BLASTX nr result

ID: Rehmannia23_contig00026457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00026457
         (731 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                67   5e-09
gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1...    57   8e-06

>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 44/155 (28%), Positives = 71/155 (45%)
 Frame = -1

Query: 467 MAPMISLIRDLNMTKTRWVVKLRLIRLYEKPAYNDKNQIQSLECVFHDIEVXXXXXXXXX 288
           MAP+  L RD++   T   +K+RLIR YE P       I+  EC+FHD E          
Sbjct: 1   MAPLYILGRDISPMNTTSAIKVRLIRSYEVPERRGAASIKCQECIFHDKE---------- 50

Query: 287 XXXXXXXXXXXXXXXLFQGDRIQGTVRRFQIDQFKKILKEGRVYAIREFIVANQTDKYKA 108
                             G  +   + +  ++++  +LK G+VY+IR F+V +    YK 
Sbjct: 51  ------------------GTVLHVNIPKEFVEKYSAMLKIGQVYSIRNFLVISNFYTYKT 92

Query: 107 TTTKRKIFFHGRTHIFEMFDNSFPRFMFNFKNFSE 3
           +  K  + F+ +T + E+ D  FP  MF  +  S+
Sbjct: 93  SPHKYMLKFYYKTVVRELKDIVFPSHMFRLQPLSQ 127


>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein
           [Beta vulgaris subsp. vulgaris]
          Length = 2037

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 38/148 (25%), Positives = 64/148 (43%)
 Frame = -1

Query: 446 IRDLNMTKTRWVVKLRLIRLYEKPAYNDKNQIQSLECVFHDIEVXXXXXXXXXXXXXXXX 267
           + D+   K  W +K+R+IRL++ P++ +  +  S+E VF + +                 
Sbjct: 39  VGDITPIKDSWNIKIRIIRLWKTPSFANPTEDGSIEMVFLNEK----------------- 81

Query: 266 XXXXXXXXLFQGDRIQGTVRRFQIDQFKKILKEGRVYAIREFIVANQTDKYKATTTKRKI 87
                      GD+IQ  V++  I +F  +L EG++  I  F VA     Y+ T+   KI
Sbjct: 82  -----------GDKIQAIVKKLLIRRFSHLLAEGQLRVINNFGVAQNNGSYRLTSHPYKI 130

Query: 86  FFHGRTHIFEMFDNSFPRFMFNFKNFSE 3
            F   T +    D   P    NF +F +
Sbjct: 131 NFLLNTRVQNCDDLPIPLHGLNFASFDD 158


Top