BLASTX nr result

ID: Rehmannia23_contig00027051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00027051
         (339 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006490233.1| PREDICTED: F-box protein At5g07610-like [Cit...    56   5e-12
ref|XP_006421543.1| hypothetical protein CICLE_v10005096mg [Citr...    56   2e-11
gb|EOY22796.1| F-box family protein, putative [Theobroma cacao]        46   2e-10
ref|XP_004240247.1| PREDICTED: F-box protein At5g07610-like [Sol...    45   7e-10
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    43   2e-08
ref|XP_004299772.1| PREDICTED: F-box protein At5g07610-like [Fra...    42   4e-07
gb|EOY10416.1| F-box family protein, putative [Theobroma cacao]        39   5e-06
ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus c...    42   5e-06

>ref|XP_006490233.1| PREDICTED: F-box protein At5g07610-like [Citrus sinensis]
          Length = 416

 Score = 56.2 bits (134), Expect(2) = 5e-12
 Identities = 35/72 (48%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
 Frame = +3

Query: 144 NRAIHWTSYGLGDSLYFNIDDQMLRIMPIPPIGG-----NNYYFEVSCDHLHFIVETIYS 308
           N AIHW S   G SLYF++D + LR MP+PPI        + YF  S  HLH I   IY 
Sbjct: 239 NGAIHWVSTH-GSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGESRGHLHLI--EIYG 295

Query: 309 P--IVFNVYEMR 338
           P   +FNVYEM+
Sbjct: 296 PCTALFNVYEMK 307



 Score = 40.0 bits (92), Expect(2) = 5e-12
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +1

Query: 22  IHGMNLAFDPAKSPHYKVFCLRKLE 96
           I G+NLAFDP+KS HYKV C+R  +
Sbjct: 174 IFGVNLAFDPSKSAHYKVICVRNCD 198


>ref|XP_006421543.1| hypothetical protein CICLE_v10005096mg [Citrus clementina]
           gi|557523416|gb|ESR34783.1| hypothetical protein
           CICLE_v10005096mg [Citrus clementina]
          Length = 403

 Score = 56.2 bits (134), Expect(2) = 2e-11
 Identities = 35/72 (48%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
 Frame = +3

Query: 144 NRAIHWTSYGLGDSLYFNIDDQMLRIMPIPPIGG-----NNYYFEVSCDHLHFIVETIYS 308
           N AIHW S   G SLYF++D + LR MP+PPI        + YF  S  HLH I   IY 
Sbjct: 226 NGAIHWVSTH-GSSLYFDVDQEKLREMPMPPIPDEWEERRHQYFGESRGHLHLI--EIYG 282

Query: 309 P--IVFNVYEMR 338
           P   +FNVYEM+
Sbjct: 283 PCTALFNVYEMK 294



 Score = 38.1 bits (87), Expect(2) = 2e-11
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +1

Query: 22  IHGMNLAFDPAKSPHYKVFCL 84
           I G+NLAFDP+KS HYKV C+
Sbjct: 174 IFGVNLAFDPSKSAHYKVICI 194


>gb|EOY22796.1| F-box family protein, putative [Theobroma cacao]
          Length = 407

 Score = 45.8 bits (107), Expect(2) = 2e-10
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
 Frame = +3

Query: 144 NRAIHWTSYGLGDSLYFNIDDQMLRIMPIPPIGGN---NYYFEVSCDHLHFIVETIYSPI 314
           N A+HW S   GDSL F+++++ +R +P+ P+ G+     YF  S  HLH I       +
Sbjct: 232 NGALHWLS-DWGDSLCFDVEEERIRDLPMAPVVGDVRLYRYFGQSGGHLHLIEVYGSDTL 290

Query: 315 VFNVYEM 335
            F+VYEM
Sbjct: 291 QFDVYEM 297



 Score = 44.7 bits (104), Expect(2) = 2e-10
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +1

Query: 28  GMNLAFDPAKSPHYKVFCLRKLELDRPE 111
           G++LAFDP+KSPHYKV C+R  + D P+
Sbjct: 169 GVSLAFDPSKSPHYKVICIRNCDSDLPD 196


>ref|XP_004240247.1| PREDICTED: F-box protein At5g07610-like [Solanum lycopersicum]
          Length = 383

 Score = 45.4 bits (106), Expect(2) = 7e-10
 Identities = 31/70 (44%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
 Frame = +3

Query: 144 NRAIHWTS-YGLGDSLYFNIDDQMLRIMPIPPI----GGNNYYFEVSCDHLHFIVETIYS 308
           N +I+W S  G    LYFN D + LRIMP+P      G    YF  S  HLH    + Y+
Sbjct: 221 NGSIYWISTIGNLTCLYFNFDFESLRIMPMPHFPDDQGTTITYFGESFGHLHLTKISFYT 280

Query: 309 PIVFNVYEMR 338
            I F+VYEMR
Sbjct: 281 -IRFDVYEMR 289



 Score = 43.5 bits (101), Expect(2) = 7e-10
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +1

Query: 22  IHGMNLAFDPAKSPHYKVFCLR 87
           IHG++LAFDP KSPHYKV C+R
Sbjct: 159 IHGISLAFDPLKSPHYKVICVR 180


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 43.1 bits (100), Expect(2) = 2e-08
 Identities = 31/72 (43%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
 Frame = +3

Query: 144 NRAIHWTSYGLGDSLYFNIDDQMLRIMPIPPIGGNNY------YFEVSCDHLHFIVETIY 305
           N A+HW S   G SLYF ID+  +  MP PP G   +      +F  S  HLH I   IY
Sbjct: 234 NGAVHWISPS-GASLYFGIDEGRIDTMPPPPPGPGGWGKRRIRHFGESGGHLHII--EIY 290

Query: 306 SP--IVFNVYEM 335
            P    F VYEM
Sbjct: 291 GPRTTQFVVYEM 302



 Score = 41.2 bits (95), Expect(2) = 2e-08
 Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
 Frame = +1

Query: 1   PKLKGGG---IHGMNLAFDPAKSPHYKVFCLRKLEL 99
           P    GG   + G+NLAFDP+KSP+Y V C+R  E+
Sbjct: 160 PPCSSGGRDTVFGINLAFDPSKSPYYSVICVRSCEV 195


>ref|XP_004299772.1| PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp.
           vesca]
          Length = 421

 Score = 42.4 bits (98), Expect(2) = 4e-07
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
 Frame = +3

Query: 126 LS*RKP---NRAIHWTSYGLGDSLYFNIDDQMLRIMPIPPIG--GNNYYFEVSCDHLHFI 290
           +S R+P    RAIHW S     SLY+++D + L  MP+PP    G   YF  S  HLH I
Sbjct: 243 ISFREPVFCRRAIHWYS-DRQTSLYYDVDKECLNPMPMPPSSTYGTVNYFGESGGHLHLI 301

Query: 291 VETIYSPIVFNV 326
           +  +    VF +
Sbjct: 302 MSYVLELDVFEL 313



 Score = 37.0 bits (84), Expect(2) = 4e-07
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +1

Query: 22  IHGMNLAFDPAKSPHYKVFCLRKLELD 102
           I  +NLAFDP  SP+YK+ C+ K  LD
Sbjct: 190 ILALNLAFDPLHSPYYKILCILKKNLD 216


>gb|EOY10416.1| F-box family protein, putative [Theobroma cacao]
          Length = 393

 Score = 39.3 bits (90), Expect(2) = 5e-06
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
 Frame = +3

Query: 144 NRAIHWTSYGLGDSLYFNIDDQMLRIMPIP---------PIGGNNYYFEVSCDHLHFIVE 296
           N AIHW   G   SLY ++++  L+ MP+P           G +N +   S  HLH  V 
Sbjct: 217 NGAIHWEG-GDRSSLYLDVENMCLKAMPMPARMLDAPEGSYGESNRFLGESRGHLHLTVN 275

Query: 297 TIYSPIV--FNVYEM 335
             Y P+   FN++EM
Sbjct: 276 --YKPLCLQFNIFEM 288



 Score = 36.6 bits (83), Expect(2) = 5e-06
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = +1

Query: 16  GGIHGMNLAFDPAKSPHYKVFCLRKL 93
           G ++ +NLAFDP KS HYK+  +R+L
Sbjct: 151 GFVYAVNLAFDPLKSVHYKIISIRRL 176


>ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus communis]
           gi|223550115|gb|EEF51602.1| hypothetical protein
           RCOM_1501190 [Ricinus communis]
          Length = 332

 Score = 41.6 bits (96), Expect(2) = 5e-06
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
 Frame = +3

Query: 144 NRAIHWTSYGLGDSLYFNIDDQMLRIMPIPPIGGNNY-----YFEVSCDHLHFIVETIYS 308
           N AIHW +   G S  F++D + +R MP+PPI  + Y     YF  S  HL+ I    ++
Sbjct: 154 NGAIHWYTDS-GPSFCFDVDQEQIREMPMPPIPDDWYRRRVIYFGESGGHLNLIEIYHHA 212

Query: 309 PIVFNVYEM 335
              FNV E+
Sbjct: 213 ATQFNVCEL 221



 Score = 34.3 bits (77), Expect(2) = 5e-06
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +1

Query: 31  MNLAFDPAKSPHYKVFCLRKLELDRPE 111
           ++ AFDPA+S HYKV C  + E+  P+
Sbjct: 92  LDSAFDPARSRHYKVICTCQYEISEPD 118


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