BLASTX nr result

ID: Rehmannia23_contig00026817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00026817
         (462 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362231.1| PREDICTED: non-structural maintenance of chr...    59   7e-07
ref|XP_004249168.1| PREDICTED: non-structural maintenance of chr...    58   1e-06

>ref|XP_006362231.1| PREDICTED: non-structural maintenance of chromosomes element 4
           homolog A-like [Solanum tuberosum]
          Length = 400

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 12/81 (14%)
 Frame = +2

Query: 254 MVRTVKKEMVN--GSSRITRRSAQNTNEEQST----PNNSRADDGAVE------RRVLRS 397
           MVR VK+E V+  G+   TRR+     E  +     P+NS  ++ +VE      RRVLRS
Sbjct: 1   MVRAVKREPVSTPGNGAKTRRNGAAAAEAVAAAVAGPSNSNNNNSSVEEETIIGRRVLRS 60

Query: 398 KYLRFKNRISDERDDMSKVDS 460
            YL FKNRISDERD++S VDS
Sbjct: 61  HYLNFKNRISDERDNISTVDS 81


>ref|XP_004249168.1| PREDICTED: non-structural maintenance of chromosome element 4-like
           [Solanum lycopersicum]
          Length = 400

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 12/81 (14%)
 Frame = +2

Query: 254 MVRTVKKEMVN--GSSRITRRSAQNTNEEQST----PNNSRADDGAVE------RRVLRS 397
           MVR VK+E V+  G+   TRR+A    E  +     P+N   ++ +VE      RRVLRS
Sbjct: 1   MVRAVKREPVDTQGNGVKTRRNAAAAAEAVAAAVAGPSNRNNNNSSVEEETIVGRRVLRS 60

Query: 398 KYLRFKNRISDERDDMSKVDS 460
            YL FKNRISDERD++S VDS
Sbjct: 61  HYLNFKNRISDERDNISTVDS 81


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