putative isoform 4, partial
           [Theobroma cacao]
          Length = 560

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/82 (42%), Positives = 52/82 (63%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           S+F+ IS LL +  +  G  LE A++  +I+P P LL  IF  FDS+PK L  LF W +K
Sbjct: 28  SNFSIISNLLKNSTITSGSSLESALDQTEIDPDPGLLQAIFECFDSSPKLLHHLFLWAEK 87

Query: 413 RSDYQFSIDVFNAMVNSLAKAQ 478
           +  ++ S  +F++MVN L KA+
Sbjct: 88  KPGFKSSATLFDSMVNVLGKAR 109


>gb|EOY31373.1| Pentatricopeptide repeat superfamily protein isoform 2, partial
           [Theobroma cacao]
          Length = 584

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/82 (42%), Positives = 52/82 (63%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           S+F+ IS LL +  +  G  LE A++  +I+P P LL  IF  FDS+PK L  LF W +K
Sbjct: 52  SNFSIISNLLKNSTITSGSSLESALDQTEIDPDPGLLQAIFECFDSSPKLLHHLFLWAEK 111

Query: 413 RSDYQFSIDVFNAMVNSLAKAQ 478
           +  ++ S  +F++MVN L KA+
Sbjct: 112 KPGFKSSATLFDSMVNVLGKAR 133


>gb|EOY31372.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|508784118|gb|EOY31374.1| Pentatricopeptide
           repeat superfamily protein isoform 1 [Theobroma cacao]
           gi|508784120|gb|EOY31376.1| Pentatricopeptide repeat
           superfamily protein isoform 1 [Theobroma cacao]
          Length = 595

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/82 (42%), Positives = 52/82 (63%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           S+F+ IS LL +  +  G  LE A++  +I+P P LL  IF  FDS+PK L  LF W +K
Sbjct: 63  SNFSIISNLLKNSTITSGSSLESALDQTEIDPDPGLLQAIFECFDSSPKLLHHLFLWAEK 122

Query: 413 RSDYQFSIDVFNAMVNSLAKAQ 478
           +  ++ S  +F++MVN L KA+
Sbjct: 123 KPGFKSSATLFDSMVNVLGKAR 144


>ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544438|gb|EEF45959.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 577

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/83 (40%), Positives = 55/83 (66%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           SDF+ +  LLSDP L+P   LE A++   I P  +LL  +F+ F+S+PK L +LF W  K
Sbjct: 59  SDFSTLCNLLSDPNLKP---LETALDQTGIKPETSLLNAVFDHFNSSPKLLHSLFVWADK 115

Query: 413 RSDYQFSIDVFNAMVNSLAKAQE 481
           + +++ S  +FN+++N+L K +E
Sbjct: 116 QPEFESSTTLFNSVINALGKMKE 138


>ref|XP_006286475.1| hypothetical protein CARUB_v10000508mg [Capsella rubella]
           gi|482555181|gb|EOA19373.1| hypothetical protein
           CARUB_v10000508mg [Capsella rubella]
          Length = 605

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/83 (37%), Positives = 51/83 (61%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           SD + IS LL +  + PG  LE A+N   I PS  L+  +F+RF S+P  L +++ W + 
Sbjct: 71  SDLSTISNLLENTDVAPGSSLEPALNETGIEPSVELVQALFDRFSSSPMLLHSVYKWAET 130

Query: 413 RSDYQFSIDVFNAMVNSLAKAQE 481
           R  +  S  +F++++N+L KA+E
Sbjct: 131 RPGFTLSPSLFDSVINALCKARE 153


>ref|XP_002871469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317306|gb|EFH47728.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 602

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
 Frame = +2

Query: 95  PLATTIAHRLSLLSTQSAFSIPIPPFLKLXXXXXXXXXXXXXISAL----SDFTRISKLL 262
           P    +  RL   S +S+  IP+ P ++              I+ L    +D + IS LL
Sbjct: 18  PHLNFLLRRLLSSSRRSSPLIPVEPLIQRLQSPAAHDSTPHQITVLDFSKTDLSTISNLL 77

Query: 263 SDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQKRSDYQFSIDV 442
            +  + PG  LE A++   I PS  L+  +F+R  S+P  L ++F W + +  +  S  +
Sbjct: 78  ENTNVVPGSSLESALDETGIEPSLQLVQALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSL 137

Query: 443 FNAMVNSLAKAQE 481
           F++++NSL KA+E
Sbjct: 138 FDSVINSLCKARE 150


>ref|XP_004498635.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cicer arietinum]
          Length = 596

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/83 (38%), Positives = 51/83 (61%)
 Frame = +2

Query: 233 SDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQK 412
           S+F+ IS L ++P++ PG  L   +N   I P   LL  +F+ F S+PK L +LF W  K
Sbjct: 69  SNFSLISTLFTNPSISPGSQLHAQLNRTGIKPDSPLLRAVFDHFASSPKLLHSLFLWADK 128

Query: 413 RSDYQFSIDVFNAMVNSLAKAQE 481
           +  ++    +F++MVN+LAK +E
Sbjct: 129 QPGFKPDPTLFDSMVNALAKIKE 151


>gb|EPS71242.1| hypothetical protein M569_03518 [Genlisea aurea]
          Length = 496

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/84 (41%), Positives = 53/84 (63%)
 Frame = +2

Query: 230 LSDFTRISKLLSDPALQPGPDLEEAINAAQINPSPNLLLEIFNRFDSTPKPLFTLFNWTQ 409
           ++ F+ IS+LLS        DLEEA+ +A+ +   N L+    RF S+ + L  L+NW Q
Sbjct: 1   MNAFSLISELLSKQGFVKDRDLEEALASAKFDSRRNYLI----RFGSSAEQLLPLYNWLQ 56

Query: 410 KRSDYQFSIDVFNAMVNSLAKAQE 481
           +R DY+FS+ V N MV+SLAK ++
Sbjct: 57  ERPDYEFSVAVLNGMVDSLAKDRQ 80